BLASTX nr result

ID: Atractylodes21_contig00015589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015589
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324647.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-30
ref|XP_004139301.1| PREDICTED: thylakoid lumenal 16.5 kDa protei...    94   3e-30
gb|AAM66113.1| thylakoid lumenal 16.5 kDa protein, chloroplast p...    95   1e-29
ref|NP_192162.1| chloroplast thylakoid lumen protein [Arabidopsi...    94   1e-29
ref|XP_002872832.1| chloroplast thylakoid lumen protein [Arabido...    94   1e-29

>ref|XP_002324647.1| predicted protein [Populus trichocarpa] gi|222866081|gb|EEF03212.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 92.4 bits (228), Expect(2) = 2e-30
 Identities = 46/66 (69%), Positives = 53/66 (80%)
 Frame = +3

Query: 6   YLQDVIYKLSKVGQAIANNDLPSAGLVLGQTPDADWLKMANAALSKLSSSPEEMSEVDIF 185
           YLQD++YKLSKVGQAI NNDL +A  VLG + D DW+K AN A +KLSSSPEE  EVD F
Sbjct: 130 YLQDLVYKLSKVGQAIDNNDLSTASSVLGGSTDTDWVKKANIAFTKLSSSPEEKIEVDTF 189

Query: 186 NSSLTS 203
           NSSL+S
Sbjct: 190 NSSLSS 195



 Score = 65.9 bits (159), Expect(2) = 2e-30
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = +1

Query: 295 TSVTKNDIEASKSAFVGTATAFEKWTTLTGLVGQLKGL 408
           +SVT NDIE+SK+AFV +ATAFEKWTTLTGL GQLKGL
Sbjct: 198 SSVTSNDIESSKTAFVSSATAFEKWTTLTGLFGQLKGL 235


>ref|XP_004139301.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449493633|ref|XP_004159385.1|
           PREDICTED: thylakoid lumenal 16.5 kDa protein,
           chloroplastic-like [Cucumis sativus]
          Length = 238

 Score = 93.6 bits (231), Expect(2) = 3e-30
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +3

Query: 6   YLQDVIYKLSKVGQAIANNDLPSAGLVLGQTPDADWLKMANAALSKLSSSPEEMSEVDIF 185
           YLQ+++YKLSKVGQAI NND  +A  VLG + DADW+K AN+A +KLSSSPEE SEVD F
Sbjct: 133 YLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVKKANSAFNKLSSSPEEKSEVDAF 192

Query: 186 NSSLTS 203
           NSSL S
Sbjct: 193 NSSLAS 198



 Score = 63.9 bits (154), Expect(2) = 3e-30
 Identities = 29/38 (76%), Positives = 35/38 (92%)
 Frame = +1

Query: 295 TSVTKNDIEASKSAFVGTATAFEKWTTLTGLVGQLKGL 408
           +SVTKND+E+SK+AFV +A+AFEKWT L GLVGQLKGL
Sbjct: 201 SSVTKNDVESSKTAFVASASAFEKWTALAGLVGQLKGL 238


>gb|AAM66113.1| thylakoid lumenal 16.5 kDa protein, chloroplast precursor
           [Arabidopsis thaliana]
          Length = 216

 Score = 94.7 bits (234), Expect(2) = 1e-29
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +3

Query: 6   YLQDVIYKLSKVGQAIANNDLPSAGLVLGQTPDADWLKMANAALSKLSSSPEEMSEVDIF 185
           YLQD++YKLSKVGQAI NNDLP+AGLVLG+  D +W+K  N A +KLS+SPEE +EV+ F
Sbjct: 111 YLQDLVYKLSKVGQAIENNDLPAAGLVLGKGNDTEWVKTVNLAFTKLSTSPEENTEVEAF 170

Query: 186 NSSLTS 203
           NSSL S
Sbjct: 171 NSSLAS 176



 Score = 61.2 bits (147), Expect(2) = 1e-29
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +1

Query: 295 TSVTKNDIEASKSAFVGTATAFEKWTTLTGLVGQLKGL 408
           TSV KNDIE+SK AFV +A AFEKWTTLTGL+ QLKGL
Sbjct: 179 TSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216


>ref|NP_192162.1| chloroplast thylakoid lumen protein [Arabidopsis thaliana]
           gi|84028274|sp|O22773.3|TL16_ARATH RecName:
           Full=Thylakoid lumenal 16.5 kDa protein, chloroplastic;
           Flags: Precursor gi|14532522|gb|AAK63989.1|
           AT4g02530/T10P11_17 [Arabidopsis thaliana]
           gi|19548053|gb|AAL87390.1| AT4g02530/T10P11_17
           [Arabidopsis thaliana] gi|110740665|dbj|BAE98435.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332656784|gb|AEE82184.1| chloroplast thylakoid lumen
           protein [Arabidopsis thaliana]
          Length = 216

 Score = 94.4 bits (233), Expect(2) = 1e-29
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +3

Query: 6   YLQDVIYKLSKVGQAIANNDLPSAGLVLGQTPDADWLKMANAALSKLSSSPEEMSEVDIF 185
           YLQD++YKLSKVGQAI NNDLP+AGLVLG+  D +W+K  N A +KLS+SPEE +EV+ F
Sbjct: 111 YLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTKLSTSPEENTEVEAF 170

Query: 186 NSSLTS 203
           NSSL S
Sbjct: 171 NSSLAS 176



 Score = 61.2 bits (147), Expect(2) = 1e-29
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +1

Query: 295 TSVTKNDIEASKSAFVGTATAFEKWTTLTGLVGQLKGL 408
           TSV KNDIE+SK AFV +A AFEKWTTLTGL+ QLKGL
Sbjct: 179 TSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216


>ref|XP_002872832.1| chloroplast thylakoid lumen protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318669|gb|EFH49091.1| chloroplast
           thylakoid lumen protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 215

 Score = 94.4 bits (233), Expect(2) = 1e-29
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +3

Query: 6   YLQDVIYKLSKVGQAIANNDLPSAGLVLGQTPDADWLKMANAALSKLSSSPEEMSEVDIF 185
           YLQD++YKLSKVGQAI NNDLP+AGLVLG+  D +W+K  N A +KLS+SPEE +EV+ F
Sbjct: 110 YLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTKLSTSPEENTEVEAF 169

Query: 186 NSSLTS 203
           NSSL S
Sbjct: 170 NSSLAS 175



 Score = 61.2 bits (147), Expect(2) = 1e-29
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = +1

Query: 295 TSVTKNDIEASKSAFVGTATAFEKWTTLTGLVGQLKGL 408
           TSV KNDIE+SK AFV +A AFEKWTTLTGL+ QLKGL
Sbjct: 178 TSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 215


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