BLASTX nr result

ID: Atractylodes21_contig00015982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015982
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatu...   158   8e-37
ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays] gi|2265...   157   2e-36
ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycin...   156   2e-36
ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [C...   154   9e-36
ref|XP_003566477.1| PREDICTED: 50S ribosomal protein L18-like [B...   154   2e-35

>ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355481757|gb|AES62960.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 114

 Score =  158 bits (399), Expect = 8e-37
 Identities = 84/116 (72%), Positives = 92/116 (79%)
 Frame = +3

Query: 96  MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXXQEKALREAWNKS 275
           MVIPPPV+  R+T YLKPY+LKMHF+NKYVSAQVIH P          QEKALR     S
Sbjct: 1   MVIPPPVRPPRLTQYLKPYVLKMHFTNKYVSAQVIHTPTATVASSASSQEKALRS----S 56

Query: 276 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVKAVIDSLREAGVK 443
            ++TRDVAAAAKIGKLL ERL LKDIPAVSV  K+EQRYHGKVKAVIDSLREAGV+
Sbjct: 57  LETTRDVAAAAKIGKLLAERLSLKDIPAVSVHLKREQRYHGKVKAVIDSLREAGVR 112


>ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays]
           gi|226510381|ref|NP_001150322.1| 50S ribosomal protein
           L18 [Zea mays] gi|195608440|gb|ACG26050.1| 50S ribosomal
           protein L18 [Zea mays] gi|195609138|gb|ACG26399.1| 50S
           ribosomal protein L18 [Zea mays]
           gi|195638354|gb|ACG38645.1| 50S ribosomal protein L18
           [Zea mays] gi|195652601|gb|ACG45768.1| 50S ribosomal
           protein L18 [Zea mays] gi|223943857|gb|ACN26012.1|
           unknown [Zea mays] gi|414588054|tpg|DAA38625.1| TPA: 50S
           ribosomal protein L18 isoform 1 [Zea mays]
           gi|414588055|tpg|DAA38626.1| TPA: 50S ribosomal protein
           L18 isoform 2 [Zea mays]
          Length = 114

 Score =  157 bits (396), Expect = 2e-36
 Identities = 81/116 (69%), Positives = 92/116 (79%)
 Frame = +3

Query: 96  MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXXQEKALREAWNKS 275
           MVIPPP +A R+T +LKPYLL+MHFSNKYVSAQV+H P          QEK LR     +
Sbjct: 1   MVIPPPARAARVTRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRP----N 56

Query: 276 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVKAVIDSLREAGVK 443
            +STRDVAAAAKIGKLLGERLLLK IPAVS+  K+EQ+YHGKVKAVIDS+REAGVK
Sbjct: 57  MESTRDVAAAAKIGKLLGERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVK 112


>ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycine max]
           gi|255631236|gb|ACU15985.1| unknown [Glycine max]
          Length = 114

 Score =  156 bits (395), Expect = 2e-36
 Identities = 82/116 (70%), Positives = 93/116 (80%)
 Frame = +3

Query: 96  MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXXQEKALREAWNKS 275
           MVIPPPV+  RIT +LKPY+LKMHF+NKYVSAQVIH P          QEKALR     S
Sbjct: 1   MVIPPPVRPPRITQFLKPYVLKMHFTNKYVSAQVIHTPTATVVSSASSQEKALRS----S 56

Query: 276 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVKAVIDSLREAGVK 443
            +++RDVAAAAKIGK+L ERLLLKDIPAVSV  K+EQ+YHGKVKAVIDS+REAGVK
Sbjct: 57  LETSRDVAAAAKIGKILAERLLLKDIPAVSVHLKREQKYHGKVKAVIDSIREAGVK 112


>ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
           gi|449480883|ref|XP_004156021.1| PREDICTED: 50S
           ribosomal protein L18-like [Cucumis sativus]
          Length = 114

 Score =  154 bits (390), Expect = 9e-36
 Identities = 81/116 (69%), Positives = 92/116 (79%)
 Frame = +3

Query: 96  MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXXQEKALREAWNKS 275
           MVIPPP+K  R+T YLKPY+LKMHF+NK+VSAQVIH+           QEKAL+     S
Sbjct: 1   MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQS----S 56

Query: 276 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVKAVIDSLREAGVK 443
            +STRDVAAAAKIGKLLGERLLLK IPAV V  K+EQRYHGKVKAVIDS+REAG+K
Sbjct: 57  MESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIK 112


>ref|XP_003566477.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
          Length = 114

 Score =  154 bits (388), Expect = 2e-35
 Identities = 81/116 (69%), Positives = 91/116 (78%)
 Frame = +3

Query: 96  MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXXQEKALREAWNKS 275
           MVIPPP +A RI +YLKPYLL+MHFSNKYVSAQVIH P          QEK LR      
Sbjct: 1   MVIPPPDRAARIVSYLKPYLLRMHFSNKYVSAQVIHTPTATVACSASSQEKLLRS----D 56

Query: 276 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVKAVIDSLREAGVK 443
            +STRDVAAAAKIGKLLGER+LLK IPAVS+  K+EQ+YHGKV+AVIDS+REAGVK
Sbjct: 57  LESTRDVAAAAKIGKLLGERMLLKGIPAVSIHMKREQKYHGKVRAVIDSVREAGVK 112


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