BLASTX nr result

ID: Atractylodes21_contig00016049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016049
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplasti...   126   3e-27
emb|CBI37094.3| unnamed protein product [Vitis vinifera]              126   3e-27
ref|NP_180685.1| CDT1A-like protein [Arabidopsis thaliana] gi|75...   103   3e-20
emb|CAD13172.2| CDT1a protein [Arabidopsis thaliana]                  102   7e-20
ref|XP_002879314.1| hypothetical protein ARALYDRAFT_482053 [Arab...   101   1e-19

>ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Vitis vinifera]
          Length = 646

 Score =  126 bits (317), Expect = 3e-27
 Identities = 80/179 (44%), Positives = 108/179 (60%), Gaps = 6/179 (3%)
 Frame = -2

Query: 519 TGVSSSAYDSFKSKKVLDSSSVNKPQSSNQSLEASKQSPWSSKTPEKXXXXXXXXXXXRQ 340
           T +S+SA++ FKSKK+  SSS           +A    PWSSKTPEK             
Sbjct: 68  TTMSASAFNPFKSKKIAKSSS------KVDQTKAPDHDPWSSKTPEKPALPPRRGRNGSV 121

Query: 339 SLRSVNQVREAAKQLRKSDLQPSVSPDQL----TSSASPTQTPITKTNTSKA--LPEKYE 178
           +L S+ +V++ A  L KS    S     +    T+S  P  +P  + N +++  LPEKYE
Sbjct: 122 AL-SIKEVKQMATTLTKSAPVQSARTAPVGSARTASVDPVASPSRQKNVNRSMKLPEKYE 180

Query: 177 ILEKFFNSLESSIRLLGLKRSMSTFTNISRMVESLTDRRFAYSHLAQLKFILPDEIEIK 1
           +L +FF+SL+SSIRLL LK SMSTFTNI   +E LTDRRF++ +LAQLK+ILP+ I IK
Sbjct: 181 MLAQFFDSLDSSIRLLRLKGSMSTFTNICPKIECLTDRRFSHGNLAQLKYILPEAIVIK 239


>emb|CBI37094.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  126 bits (317), Expect = 3e-27
 Identities = 80/179 (44%), Positives = 108/179 (60%), Gaps = 6/179 (3%)
 Frame = -2

Query: 519 TGVSSSAYDSFKSKKVLDSSSVNKPQSSNQSLEASKQSPWSSKTPEKXXXXXXXXXXXRQ 340
           T +S+SA++ FKSKK+  SSS           +A    PWSSKTPEK             
Sbjct: 75  TTMSASAFNPFKSKKIAKSSS------KVDQTKAPDHDPWSSKTPEKPALPPRRGRNGSV 128

Query: 339 SLRSVNQVREAAKQLRKSDLQPSVSPDQL----TSSASPTQTPITKTNTSKA--LPEKYE 178
           +L S+ +V++ A  L KS    S     +    T+S  P  +P  + N +++  LPEKYE
Sbjct: 129 AL-SIKEVKQMATTLTKSAPVQSARTAPVGSARTASVDPVASPSRQKNVNRSMKLPEKYE 187

Query: 177 ILEKFFNSLESSIRLLGLKRSMSTFTNISRMVESLTDRRFAYSHLAQLKFILPDEIEIK 1
           +L +FF+SL+SSIRLL LK SMSTFTNI   +E LTDRRF++ +LAQLK+ILP+ I IK
Sbjct: 188 MLAQFFDSLDSSIRLLRLKGSMSTFTNICPKIECLTDRRFSHGNLAQLKYILPEAIVIK 246


>ref|NP_180685.1| CDT1A-like protein [Arabidopsis thaliana]
           gi|75206335|sp|Q9SJW9.1|CDT1A_ARATH RecName:
           Full=CDT1-like protein a, chloroplastic; Short=AtCDT1a;
           Flags: Precursor gi|4432822|gb|AAD20672.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330253422|gb|AEC08516.1| CDT1A-like protein
           [Arabidopsis thaliana]
          Length = 571

 Score =  103 bits (256), Expect = 3e-20
 Identities = 76/176 (43%), Positives = 103/176 (58%), Gaps = 7/176 (3%)
 Frame = -2

Query: 507 SSAYDSFKSKK--VLDSSSVNKPQSSNQSLEASKQSPWSSKTPEKXXXXXXXXXXXRQSL 334
           SS    FKSKK  V+DS S +K Q+ N +      S  +  TPEK           R   
Sbjct: 6   SSRSIPFKSKKRLVMDSPS-SKSQTGNPN-----PSSVALPTPEKPLENMLSRSRNRSVA 59

Query: 333 RSVNQVREAAKQLRKS-DLQPSVSPDQL---TSSASPTQTPITKTNTSKA-LPEKYEILE 169
            SV ++R+AA   R+S D   S +  +L   +SS+SP++   +  N  K  LPEKYE L 
Sbjct: 60  LSVKEIRQAAGSRRRSEDPVASSAKSRLFFDSSSSSPSKRKSSNKNAEKEKLPEKYENLG 119

Query: 168 KFFNSLESSIRLLGLKRSMSTFTNISRMVESLTDRRFAYSHLAQLKFILPDEIEIK 1
           KFF +L++S+ L  L+ S  TF+NIS+ +E LT+RRF YSHLAQ+K ILP+ IEIK
Sbjct: 120 KFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILPEAIEIK 175


>emb|CAD13172.2| CDT1a protein [Arabidopsis thaliana]
          Length = 571

 Score =  102 bits (253), Expect = 7e-20
 Identities = 75/176 (42%), Positives = 103/176 (58%), Gaps = 7/176 (3%)
 Frame = -2

Query: 507 SSAYDSFKSKK--VLDSSSVNKPQSSNQSLEASKQSPWSSKTPEKXXXXXXXXXXXRQSL 334
           SS    FKSKK  V+DS S +K Q+ N +      S  +  TPEK           R   
Sbjct: 6   SSRSIPFKSKKRLVMDSPS-SKSQTGNPN-----PSSVALPTPEKPLENMLSRSRNRSVA 59

Query: 333 RSVNQVREAAKQLRKS-DLQPSVSPDQL---TSSASPTQTPITKTNTSKA-LPEKYEILE 169
            SV ++R+AA   R+S D   S +  +L   +SS+SP++   +  N  K  LPE+YE L 
Sbjct: 60  LSVKEIRQAAGSRRRSEDPVASSAKSRLFFDSSSSSPSKRKSSNKNAEKEKLPERYENLG 119

Query: 168 KFFNSLESSIRLLGLKRSMSTFTNISRMVESLTDRRFAYSHLAQLKFILPDEIEIK 1
           KFF +L++S+ L  L+ S  TF+NIS+ +E LT+RRF YSHLAQ+K ILP+ IEIK
Sbjct: 120 KFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILPEAIEIK 175


>ref|XP_002879314.1| hypothetical protein ARALYDRAFT_482053 [Arabidopsis lyrata subsp.
           lyrata] gi|297325153|gb|EFH55573.1| hypothetical protein
           ARALYDRAFT_482053 [Arabidopsis lyrata subsp. lyrata]
          Length = 575

 Score =  101 bits (251), Expect = 1e-19
 Identities = 77/179 (43%), Positives = 102/179 (56%), Gaps = 10/179 (5%)
 Frame = -2

Query: 507 SSAYDSFKSKK--VLDSSSVNKPQSSNQSLEASKQSPWSSKTPEKXXXXXXXXXXXRQSL 334
           SS    FKSKK  V+DS S +K Q+ N     S  S  +  TPEK           R   
Sbjct: 6   SSRSIPFKSKKRLVMDSPS-SKSQTGN-----SNPSSVALPTPEKPLENMLSRSRNRSVA 59

Query: 333 RSVNQVREAAKQLRKS-DLQPSVSPDQL------TSSASPTQTPITKTNTSKA-LPEKYE 178
            SV ++R+AA   R+S D   S +  +L      +SS+SP++   +  N  K  LPEKYE
Sbjct: 60  LSVKEIRQAAGSRRRSEDPVASSAKSKLFFSHNDSSSSSPSKRVSSNKNAEKEKLPEKYE 119

Query: 177 ILEKFFNSLESSIRLLGLKRSMSTFTNISRMVESLTDRRFAYSHLAQLKFILPDEIEIK 1
            L KFF +L++SI L  L+ S  TF+NIS+ +E LT+RRF YSHLAQ+K IL + IEIK
Sbjct: 120 NLGKFFEALDNSISLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILREAIEIK 178


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