BLASTX nr result

ID: Atractylodes21_contig00015948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015948
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31756.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002283850.1| PREDICTED: ribosomal L1 domain-containing pr...    92   4e-17
emb|CAN65947.1| hypothetical protein VITISV_020727 [Vitis vinifera]    92   4e-17
ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing pr...    91   1e-16
ref|XP_002321931.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>emb|CBI31756.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/84 (61%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   SSMAISISTATQAVDALLKWKNSQSNSQNPQLL--PEDDFIYLILTLKKIPQKGGINGAR 175
           S  A++  T  +A  ALLKW+ S+SN Q PQLL   ED FIYLILTLKKIP KG     R
Sbjct: 19  SPPAVAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPPKG-----R 73

Query: 176 TNPHKIPLPHPLISPTSFAELCLI 247
           TNPHKIPLPHPL +P + +ELCLI
Sbjct: 74  TNPHKIPLPHPLHTPPN-SELCLI 96


>ref|XP_002283850.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Vitis
           vinifera]
          Length = 394

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/84 (61%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   SSMAISISTATQAVDALLKWKNSQSNSQNPQLL--PEDDFIYLILTLKKIPQKGGINGAR 175
           S  A++  T  +A  ALLKW+ S+SN Q PQLL   ED FIYLILTLKKIP KG     R
Sbjct: 3   SPPAVAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPPKG-----R 57

Query: 176 TNPHKIPLPHPLISPTSFAELCLI 247
           TNPHKIPLPHPL +P + +ELCLI
Sbjct: 58  TNPHKIPLPHPLHTPPN-SELCLI 80


>emb|CAN65947.1| hypothetical protein VITISV_020727 [Vitis vinifera]
          Length = 394

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/84 (61%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   SSMAISISTATQAVDALLKWKNSQSNSQNPQLL--PEDDFIYLILTLKKIPQKGGINGAR 175
           S  A++  T  +A  ALLKW+ S+SN Q PQLL   ED FIYLILTLKKIP KG     R
Sbjct: 3   SPPAVAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPPKG-----R 57

Query: 176 TNPHKIPLPHPLISPTSFAELCLI 247
           TNPHKIPLPHPL +P + +ELCLI
Sbjct: 58  TNPHKIPLPHPLHTPPN-SELCLI 80


>ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Glycine
           max]
          Length = 408

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   SSMAISISTATQAVDALLKWKNSQSNSQNPQLLPED-DFIYLILTLKKIPQKGGINGART 178
           +S  +S  T ++AVDALL+W+ SQS  Q P+LL ED +F+YLILTLKKIP K     +R 
Sbjct: 2   ASENVSPETVSKAVDALLQWRRSQSEIQKPKLLGEDEEFVYLILTLKKIPSK-----SRV 56

Query: 179 NPHKIPLPHPLISPTSFAELCLI 247
           NPHKIPLPH LISP  F+E CLI
Sbjct: 57  NPHKIPLPHSLISP--FSEQCLI 77


>ref|XP_002321931.1| predicted protein [Populus trichocarpa] gi|222868927|gb|EEF06058.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +2

Query: 5   SMAISISTATQAVDALLKWKNSQSNSQNPQLLPEDDFIYLILTLKKIPQKGGINGARTNP 184
           S  +S  T  +AV+ALLKW++S  N+Q PQLL +D+F YLILTLKKIPQKG    +R N 
Sbjct: 9   SSGVSPKTVEKAVNALLKWRSSTLNTQKPQLLEQDEFFYLILTLKKIPQKG---VSRINA 65

Query: 185 HKIPLPHPLISPTSFA-ELCLI 247
           HKIPLP+ LI+P   A E+CLI
Sbjct: 66  HKIPLPNSLINPLIEAPEICLI 87


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