BLASTX nr result

ID: Atractylodes21_contig00015727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015727
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subun...   324   3e-86
ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subun...   323   4e-86
gb|ACL54982.1| nuclear cap-binding protein CBP20 [Solanum tubero...   313   7e-83
gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tubero...   313   7e-83
ref|XP_002517864.1| 20 kD nuclear cap binding protein, putative ...   311   2e-82

>ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
            [Vitis vinifera] gi|359485224|ref|XP_003633238.1|
            PREDICTED: nuclear cap-binding protein subunit 2-like
            isoform 2 [Vitis vinifera]
            gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear
            cap-binding protein subunit 2-like isoform 3 [Vitis
            vinifera]
          Length = 253

 Score =  324 bits (830), Expect = 3e-86
 Identities = 163/242 (67%), Positives = 181/242 (74%)
 Frame = -3

Query: 1014 MALLFKDPNKISAYRDRRFPGTQEEYEHALQTSTTVYIGNMSFYTTEEQLYELFSRAGEI 835
            MALLFKDP+K+SAYRD+RFPGTQE++EHAL TS TVYIGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1    MALLFKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEI 60

Query: 834  KKIVMGLDKNTKTPCGFCFVMYYSREDTEDSVKYISGTILDDRPIRVDFDWGFXXXXXXX 655
            KKI+MGLDKN+KTPCGFCFV+YYSR+D ED+VKYISGT+LDDRPIRVDFDWGF       
Sbjct: 61   KKIIMGLDKNSKTPCGFCFVLYYSRDDAEDAVKYISGTVLDDRPIRVDFDWGFQEGRQWG 120

Query: 654  XXXXXXQVRDEYRTDYDPDRGGYGKLVQKELEEQRQVVDYGVGSLGSFQPPPIAPNXXXX 475
                  QVRDEYRTDYDP RGGYGKLVQ+ELE QRQ+VDYG GSLGSF  PP+ P+    
Sbjct: 121  RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGSGSLGSF--PPVMPSQYGR 178

Query: 474  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDISKRNSEHESRRNSDHDSRQEKNPRFRE 295
                                           D SKR S+H+SRRNSDHDSR EKNPRFRE
Sbjct: 179  HGGSQGHGGSNRHSRDYPRKRHRDDDRHSH-DFSKRTSDHDSRRNSDHDSRPEKNPRFRE 237

Query: 294  HG 289
             G
Sbjct: 238  SG 239


>ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
          Length = 258

 Score =  323 bits (829), Expect = 4e-86
 Identities = 167/245 (68%), Positives = 180/245 (73%), Gaps = 3/245 (1%)
 Frame = -3

Query: 1014 MALLFKDPNKISAYRDRRFPGTQEEYEHALQTSTTVYIGNMSFYTTEEQLYELFSRAGEI 835
            MALLFKDP+KISAYRDRRFPGTQEE+EHAL TSTTVY+GNMSFYTTEEQ+YELFSR GEI
Sbjct: 1    MALLFKDPSKISAYRDRRFPGTQEEFEHALVTSTTVYVGNMSFYTTEEQVYELFSRTGEI 60

Query: 834  KKIVMGLDKNTKTPCGFCFVMYYSREDTEDSVKYISGTILDDRPIRVDFDWGFXXXXXXX 655
            KKI+MGLDKNTKTPCGFCFV+YYSREDTED+ KYISGTILDDRPIRVDFDWGF       
Sbjct: 61   KKIIMGLDKNTKTPCGFCFVLYYSREDTEDACKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 654  XXXXXXQVRDEYRTDYDPD---RGGYGKLVQKELEEQRQVVDYGVGSLGSFQPPPIAPNX 484
                  QVRDEYRTDYDPD    GGYGKLVQKELE QRQ+VDYG GSLGSF PP I  + 
Sbjct: 121  RGRSGGQVRDEYRTDYDPDILLLGGYGKLVQKELEVQRQLVDYGAGSLGSF-PPVIPTSY 179

Query: 483  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDISKRNSEHESRRNSDHDSRQEKNPR 304
                                              + SKR S+HESRRN+DH+SR EKNPR
Sbjct: 180  GRHGGGGGHGHGGSHRHGRDYYRKRHRDDERHTHESSKRTSDHESRRNTDHESRPEKNPR 239

Query: 303  FREHG 289
            FRE G
Sbjct: 240  FRESG 244


>gb|ACL54982.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
            gi|219944403|gb|ACL54983.1| nuclear cap-binding protein
            CBP20 [Solanum tuberosum] gi|224460057|gb|ACN43579.1|
            nuclear cap-binding protein [Solanum tuberosum]
          Length = 255

 Score =  313 bits (801), Expect = 7e-83
 Identities = 161/242 (66%), Positives = 173/242 (71%)
 Frame = -3

Query: 1014 MALLFKDPNKISAYRDRRFPGTQEEYEHALQTSTTVYIGNMSFYTTEEQLYELFSRAGEI 835
            MA LFKD  KISAYRDRRFPGTQEE+E AL  S TVY+GNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1    MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 834  KKIVMGLDKNTKTPCGFCFVMYYSREDTEDSVKYISGTILDDRPIRVDFDWGFXXXXXXX 655
            KKIVMGLDKN+KTPCGFCF+MYYSR+D EDSVKYISGTILDDRPIRVDFDWGF       
Sbjct: 61   KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 654  XXXXXXQVRDEYRTDYDPDRGGYGKLVQKELEEQRQVVDYGVGSLGSFQPPPIAPNXXXX 475
                  QVRDEYRTDYDP RGGYGKLVQKELE QRQ+VDYG GSLG++ PP + P     
Sbjct: 121  RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAY-PPVMPPPHYGR 179

Query: 474  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDISKRNSEHESRRNSDHDSRQEKNPRFRE 295
                                          PD  KR  + ESRRNSDH+SR EKNPRFRE
Sbjct: 180  HNGGNHGRGGSYRHGRDYHRKRHREDDHPRPDYPKRTYDRESRRNSDHESRPEKNPRFRE 239

Query: 294  HG 289
             G
Sbjct: 240  SG 241


>gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
            gi|219944399|gb|ACL54981.1| nuclear cap-binding protein
            CBP20 [Solanum tuberosum] gi|224460063|gb|ACN43582.1|
            nuclear cap-binding protein [Solanum tuberosum]
            gi|262065509|gb|ACY07775.1| CBP20 protein [Solanum
            tuberosum]
          Length = 255

 Score =  313 bits (801), Expect = 7e-83
 Identities = 161/242 (66%), Positives = 173/242 (71%)
 Frame = -3

Query: 1014 MALLFKDPNKISAYRDRRFPGTQEEYEHALQTSTTVYIGNMSFYTTEEQLYELFSRAGEI 835
            MA LFKD  KISAYRDRRFPGTQEE+E AL  S TVY+GNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1    MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 834  KKIVMGLDKNTKTPCGFCFVMYYSREDTEDSVKYISGTILDDRPIRVDFDWGFXXXXXXX 655
            KKIVMGLDKN+KTPCGFCF+MYYSR+D EDSVKYISGTILDDRPIRVDFDWGF       
Sbjct: 61   KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 654  XXXXXXQVRDEYRTDYDPDRGGYGKLVQKELEEQRQVVDYGVGSLGSFQPPPIAPNXXXX 475
                  QVRDEYRTDYDP RGGYGKLVQKELE QRQ+VDYG GSLG++ PP + P     
Sbjct: 121  RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAY-PPVMPPPHYGR 179

Query: 474  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDISKRNSEHESRRNSDHDSRQEKNPRFRE 295
                                          PD  KR  + ESRRNSDH+SR EKNPRFRE
Sbjct: 180  HNGGNHGRGGSYRHGRDYQRKRHREDDHHRPDYPKRTYDRESRRNSDHESRPEKNPRFRE 239

Query: 294  HG 289
             G
Sbjct: 240  SG 241


>ref|XP_002517864.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
            gi|223542846|gb|EEF44382.1| 20 kD nuclear cap binding
            protein, putative [Ricinus communis]
          Length = 255

 Score =  311 bits (798), Expect = 2e-82
 Identities = 165/245 (67%), Positives = 179/245 (73%), Gaps = 3/245 (1%)
 Frame = -3

Query: 1014 MALLFKDPNKISAYRDRRFPGTQEEYEHALQTSTTVYIGNMSFYTTEEQLYELFSRAGEI 835
            MALLFKDP K+SAYRDR+FPG QEE+EHAL TSTTVYIGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1    MALLFKDPAKLSAYRDRKFPGNQEEFEHALLTSTTVYIGNMSFYTTEEQVYELFSRAGEI 60

Query: 834  KKIVMGLDKNTKTPCGFCFVMYYSREDTEDSVKYISGTILDDRPIRVDFDWGFXXXXXXX 655
            KKI+MGLDKNTKTPCGFCFV++YSREDTED+VKYISGTILDDRPIRVDFDWGF       
Sbjct: 61   KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 654  XXXXXXQVRDEYRTDYDPD---RGGYGKLVQKELEEQRQVVDYGVGSLGSFQPPPIAPNX 484
                  QVRDEYRTDYDPD    GGYGKLVQ+EL EQRQ+VDYG GSLGSF PP + P  
Sbjct: 121  RGRSGGQVRDEYRTDYDPDILFLGGYGKLVQREL-EQRQLVDYGAGSLGSF-PPVMPPPQ 178

Query: 483  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDISKRNSEHESRRNSDHDSRQEKNPR 304
                                             P  S+R S+HESRRN+D DSR EKNPR
Sbjct: 179  YGRHGGSGHGGFQRHGRDYHRKRFRDDDRQAREP--SRRTSDHESRRNNDPDSRPEKNPR 236

Query: 303  FREHG 289
            FRE G
Sbjct: 237  FRESG 241


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