BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015714
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   157   7e-37
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   117   7e-25
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   113   2e-23
emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]   111   5e-23
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...   110   9e-23

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  157 bits (398), Expect = 7e-37
 Identities = 71/78 (91%), Positives = 76/78 (97%)
 Frame = -3

Query: 236 PQQNGVAERKNRVLKEMVNSMLSYSGLSDGFWGEAMLTACYVLNRVPNKRNKITPYELWF 57
           PQQNGV ERKNRVLKEMVNSMLSYSGLSDGFWGEAMLTACY+LNRVPNKRNKITPYELW+
Sbjct: 549 PQQNGVFERKNRVLKEMVNSMLSYSGLSDGFWGEAMLTACYLLNRVPNKRNKITPYELWY 608

Query: 56  KKRPNLSYFRVWGCRAVV 3
           KK+PNL+Y RVWGCRA+V
Sbjct: 609 KKKPNLNYLRVWGCRAIV 626


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  117 bits (294), Expect = 7e-25
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = -3

Query: 236 PQQNGVAERKNRVLKEMVNSMLSYSGLSDGFWGEAMLTACYVLNRVPNKRNKITPYELWF 57
           PQQNG+AERKNR LKEM+N+ML  SGLSD  WGEA+L+AC++LNR+P+KR   TPYELW 
Sbjct: 622 PQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRLDKTPYELWK 681

Query: 56  KKRPNLSYFRVWGCRAVV 3
              PNLSY +VWGC A V
Sbjct: 682 GHAPNLSYLKVWGCLAKV 699


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/78 (65%), Positives = 62/78 (79%)
 Frame = -3

Query: 236 PQQNGVAERKNRVLKEMVNSMLSYSGLSDGFWGEAMLTACYVLNRVPNKRNKITPYELWF 57
           PQ NG+AERKNR L ++VN+MLS +GLS  +WGEA+LTAC+VLNRVP K  +ITP+E W 
Sbjct: 602 PQSNGIAERKNRTLTDLVNAMLSTAGLSKAWWGEAILTACHVLNRVPTKNKEITPFEEWE 661

Query: 56  KKRPNLSYFRVWGCRAVV 3
           K+R NLSY R WGC A V
Sbjct: 662 KRRLNLSYLRTWGCLAKV 679


>emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]
          Length = 1136

 Score =  111 bits (278), Expect = 5e-23
 Identities = 46/76 (60%), Positives = 62/76 (81%)
 Frame = -3

Query: 236 PQQNGVAERKNRVLKEMVNSMLSYSGLSDGFWGEAMLTACYVLNRVPNKRNKITPYELWF 57
           PQ NG+AERKNR   EMVN+ML ++ L+   WGEA+LTAC++LNR+P K+N+I+PYELW 
Sbjct: 440 PQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALLTACHILNRIPMKKNEISPYELWK 499

Query: 56  KKRPNLSYFRVWGCRA 9
            ++PN+ YF+VWGC A
Sbjct: 500 GRKPNIGYFKVWGCLA 515


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1453

 Score =  110 bits (276), Expect = 9e-23
 Identities = 49/78 (62%), Positives = 62/78 (79%)
 Frame = -3

Query: 236 PQQNGVAERKNRVLKEMVNSMLSYSGLSDGFWGEAMLTACYVLNRVPNKRNKITPYELWF 57
           PQ NGVAERKNR+L EMVN+ML  +GLS  +WGEA+LTAC+VLN++P K  ++TP+E W 
Sbjct: 738 PQSNGVAERKNRILTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHKEVTPFEEWE 797

Query: 56  KKRPNLSYFRVWGCRAVV 3
           +K+ NLSY R WGC A V
Sbjct: 798 RKKLNLSYLRTWGCLAKV 815