BLASTX nr result

ID: Atractylodes21_contig00016030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016030
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   137   2e-30
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...   135   5e-30
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   125   9e-27
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   122   4e-26
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   107   1e-21

>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score =  137 bits (345), Expect = 2e-30
 Identities = 66/122 (54%), Positives = 88/122 (72%), Gaps = 5/122 (4%)
 Frame = -2

Query: 637 EDFDCFMSERTVKLEVYRLDIEEQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNCV 458
           +D   +MSERTV+ +V++L+ E + W+EVK+L DR+LFLGD+  FSASA E  GCKGNC+
Sbjct: 278 QDLVQYMSERTVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCI 337

Query: 457 FFTGQ---SRE--DDGLMKSRGVGVFDLESGCIGPIANNSGYSQLFWPPPSWIHPNSVAL 293
           FF      SRE  DDG M  R +GVF+LESGCIGP+ N   YS++FWPPP WI   S+ +
Sbjct: 338 FFEDNFFYSREEGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWIASTSLEV 397

Query: 292 ED 287
           ++
Sbjct: 398 QN 399


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  135 bits (341), Expect = 5e-30
 Identities = 62/114 (54%), Positives = 82/114 (71%), Gaps = 11/114 (9%)
 Frame = -2

Query: 622 FMSERTVKLEVYRLDIEEQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNCVFFTGQ 443
           +MSERTV+ +V++LD E Q W+EVKSLGDR+LFLGD+  FSAS  +  GCKGNC+FF   
Sbjct: 222 YMSERTVRFKVFKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFFVDN 281

Query: 442 ---SRE--------DDGLMKSRGVGVFDLESGCIGPIANNSGYSQLFWPPPSWI 314
              SR+        DDG++  R +GVFDLE+GCIGP+ N   Y+++FWPPP W+
Sbjct: 282 FFYSRDENLRANGGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKMFWPPPHWL 335


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score =  125 bits (313), Expect = 9e-27
 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 5/118 (4%)
 Frame = -2

Query: 637 EDFDCFMSERTVKLEVYRLDIEEQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNCV 458
           +D   +MSERTV  +V++L+ E + W+EV  L DR+LFLGD+  FSASA E  GCKGNC+
Sbjct: 278 QDLVQYMSERTVWFKVFKLNEEGKCWIEVNDLEDRVLFLGDDLTFSASASELSGCKGNCI 337

Query: 457 FFT-----GQSREDDGLMKSRGVGVFDLESGCIGPIANNSGYSQLFWPPPSWIHPNSV 299
           FF       +   DDG +  R +GVF+LESGCIGP+ N    S++FWPPP W+   S+
Sbjct: 338 FFNDDFFYSRGEGDDGSLFGRDIGVFELESGCIGPLRNFPDNSKMFWPPPDWVASTSL 395


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 4/111 (3%)
 Frame = -2

Query: 622 FMSERTVKLEVYRLDIEEQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNCVFFTGQ 443
           +M ER +  +V+RLD  EQKWVE++SLGDR+LFLGD+  FSA A +F GCKGN + FT  
Sbjct: 274 WMIERMIHFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSICFTNI 333

Query: 442 S----REDDGLMKSRGVGVFDLESGCIGPIANNSGYSQLFWPPPSWIHPNS 302
           S     E+D   +S  +GVFDL+SG IGP+++ + YS+  WPPP+W+   S
Sbjct: 334 SFFSDAEEDDASRSGTIGVFDLDSGSIGPLSSYANYSKTIWPPPAWVSSTS 384


>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
 Frame = -2

Query: 619 MSERTVKLEVYRLDIE-EQKWVEVKSLGDRMLFLGDNCGFSASALEFPGCKGNCVFFTG- 446
           + E+TV  +V++L     +KW  V  LG+ MLFLG+NC FSASA    GCKGNC+FFT  
Sbjct: 277 LHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASASGVSGCKGNCIFFTDG 336

Query: 445 ---QSREDDGLMKSRGVGVFDLESGCIGPIANNSGYSQLFWPPPSWIHPNS 302
               + ++D + K   + +FDLE G I P++++  YS+LFWPPPSWI   S
Sbjct: 337 FLCPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPPPSWITSTS 387


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