BLASTX nr result

ID: Atractylodes21_contig00015942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015942
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana] ...    72   4e-11
gb|AFK44510.1| unknown [Medicago truncatula]                           72   5e-11
tpg|DAA62246.1| TPA: arabinogalactan protein [Zea mays]                71   1e-10
ref|NP_001148905.1| arabinogalactan protein [Zea mays] gi|195623...    71   1e-10
ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arab...    70   1e-10

>ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7573382|emb|CAB87686.1| putative protein [Arabidopsis
           thaliana] gi|17065570|gb|AAL32939.1| putative protein
           [Arabidopsis thaliana] gi|17380652|gb|AAL36156.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148563|gb|AAM10172.1| putative protein [Arabidopsis
           thaliana] gi|21436275|gb|AAM51276.1| unknown protein
           [Arabidopsis thaliana] gi|21593584|gb|AAM65551.1|
           unknown [Arabidopsis thaliana]
           gi|332004326|gb|AED91709.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 207

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +3

Query: 78  MALNPNLYGNGMPVAFVNEMFVLIRDGVEFEVDKIPGAPGG 200
           MALNP L  NGMPV FVNEMFVL+RDGVEFEVDKIPG  GG
Sbjct: 1   MALNPQLLPNGMPVPFVNEMFVLVRDGVEFEVDKIPGGHGG 41


>gb|AFK44510.1| unknown [Medicago truncatula]
          Length = 206

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +3

Query: 78  MALNPNLYGNGMPVAFVNEMFVLIRDGVEFEVDKIPGA 191
           MALNP L+ NGMPVAFVNEMFVL RDGVEFEVDKIPGA
Sbjct: 1   MALNPQLFPNGMPVAFVNEMFVLARDGVEFEVDKIPGA 38


>tpg|DAA62246.1| TPA: arabinogalactan protein [Zea mays]
          Length = 205

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/41 (78%), Positives = 34/41 (82%)
 Frame = +3

Query: 78  MALNPNLYGNGMPVAFVNEMFVLIRDGVEFEVDKIPGAPGG 200
           MA NP L+GNGMPV F  EMFVL+RDGVEF VDKIP APGG
Sbjct: 1   MAENPQLFGNGMPVPFYGEMFVLVRDGVEFHVDKIPSAPGG 41


>ref|NP_001148905.1| arabinogalactan protein [Zea mays] gi|195623122|gb|ACG33391.1|
           arabinogalactan protein [Zea mays]
          Length = 119

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/41 (78%), Positives = 34/41 (82%)
 Frame = +3

Query: 78  MALNPNLYGNGMPVAFVNEMFVLIRDGVEFEVDKIPGAPGG 200
           MA NP L+GNGMPV F  EMFVL+RDGVEF VDKIP APGG
Sbjct: 1   MAENPQLFGNGMPVPFYGEMFVLVRDGVEFHVDKIPSAPGG 41


>ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arabidopsis lyrata subsp.
           lyrata] gi|297317324|gb|EFH47746.1| hypothetical protein
           ARALYDRAFT_909134 [Arabidopsis lyrata subsp. lyrata]
          Length = 207

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +3

Query: 78  MALNPNLYGNGMPVAFVNEMFVLIRDGVEFEVDKIPGAPGG 200
           MALNP L  NG+P+ FVNEMFVL+RDGVEFEVDKIPG  GG
Sbjct: 1   MALNPQLLPNGIPIPFVNEMFVLVRDGVEFEVDKIPGGHGG 41


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