BLASTX nr result
ID: Atractylodes21_contig00015932
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00015932 (595 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera] 117 9e-30 ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi... 118 2e-29 ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi... 117 3e-29 ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containi... 106 6e-23 ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|2... 109 4e-22 >emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera] Length = 841 Score = 117 bits (293), Expect(2) = 9e-30 Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 3/103 (2%) Frame = -1 Query: 301 DVISATSVIRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIH 122 D S IR+ QHG F+EAFA YV++QR GL P+TF ++SALKACAR+ Y GG+ IH Sbjct: 65 DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIH 124 Query: 121 AQVHSYGFCG---DVYVETALVGFYTKLGHMETAKMVFDEMSE 2 QV +GF G +YVETALV FY KLG ME A+ +FDEM+E Sbjct: 125 GQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAE 167 Score = 38.5 bits (88), Expect(2) = 9e-30 Identities = 17/35 (48%), Positives = 27/35 (77%) Frame = -2 Query: 522 MLVPRITTLLNRFLTAKQLKQLHGLILVHGVNHLE 418 ML+ +++T+ L+ KQ KQ+H LIL+HG++HLE Sbjct: 1 MLISKLSTIS---LSVKQAKQVHALILIHGLSHLE 32 >ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Vitis vinifera] Length = 580 Score = 118 bits (295), Expect(2) = 2e-29 Identities = 61/103 (59%), Positives = 74/103 (71%), Gaps = 3/103 (2%) Frame = -1 Query: 301 DVISATSVIRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIH 122 D S IR+ QHG F+EAFA YV++QR GL P+TF ++SALKACAR+ Y GGI IH Sbjct: 69 DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIH 128 Query: 121 AQVHSYGF-CG--DVYVETALVGFYTKLGHMETAKMVFDEMSE 2 QV +GF CG +YVETALV FY KLG ME A+ +FDEM+E Sbjct: 129 GQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAE 171 Score = 36.6 bits (83), Expect(2) = 2e-29 Identities = 17/36 (47%), Positives = 26/36 (72%) Frame = -2 Query: 525 RMLVPRITTLLNRFLTAKQLKQLHGLILVHGVNHLE 418 R L +++T+ L+ KQ KQ+H LIL+HG++HLE Sbjct: 4 RCLFSKLSTIS---LSVKQAKQVHALILIHGLSHLE 36 >ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Vitis vinifera] gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera] Length = 580 Score = 117 bits (293), Expect(2) = 3e-29 Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 3/103 (2%) Frame = -1 Query: 301 DVISATSVIRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIH 122 D S IR+ QHG F+EAFA YV++QR GL P+TF ++SALKACAR+ Y GG+ IH Sbjct: 69 DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIH 128 Query: 121 AQVHSYGFCG---DVYVETALVGFYTKLGHMETAKMVFDEMSE 2 QV +GF G +YVETALV FY KLG ME A+ +FDEM+E Sbjct: 129 GQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAE 171 Score = 36.6 bits (83), Expect(2) = 3e-29 Identities = 17/36 (47%), Positives = 26/36 (72%) Frame = -2 Query: 525 RMLVPRITTLLNRFLTAKQLKQLHGLILVHGVNHLE 418 R L +++T+ L+ KQ KQ+H LIL+HG++HLE Sbjct: 4 RCLFSKLSTIS---LSVKQAKQVHALILIHGLSHLE 36 >ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Cucumis sativus] gi|449529850|ref|XP_004171911.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Cucumis sativus] Length = 580 Score = 106 bits (264), Expect(2) = 6e-23 Identities = 54/100 (54%), Positives = 68/100 (68%) Frame = -1 Query: 301 DVISATSVIRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIH 122 D + +R+F Q+G F EA A YV++QR GL PSTF V+S L+AC R+ G IH Sbjct: 68 DAFTWACAVRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFRGWCIH 127 Query: 121 AQVHSYGFCGDVYVETALVGFYTKLGHMETAKMVFDEMSE 2 AQV+ GFC VYV+TALV FY+KLG M A+ VFDEM+E Sbjct: 128 AQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDEMTE 167 Score = 26.6 bits (57), Expect(2) = 6e-23 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2 Query: 522 MLVPRITTLLNRFLTAKQLKQLHGLILVHGVNHLE 418 ML + LN + KQ Q+H ILV+G+ +LE Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAQILVNGLPNLE 35 >ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa] Length = 596 Score = 109 bits (272), Expect = 4e-22 Identities = 54/92 (58%), Positives = 67/92 (72%) Frame = -1 Query: 277 IRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIHAQVHSYGF 98 IRYF Q G F+EA YV++QR GL PSTF V+SAL+A AR Y GG+ IHA+ + YGF Sbjct: 96 IRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYARTTYKMGGMSIHAESYKYGF 155 Query: 97 CGDVYVETALVGFYTKLGHMETAKMVFDEMSE 2 VYV+TALV Y+KLG M TA+ VFDE++E Sbjct: 156 SNCVYVQTALVDLYSKLGDMNTAQKVFDELAE 187