BLASTX nr result

ID: Atractylodes21_contig00015753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015753
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83231.1| hypothetical protein VITISV_018480 [Vitis vinifera]    86   3e-15
gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi]         81   1e-13
ref|XP_002881966.1| protein binding protein [Arabidopsis lyrata ...    80   1e-13
ref|NP_001078058.1| RING/U-box domain-containing protein [Arabid...    79   5e-13
gb|AAC27460.1| putative RING zinc finger protein [Arabidopsis th...    79   5e-13

>emb|CAN83231.1| hypothetical protein VITISV_018480 [Vitis vinifera]
          Length = 357

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/93 (45%), Positives = 55/93 (59%)
 Frame = +2

Query: 113 FHNIRCSRRFHVIVLKKGGIETKAVFCAVCLYDVAGGERYRKLPQCHHCFHVDCIDPWFE 292
           ++  +  +R HV   K      + ++C VCL D   GER R+LP C HCFHV CID WF+
Sbjct: 38  YYRRKVLKRDHVFCYKPNRTHXZ-IYCVVCLCDAVEGERLRRLPDCKHCFHVGCIDAWFQ 96

Query: 293 LKSSCPLCRSQVPVSLLPARQIPQEPPSFLALI 391
             S+CPLCRSQV    LP R+ P     FL+L+
Sbjct: 97  AHSTCPLCRSQVS---LPHRRQPTLFSHFLSLL 126


>gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi]
          Length = 308

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = +2

Query: 158 KKGGIETKAVFCAVCLYDVAGGERYRKLPQCHHCFHVDCIDPWFELKSSCPLCRSQVPVS 337
           K G ++  A+ CAVCL +VA GE+ R LP+C H FHV+CID WF    +CPLCR+ V   
Sbjct: 91  KDGAVDVDALECAVCLSEVADGEKVRTLPKCGHGFHVECIDMWFHSHDTCPLCRAPVGAG 150

Query: 338 LLPARQIPQEPPSFLAL 388
                 +P+E PS  +L
Sbjct: 151 AGDLDALPREDPSAASL 167


>ref|XP_002881966.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327805|gb|EFH58225.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = +2

Query: 188 FCAVCLYDVAGGERYRKLPQCHHCFHVDCIDPWFELKSSCPLCRSQVP 331
           +C +CL D A GE+ R++  C+HCFH DCIDPW E KS+CPLCR+++P
Sbjct: 69  YCTICLEDAAEGEKMRRITTCNHCFHADCIDPWLEKKSTCPLCRAEIP 116


>ref|NP_001078058.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|330255347|gb|AEC10441.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 145

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +2

Query: 188 FCAVCLYDVAGGERYRKLPQCHHCFHVDCIDPWFELKSSCPLCRSQVP 331
           +C +CL D A GE+ R++  C HCFHVDCIDPW   KS+CPLCR+++P
Sbjct: 69  YCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIP 116


>gb|AAC27460.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 624

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +2

Query: 188 FCAVCLYDVAGGERYRKLPQCHHCFHVDCIDPWFELKSSCPLCRSQVP 331
           +C +CL D A GE+ R++  C HCFHVDCIDPW   KS+CPLCR+++P
Sbjct: 397 YCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIP 444



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +2

Query: 188 FCAVCLYDVAGGERYRKLPQCHHCFHVDCIDPWFELKSSCPLCRSQVP 331
           +C +CL +   GE+ R++  C HCFHVDCIDPW E KS CPLCR+++P
Sbjct: 548 YCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIP 595


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