BLASTX nr result

ID: Atractylodes21_contig00015932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015932
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   117   9e-30
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   118   2e-29
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   117   3e-29
ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containi...   106   6e-23
ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|2...   109   4e-22

>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  117 bits (293), Expect(2) = 9e-30
 Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 DVISATSVIRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIH 122
           D  S    IR+  QHG F+EAFA YV++QR GL P+TF ++SALKACAR+ Y  GG+ IH
Sbjct: 65  DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIH 124

Query: 121 AQVHSYGFCG---DVYVETALVGFYTKLGHMETAKMVFDEMSE 2
            QV  +GF G    +YVETALV FY KLG ME A+ +FDEM+E
Sbjct: 125 GQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAE 167



 Score = 38.5 bits (88), Expect(2) = 9e-30
 Identities = 17/35 (48%), Positives = 27/35 (77%)
 Frame = -2

Query: 522 MLVPRITTLLNRFLTAKQLKQLHGLILVHGVNHLE 418
           ML+ +++T+    L+ KQ KQ+H LIL+HG++HLE
Sbjct: 1   MLISKLSTIS---LSVKQAKQVHALILIHGLSHLE 32


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  118 bits (295), Expect(2) = 2e-29
 Identities = 61/103 (59%), Positives = 74/103 (71%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 DVISATSVIRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIH 122
           D  S    IR+  QHG F+EAFA YV++QR GL P+TF ++SALKACAR+ Y  GGI IH
Sbjct: 69  DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIH 128

Query: 121 AQVHSYGF-CG--DVYVETALVGFYTKLGHMETAKMVFDEMSE 2
            QV  +GF CG   +YVETALV FY KLG ME A+ +FDEM+E
Sbjct: 129 GQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAE 171



 Score = 36.6 bits (83), Expect(2) = 2e-29
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -2

Query: 525 RMLVPRITTLLNRFLTAKQLKQLHGLILVHGVNHLE 418
           R L  +++T+    L+ KQ KQ+H LIL+HG++HLE
Sbjct: 4   RCLFSKLSTIS---LSVKQAKQVHALILIHGLSHLE 36


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  117 bits (293), Expect(2) = 3e-29
 Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
 Frame = -1

Query: 301 DVISATSVIRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIH 122
           D  S    IR+  QHG F+EAFA YV++QR GL P+TF ++SALKACAR+ Y  GG+ IH
Sbjct: 69  DSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIH 128

Query: 121 AQVHSYGFCG---DVYVETALVGFYTKLGHMETAKMVFDEMSE 2
            QV  +GF G    +YVETALV FY KLG ME A+ +FDEM+E
Sbjct: 129 GQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAE 171



 Score = 36.6 bits (83), Expect(2) = 3e-29
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -2

Query: 525 RMLVPRITTLLNRFLTAKQLKQLHGLILVHGVNHLE 418
           R L  +++T+    L+ KQ KQ+H LIL+HG++HLE
Sbjct: 4   RCLFSKLSTIS---LSVKQAKQVHALILIHGLSHLE 36


>ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Cucumis sativus]
           gi|449529850|ref|XP_004171911.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g22760-like [Cucumis sativus]
          Length = 580

 Score =  106 bits (264), Expect(2) = 6e-23
 Identities = 54/100 (54%), Positives = 68/100 (68%)
 Frame = -1

Query: 301 DVISATSVIRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIH 122
           D  +    +R+F Q+G F EA A YV++QR GL PSTF V+S L+AC R+     G  IH
Sbjct: 68  DAFTWACAVRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFRGWCIH 127

Query: 121 AQVHSYGFCGDVYVETALVGFYTKLGHMETAKMVFDEMSE 2
           AQV+  GFC  VYV+TALV FY+KLG M  A+ VFDEM+E
Sbjct: 128 AQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDEMTE 167



 Score = 26.6 bits (57), Expect(2) = 6e-23
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 522 MLVPRITTLLNRFLTAKQLKQLHGLILVHGVNHLE 418
           ML   +   LN  +  KQ  Q+H  ILV+G+ +LE
Sbjct: 1   MLGSDLKFFLNSSVHVKQATQIHAQILVNGLPNLE 35


>ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|222840968|gb|EEE78515.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  109 bits (272), Expect = 4e-22
 Identities = 54/92 (58%), Positives = 67/92 (72%)
 Frame = -1

Query: 277 IRYFCQHGGFREAFAQYVELQRSGLLPSTFTVASALKACARLGYGNGGIMIHAQVHSYGF 98
           IRYF Q G F+EA   YV++QR GL PSTF V+SAL+A AR  Y  GG+ IHA+ + YGF
Sbjct: 96  IRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYARTTYKMGGMSIHAESYKYGF 155

Query: 97  CGDVYVETALVGFYTKLGHMETAKMVFDEMSE 2
              VYV+TALV  Y+KLG M TA+ VFDE++E
Sbjct: 156 SNCVYVQTALVDLYSKLGDMNTAQKVFDELAE 187


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