BLASTX nr result

ID: Atractylodes21_contig00015736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015736
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   174   7e-42
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   171   4e-41
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   169   2e-40
sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding pro...   168   5e-40
gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyac...   168   5e-40

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/92 (89%), Positives = 88/92 (95%)
 Frame = +1

Query: 46  MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 225
           MAASTM+LSSPSLAGQA+K+APS+S LLG+GRVTMRKTA +PK VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 60

Query: 226 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 321
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 92


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/92 (85%), Positives = 87/92 (94%)
 Frame = +1

Query: 46  MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 225
           MA+STM+LSSPSLAG+A+K+ P+ S +LG+GRVTMRKTA KPK VSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 226 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 321
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 92


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/92 (85%), Positives = 86/92 (93%)
 Frame = +1

Query: 46  MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 225
           MAAS+M+LSSPS AGQAVK++P+ S LLG+GR+TMRKTA KPK VSSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 226 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 321
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 92


>sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
           AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
           Precursor gi|19829|emb|CAA36958.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 267

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/92 (84%), Positives = 88/92 (95%)
 Frame = +1

Query: 46  MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 225
           MAASTM+LSSPS AG+AVK++PS+S + G+G+VTMRKTA+K KTVSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 226 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 321
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPET 92


>gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyacinthus orientalis]
          Length = 239

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/90 (87%), Positives = 84/90 (93%)
 Frame = +1

Query: 52  ASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYLGP 231
           ASTM+LSSPSLAG AVK+ PS+S + GDGR TMRKTA KPKTVSSGSPWYGP+RVKYLGP
Sbjct: 14  ASTMALSSPSLAGTAVKLTPSSSVVSGDGRFTMRKTAGKPKTVSSGSPWYGPERVKYLGP 73

Query: 232 FSGEAPSYLTGEFPGDYGWDTAGLSADPET 321
           FSGEAPSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 74  FSGEAPSYLTGEFPGDYGWDTAGLSADPET 103


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