BLASTX nr result

ID: Atractylodes21_contig00015763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015763
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]    83   3e-22
ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vi...    83   3e-22
ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, pa...    78   1e-20
gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]         71   5e-20
ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vi...    74   2e-18

>emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score = 83.2 bits (204), Expect(2) = 3e-22
 Identities = 56/168 (33%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
 Frame = +2

Query: 374  RLQNLGLSECKRLEVLPELPPSIFYLDASHCTSLEQLQ-GLLNYDHPFAN--FYFKGCPK 544
            RL++L L  CK L  LPELP SI YL+A  CTSLE L      Y     +  F F  C +
Sbjct: 913  RLRSLTLEHCKSLRSLPELPSSIEYLNAHSCTSLETLSCSSSTYTSKLGDLRFNFTNCFR 972

Query: 545  LCRNLTIDSQVSMLQSRSLDSSITSHGSRYQFSSLLWYIYSHINICGIFSAPERVILYSV 724
            L  N   D   ++L+   L SS+                        +    ER +L   
Sbjct: 973  LGENQGSDIVETILEGTQLASSMAK----------------------LLEPDERGLLQHG 1010

Query: 725  VDITFHGNRIPQWFTNQNTGNRLKIEMPRDWDDNKFRGYVTCVVFTPK 868
                  G+RIP+WFT+Q+ G+++ +E+P  W + K+ G   CVVF  K
Sbjct: 1011 YQALVPGSRIPKWFTHQSVGSKVIVELPPHWYNTKWMGLAACVVFNFK 1058



 Score = 48.5 bits (114), Expect(2) = 3e-22
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
 Frame = +3

Query: 6    KLLSSVFSRNNLQKLSIVQDKRIRSRCRTSISQHSCSPSKMRHPQSLVISSLAGLCSLRE 185
            ++ SS+    NL+ LS+   K   S+ R  IS  S   + ++ P       L+GL SL+ 
Sbjct: 815  EVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLP------FLSGLYSLKS 868

Query: 186  LDFSHCNISE--VPDGIGGLSCLEILSLCGNNFTSLPGCLNQL 308
            L+ S CN+ E  +P  +  LS LE L L  N+F +LP  L++L
Sbjct: 869  LNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRL 911


>ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score = 83.2 bits (204), Expect(2) = 3e-22
 Identities = 56/168 (33%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
 Frame = +2

Query: 374  RLQNLGLSECKRLEVLPELPPSIFYLDASHCTSLEQLQ-GLLNYDHPFAN--FYFKGCPK 544
            RL++L L  CK L  LPELP SI YL+A  CTSLE L      Y     +  F F  C +
Sbjct: 828  RLRSLTLEHCKSLRSLPELPSSIEYLNAHSCTSLETLSCSSSTYTSKLGDLRFNFTNCFR 887

Query: 545  LCRNLTIDSQVSMLQSRSLDSSITSHGSRYQFSSLLWYIYSHINICGIFSAPERVILYSV 724
            L  N   D   ++L+   L SS+                        +    ER +L   
Sbjct: 888  LGENQGSDIVETILEGTQLASSMAK----------------------LLEPDERGLLQHG 925

Query: 725  VDITFHGNRIPQWFTNQNTGNRLKIEMPRDWDDNKFRGYVTCVVFTPK 868
                  G+RIP+WFT+Q+ G+++ +E+P  W + K+ G   CVVF  K
Sbjct: 926  YQALVPGSRIPKWFTHQSVGSKVIVELPPHWYNTKWMGLAACVVFNFK 973



 Score = 48.5 bits (114), Expect(2) = 3e-22
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
 Frame = +3

Query: 6    KLLSSVFSRNNLQKLSIVQDKRIRSRCRTSISQHSCSPSKMRHPQSLVISSLAGLCSLRE 185
            ++ SS+    NL+ LS+   K   S+ R  IS  S   + ++ P       L+GL SL+ 
Sbjct: 730  EVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLP------FLSGLYSLKS 783

Query: 186  LDFSHCNISE--VPDGIGGLSCLEILSLCGNNFTSLPGCLNQL 308
            L+ S CN+ E  +P  +  LS LE L L  N+F +LP  L++L
Sbjct: 784  LNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRL 826


>ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score = 78.2 bits (191), Expect(2) = 1e-20
 Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
 Frame = +2

Query: 374 RLQNLGLSECKRLEVLPELPPSIFYLDASHCTSLEQLQ-GLLNYDHPFAN--FYFKGCPK 544
           RL+ L L  CK L  LPELP SI YL+A  C SLE L      Y     +  F F  C +
Sbjct: 552 RLKRLTLEHCKSLRSLPELPSSIEYLNAHSCASLETLSCSSSTYTSKLGDLRFNFTNCFR 611

Query: 545 LCRNLTIDSQVSMLQSRSLDSSITSHGSRYQFSSLLWYIYSHINICGIFSAPERVILYSV 724
           L  N   D   ++L+   L SS+                        +    ER +L   
Sbjct: 612 LGENQGSDIVETILEGTQLASSMAK----------------------LLEPDERSLLQHG 649

Query: 725 VDITFHGNRIPQWFTNQNTGNRLKIEMPRDWDDNKFRGYVTCVVFTPK 868
                 G+RIP+WFT+++ G+++  E+P  W + K  G   CVVF  K
Sbjct: 650 YQALVQGSRIPKWFTHRSEGSKVIAELPPHWYNTKLMGLAACVVFNFK 697



 Score = 48.1 bits (113), Expect(2) = 1e-20
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
 Frame = +3

Query: 6   KLLSSVFSRNNLQKLSIVQDKRIRSRCRTSISQHSCSPSKMRHPQSLVISSLAGLCSLRE 185
           ++ SS+    NL+ LS+   K   S+ R  IS  S   + ++ P       L+GL SL+ 
Sbjct: 454 EVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLP------FLSGLYSLKS 507

Query: 186 LDFSHCNISE--VPDGIGGLSCLEILSLCGNNFTSLPGCLNQL 308
           L+ S CN+ E  +P  +  LS LE L L  N+F +LP  L++L
Sbjct: 508 LNLSDCNLLEGALPTDLSSLSSLENLYLDKNSFITLPASLSRL 550


>gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score = 70.9 bits (172), Expect(2) = 5e-20
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
 Frame = +2

Query: 374  RLQNLGLSECKRLEVLPELPPSIFYLDASHCTSLEQLQGLLNYDHPFANFYFKGCPKLCR 553
            RL+ L L  C RLE LPELPPSI  + A+ CTSL  +  L  Y    ++  F+ C +L +
Sbjct: 902  RLKRLKLHGCGRLESLPELPPSIKGIFANECTSLMSIDQLTKYP-MLSDATFRNCRQLVK 960

Query: 554  NLTIDSQVSMLQSRSLDSSITSHGSRYQFSSLLWYIYSHINICGIFSAPERVILYSVVDI 733
            N    S V  L  + L++                 +Y ++  C                +
Sbjct: 961  NKQHTSMVDSLLKQMLEA-----------------LYMNVRFC----------------L 987

Query: 734  TFHGNRIPQWFTNQNTGNR-LKIEMPRDWDDNKFRGYVTCVVFTPK 868
               G  IP+WFT ++ G + + + +P +W    FRG+  CV+   K
Sbjct: 988  YVPGMEIPEWFTYKSWGTQSMSVALPTNWFTPTFRGFTVCVILDKK 1033



 Score = 53.5 bits (127), Expect(2) = 5e-20
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
 Frame = +3

Query: 15   SSVFSRNNLQKLSIVQDKRIRSRCRTSISQHSCSPSKMRHPQSLVISSLAGLCSLRELDF 194
            SS+    NL+ LS+       S C    SQ S S S  +    +   +L+GLCSL  LD 
Sbjct: 808  SSMSLLKNLKHLSL-------SGCNALSSQVSSS-SHGQKSMGVNFQNLSGLCSLIMLDL 859

Query: 195  SHCNISE--VPDGIGGLSCLEILSLCGNNFTSLP 290
            S CNIS+  + + +G LS LEIL L GNNF+++P
Sbjct: 860  SDCNISDGGILNNLGFLSSLEILILNGNNFSNIP 893


>ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score = 73.9 bits (180), Expect(2) = 2e-18
 Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
 Frame = +2

Query: 374  RLQNLGLSECKRLEVLPELPPSIFYLDASHCTSLEQLQ----GLLNYDHPFANFYFKGCP 541
            +L+ L L  CK L+ LPELP SI  L A+ CTSLE +     G +       NF F  C 
Sbjct: 1070 QLERLILEHCKSLQSLPELPSSIIELLANDCTSLENISYLSSGFVLRKFCDFNFEFCNCF 1129

Query: 542  KLCRNLTIDSQVSMLQSRSLDSSITSHGSRYQFSSLLWYIYSHINICGIFSAPERVILYS 721
            +L  N   D+  ++L +    +S+T       +SSL  +               R+   +
Sbjct: 1130 RLMENEQSDTLEAILLAIRRFASVTKFMDPMDYSSLRTFA-------------SRIPYDA 1176

Query: 722  VVDITFHGNRIPQWFTNQNTGNRLKIEMPRDWDDNKFRGYVTCVVFTP 865
            VV     G+ IP+WFT+Q+ G  + +E+P  W   +  G   C VF P
Sbjct: 1177 VVP----GSSIPEWFTDQSVGCSVTVELPPHWYTTRLIGLAVCAVFHP 1220



 Score = 45.1 bits (105), Expect(2) = 2e-18
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
 Frame = +3

Query: 15   SSVFSRNNLQKLSIVQDKRIRSRCRTSISQHSCSPSKMRHPQSLVISSLAGLCSLRELDF 194
            +S+    NLQ LS+   K   S+ R        SP+     +   +SSL  L SL+EL+ 
Sbjct: 975  TSITLLTNLQVLSLTGCKGGESKSRNLALSLRSSPT-----EGFRLSSLTALYSLKELNL 1029

Query: 195  SHCNISE--VPDGIGGLSCLEILSLCGNNFTSLP 290
            S CN+ E  +P  +  LS LE L L  N+F ++P
Sbjct: 1030 SDCNLLEGALPSDLSSLSWLERLDLSINSFITVP 1063


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