BLASTX nr result

ID: Atractylodes21_contig00016054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016054
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [...   121   5e-26
ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [...   120   9e-26
emb|CAN80537.1| hypothetical protein VITISV_003812 [Vitis vinifera]   120   9e-26
ref|XP_004145258.1| PREDICTED: 60S acidic ribosomal protein P0-2...   120   2e-25
gb|ADR71235.1| 60S acidic ribosomal protein P0A [Hevea brasilien...   118   6e-25

>ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/105 (59%), Positives = 81/105 (77%)
 Frame = +3

Query: 27  SKAVRKVIHHQKLRNHLKDHTQILIVGADNLRANQIQVIRQGLRGESEVVMGKNSLMRRS 206
           SKA +K+ + QKL   L +++QILI  ADN+ +NQ+Q IR+GLRG+S V+MGKN++M+RS
Sbjct: 6   SKADKKIAYDQKLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRS 65

Query: 207 IAIHAPATGNTAFLGLISHIVGKVGLVFTAGDPNEVSEAVAGYKL 341
           I +HA  TGNTAFL LI  +VG VGL+FT GD  EVSE VA YK+
Sbjct: 66  IRLHAEKTGNTAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKV 110


>ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/105 (59%), Positives = 80/105 (76%)
 Frame = +3

Query: 27  SKAVRKVIHHQKLRNHLKDHTQILIVGADNLRANQIQVIRQGLRGESEVVMGKNSLMRRS 206
           SKA +K+ + QKL   L ++TQILI  ADN+ +NQ+Q IR+GLRG+S V+MGKN++M+RS
Sbjct: 6   SKADKKIAYDQKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRS 65

Query: 207 IAIHAPATGNTAFLGLISHIVGKVGLVFTAGDPNEVSEAVAGYKL 341
           I +HA  TGN AFL LI  +VG VGL+FT GD  EVSE VA YK+
Sbjct: 66  IRLHAEKTGNQAFLNLIPLLVGNVGLIFTRGDLKEVSEEVAKYKV 110


>emb|CAN80537.1| hypothetical protein VITISV_003812 [Vitis vinifera]
          Length = 320

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/105 (59%), Positives = 80/105 (76%)
 Frame = +3

Query: 27  SKAVRKVIHHQKLRNHLKDHTQILIVGADNLRANQIQVIRQGLRGESEVVMGKNSLMRRS 206
           SKA +K+ + QKL   L ++TQILI  ADN+ +NQ+Q IR+GLRG+S V+MGKN++M+RS
Sbjct: 6   SKADKKIAYDQKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRS 65

Query: 207 IAIHAPATGNTAFLGLISHIVGKVGLVFTAGDPNEVSEAVAGYKL 341
           I +HA  TGN AFL LI  +VG VGL+FT GD  EVSE VA YK+
Sbjct: 66  IRLHAEKTGNQAFLNLIPLLVGNVGLIFTRGDLKEVSEEVAKYKV 110


>ref|XP_004145258.1| PREDICTED: 60S acidic ribosomal protein P0-2-like [Cucumis sativus]
           gi|449470509|ref|XP_004152959.1| PREDICTED: 60S acidic
           ribosomal protein P0-2-like [Cucumis sativus]
           gi|449523077|ref|XP_004168551.1| PREDICTED: 60S acidic
           ribosomal protein P0-2-like [Cucumis sativus]
          Length = 320

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/110 (53%), Positives = 83/110 (75%)
 Frame = +3

Query: 12  VVLMASKAVRKVIHHQKLRNHLKDHTQILIVGADNLRANQIQVIRQGLRGESEVVMGKNS 191
           +VL  ++A +K  + QKL   L +++Q+LIVGADN+ +NQ+Q IR+GLRG+S ++MGKN+
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 192 LMRRSIAIHAPATGNTAFLGLISHIVGKVGLVFTAGDPNEVSEAVAGYKL 341
           +M+RSI IH+  TGNTA   L+ H+VG VGL+FT GD  EV E VA YK+
Sbjct: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKV 110


>gb|ADR71235.1| 60S acidic ribosomal protein P0A [Hevea brasiliensis]
          Length = 320

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/105 (57%), Positives = 80/105 (76%)
 Frame = +3

Query: 27  SKAVRKVIHHQKLRNHLKDHTQILIVGADNLRANQIQVIRQGLRGESEVVMGKNSLMRRS 206
           SKA +K+ +  KL   L +++QILIV ADN+ +NQ+Q IRQGLRG+S V+MGKN++M+R+
Sbjct: 6   SKADKKIAYDAKLCQLLDEYSQILIVAADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRT 65

Query: 207 IAIHAPATGNTAFLGLISHIVGKVGLVFTAGDPNEVSEAVAGYKL 341
           I +H+  TGNTAFL LI  + G VGL+FT GD  EVSE VA YK+
Sbjct: 66  IRVHSEKTGNTAFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKV 110


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