BLASTX nr result

ID: Atractylodes21_contig00015487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015487
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]                       202   6e-50
dbj|BAH15073.1| cyclin D3 [Ipomoea batatas]                           184   2e-44
dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]                    183   4e-44
ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]           183   4e-44
ref|XP_002310704.1| predicted protein [Populus trichocarpa] gi|1...   183   5e-44

>dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]
          Length = 372

 Score =  202 bits (515), Expect = 6e-50
 Identities = 109/198 (55%), Positives = 132/198 (66%)
 Frame = +1

Query: 259 QNPIFAIDDALLCDEQEKDLDFGYGFGLSDQENQILKEKDPPFTHXXXXXXXXXXXXXXX 438
           QNP+F  D  L C+E+  + D G  +GL    +   +    P                  
Sbjct: 15  QNPMFVFD-GLYCEEEHFEDDLGE-YGLEQGSDNCDENVKGPLVFLEHDWDWDDDELVSL 72

Query: 439 XXXXXNTLVGEGDLICDESLMVLRKESVDWMIRVGTHYGFVALTTILAVNYFDRFLMSPS 618
                 T +G   L  DESLMV R+ESVDW++RV  HYGF  LTT+LAVNYFDRF+ S S
Sbjct: 73  ISKEKETHLGLSVLNSDESLMVARRESVDWILRVIAHYGFTVLTTVLAVNYFDRFISSLS 132

Query: 619 FQRDKPWMNQLVAVACLSLASKVEEIQTPLLLDLQMEGSKFVFESNTIMKMELLVLSSLQ 798
           FQR+KPWM+QLVAVACLSLA+KVEE Q PLLLD Q+E SKFVFE+ TI +MELLVLS+LQ
Sbjct: 133 FQREKPWMSQLVAVACLSLAAKVEETQVPLLLDFQVEESKFVFEAKTIQRMELLVLSTLQ 192

Query: 799 WKMNPVTPLAFFDYIMRR 852
           WKMNPVTPL+F D+I+RR
Sbjct: 193 WKMNPVTPLSFVDHIVRR 210


>dbj|BAH15073.1| cyclin D3 [Ipomoea batatas]
          Length = 344

 Score =  184 bits (468), Expect = 2e-44
 Identities = 109/225 (48%), Positives = 140/225 (62%), Gaps = 4/225 (1%)
 Frame = +1

Query: 199 PLTSSSHKKKMVSKQQNVCPQNPIFAIDDALLCDEQEKDLDFG-YGFGLSDQENQILKEK 375
           PLT S        K Q    +NPIF+  DAL C+E+  + D G +    +D   +I   K
Sbjct: 3   PLTHSQ-------KDQAFESRNPIFS-PDALFCEEERFEEDVGGWSRFQTDDYAEISVLK 54

Query: 376 DPPFTHXXXXXXXXXXXXXXXXXXXXNTLVGEGDLIC---DESLMVLRKESVDWMIRVGT 546
            P  T                       L  E D+ C   D+SLM+ R E+VDWM++V  
Sbjct: 55  KPLLTFLESDLFWEDDELLAL-------LSKEKDIGCVDLDQSLMLARNEAVDWMLKVIR 107

Query: 547 HYGFVALTTILAVNYFDRFLMSPSFQRDKPWMNQLVAVACLSLASKVEEIQTPLLLDLQM 726
           HYGF ALT +LAVNYFDRF+    FQRDKPWM+QL AVAC+S+A+KVEEIQ PLLLDLQ+
Sbjct: 108 HYGFNALTAVLAVNYFDRFISGVCFQRDKPWMSQLAAVACVSIAAKVEEIQVPLLLDLQV 167

Query: 727 EGSKFVFESNTIMKMELLVLSSLQWKMNPVTPLAFFDYIMRRLNL 861
             +KF+FE+ TI +MELLVLS+LQW+MN VTP++F D+I+RR  L
Sbjct: 168 AETKFLFEAKTIQRMELLVLSTLQWRMNLVTPISFIDHIIRRFKL 212


>dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]
          Length = 372

 Score =  183 bits (465), Expect = 4e-44
 Identities = 101/202 (50%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
 Frame = +1

Query: 259 QNPIFAIDDALLCDEQEKDLDFG-YGFGLSDQE-NQILKEKDPPFTHXXXXXXXXXXXXX 432
           QNPIF   DAL CDE+  D   G  G G  + E N   +  + PF               
Sbjct: 13  QNPIF---DALYCDEERFDECVGGAGSGFKEPEINDFNEIHNNPFAFLFEHDLFWESEEL 69

Query: 433 XXXXXXXNTL--VGEGDLICDESLMVLRKESVDWMIRVGTHYGFVALTTILAVNYFDRFL 606
                   T   +   ++  D SL  +R E+++WM++V  HYGF ALT +LAVNY+DRF+
Sbjct: 70  DALLTKEKTQTHLTFDEINSDASLKAMRNEAINWMLKVIAHYGFNALTAVLAVNYYDRFI 129

Query: 607 MSPSFQRDKPWMNQLVAVACLSLASKVEEIQTPLLLDLQMEGSKFVFESNTIMKMELLVL 786
            S  FQ+DKPWM+QL AVACLS+A+KVEE Q PLLLDLQ+E SK++FE+ TI +MELLVL
Sbjct: 130 TSVCFQKDKPWMSQLAAVACLSVAAKVEETQVPLLLDLQVEESKYLFEAKTIQRMELLVL 189

Query: 787 SSLQWKMNPVTPLAFFDYIMRR 852
           S+LQW+MNPVTP++FFD+I RR
Sbjct: 190 STLQWRMNPVTPISFFDHIARR 211


>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
          Length = 372

 Score =  183 bits (465), Expect = 4e-44
 Identities = 87/128 (67%), Positives = 106/128 (82%)
 Frame = +1

Query: 478 LICDESLMVLRKESVDWMIRVGTHYGFVALTTILAVNYFDRFLMSPSFQRDKPWMNQLVA 657
           +I D  L V R ++V+WM++V  HYGF ALT +LAVNYFDRFL S  FQRDKPWM+QL A
Sbjct: 86  IISDGFLTVARTKAVEWMLKVNAHYGFSALTAVLAVNYFDRFLSSSCFQRDKPWMSQLAA 145

Query: 658 VACLSLASKVEEIQTPLLLDLQMEGSKFVFESNTIMKMELLVLSSLQWKMNPVTPLAFFD 837
           V CLSLA+KV+E   PLLLDLQ+E +K+VFE+ TI +MELLVLSSLQWKMNPVTP++FFD
Sbjct: 146 VTCLSLAAKVDETDVPLLLDLQVEETKYVFEAKTIQRMELLVLSSLQWKMNPVTPISFFD 205

Query: 838 YIMRRLNL 861
           +I+RRL L
Sbjct: 206 HIIRRLGL 213


>ref|XP_002310704.1| predicted protein [Populus trichocarpa]
           gi|159025719|emb|CAN88860.1| D3-type cyclin [Populus
           trichocarpa] gi|222853607|gb|EEE91154.1| predicted
           protein [Populus trichocarpa]
          Length = 367

 Score =  183 bits (464), Expect = 5e-44
 Identities = 101/209 (48%), Positives = 131/209 (62%), Gaps = 1/209 (0%)
 Frame = +1

Query: 238 KQQNVCPQNPIFAIDDALLCDEQEKDLDFGYGFGLSDQENQILKEKDPPFTHXXXXXXXX 417
           ++Q+   Q+P   +D  L C+E+    D+  GF     +  I KE+              
Sbjct: 5   QEQDTHRQSPALVLD-GLYCEEEGFGEDYSCGFDDEIGDQNIKKEQTLSSVLLQQDLFWE 63

Query: 418 XXXXXXXXXXXXNTLVG-EGDLICDESLMVLRKESVDWMIRVGTHYGFVALTTILAVNYF 594
                        T V  +G    D SLMV R+E+V+W +RV  HYGF ALT +LAVNYF
Sbjct: 64  DNELLSLISKEKETHVRFDGGGSIDGSLMVARREAVEWFLRVKAHYGFSALTGVLAVNYF 123

Query: 595 DRFLMSPSFQRDKPWMNQLVAVACLSLASKVEEIQTPLLLDLQMEGSKFVFESNTIMKME 774
           DRF+ S  FQRDK WM QL AVACLSLA+KVEE   PLLLDLQ+E +K++FE+ TI +ME
Sbjct: 124 DRFISSSRFQRDKSWMGQLAAVACLSLAAKVEETHVPLLLDLQVEDAKYIFEAKTIKRME 183

Query: 775 LLVLSSLQWKMNPVTPLAFFDYIMRRLNL 861
           LLVLS+LQW+MNPVT ++FFD+I+RRL L
Sbjct: 184 LLVLSTLQWRMNPVTSISFFDHIIRRLGL 212


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