BLASTX nr result

ID: Atractylodes21_contig00015463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015463
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein lig...   236   1e-59
ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-57
ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-57
ref|XP_003548379.1| PREDICTED: probable E3 ubiquitin-protein lig...   222   2e-55
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   217   5e-54

>ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Vitis
            vinifera] gi|298204735|emb|CBI25233.3| unnamed protein
            product [Vitis vinifera]
          Length = 301

 Score =  236 bits (602), Expect = 1e-59
 Identities = 121/291 (41%), Positives = 159/291 (54%), Gaps = 10/291 (3%)
 Frame = +1

Query: 286  DDISWKSATDVIFHEDNDDIVLEDDAKYAEELQIQEALLASMLXXXXXXXXXXXXHIARQ 465
            DD  + +  D +  ED +D V+ D AKYAEELQ QEAL+AS+              I   
Sbjct: 13   DDFYFSALLDQL--EDTEDFVVSD-AKYAEELQFQEALMASVEAASNTAVQETAPSIKEI 69

Query: 466  SLSSWLKNKE--------IEVADPPLSICKICLENLESWQMFRNSTCSHSFCYECTSKHA 621
              SS   +          +E      + C+IC E     +MFR+  C H+FC  C SKH 
Sbjct: 70   GSSSGSSSAADAAVDMAVVEEGQTSENFCEICAERRGLDEMFRSGKCCHTFCSYCISKHV 129

Query: 622  TTKIQENNNTIACPGLNCKSTLDFNALRLIIPKDILIKWDELLCESTILESHKLYCPFAD 801
              KIQE+   + CP L+C+  L+ +  R I+ ++++ KW+E+ CES I  S + YCPF D
Sbjct: 130  AVKIQESVRMVTCPALSCEGVLEVDDCRGIVAREVMEKWEEVSCESIIAASQRFYCPFRD 189

Query: 802  CSVLLIND--GSSITKIDCPVCRRSFCAVCQVPWHSEFSCXXXXXXXXXXXXXXXDDMAV 975
            CS +L++D  G  I + +CPVCRR FCA C VPWHS   C               D M  
Sbjct: 190  CSAMLVDDNGGEVIRESECPVCRRLFCAACYVPWHSGVGC-EEYQMMNEDEKGREDLMLR 248

Query: 976  ALAXXXXXXXCPSCKFFVEKAEGCVHITCRCKYEFCYNCGAKWTSTHGGCR 1128
             LA       CP CKF+VEK EGC+HITCRC Y+FCY CGA+WT  HGGC+
Sbjct: 249  ELAQEKKWRRCPQCKFYVEKIEGCLHITCRCTYQFCYACGAQWTQHHGGCQ 299


>ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|222874330|gb|EEF11461.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  228 bits (580), Expect = 3e-57
 Identities = 112/302 (37%), Positives = 160/302 (52%), Gaps = 13/302 (4%)
 Frame = +1

Query: 259  ANASLQRSDDDISWKSATDVIFHEDND----DIVLEDDAKYAEELQIQEALLASMLXXXX 426
            A  SL  S+ D         +F E+ +    +I    DAKYAEELQ QE L+ S++    
Sbjct: 2    AQQSLAPSELDFVDDFYFSALFDEEQEGGGGEIFEVSDAKYAEELQFQETLMGSVIVSQM 61

Query: 427  XXXXXXXXHIARQSLSSWLKNK-------EIEVADPPLSICKICLENLESWQMFRNSTCS 585
                     I    +   + ++       ++E  +  LS C+IC E  E+ QMF+  +C 
Sbjct: 62   KSIGPSPMMIEGIPVVLPISDQPMRVEIIDLEAGESSLSFCEICAERKENDQMFKTESCV 121

Query: 586  HSFCYECTSKHATTKIQENNNTIACPGLNCKSTLDFNALRLIIPKDILIKWDELLCESTI 765
            HSFC +C S+H  TK+Q+N   + CPGL+C++ L+ +  R ++ + ++ +W+  LCE  I
Sbjct: 122  HSFCNDCISRHVATKVQDNIRIVTCPGLSCRAVLEMDTCRPVLTRGVIDRWENALCEEMI 181

Query: 766  LESHKLYCPFADCSVLLI--NDGSSITKIDCPVCRRSFCAVCQVPWHSEFSCXXXXXXXX 939
              S + YCPF DCS LL+  N+G +I + +CP C R FCA C VPWH    C        
Sbjct: 182  NASQRFYCPFKDCSALLVDDNEGETIRESECPFCHRLFCAQCSVPWHPGVDC-DEYQRLN 240

Query: 940  XXXXXXXDDMAVALAXXXXXXXCPSCKFFVEKAEGCVHITCRCKYEFCYNCGAKWTSTHG 1119
                   D M   LA       CP CKF+VE+ EGC H+ CRC++EFCY C  +W  THG
Sbjct: 241  EDERGREDLMVRELAKDKQWGRCPKCKFYVERTEGCPHMVCRCRFEFCYGCEEQWGPTHG 300

Query: 1120 GC 1125
            GC
Sbjct: 301  GC 302


>ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|222846424|gb|EEE83971.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  228 bits (580), Expect = 3e-57
 Identities = 112/302 (37%), Positives = 160/302 (52%), Gaps = 13/302 (4%)
 Frame = +1

Query: 259  ANASLQRSDDDISWKSATDVIFHEDND----DIVLEDDAKYAEELQIQEALLASMLXXXX 426
            A  SL  S+ D         +F E+ +    +I    DAKYAEELQ QE L+ S++    
Sbjct: 2    AQQSLAPSELDFVDDFYFSALFDEEQEGGGGEIFEVSDAKYAEELQFQETLMGSVIVSQM 61

Query: 427  XXXXXXXXHIARQSLSSWLKNK-------EIEVADPPLSICKICLENLESWQMFRNSTCS 585
                     I    +   + ++       ++E  +  LS C+IC E  E+ QMF+  +C 
Sbjct: 62   KSIGPSPMMIEGIPVVLPISDQPMRVEIIDLEAGESSLSFCEICAERKENDQMFKTESCV 121

Query: 586  HSFCYECTSKHATTKIQENNNTIACPGLNCKSTLDFNALRLIIPKDILIKWDELLCESTI 765
            HSFC +C S+H  TK+Q+N   + CPGL+C++ L+ +  R ++ + ++ +W+  LCE  I
Sbjct: 122  HSFCNDCISRHVATKVQDNIRIVTCPGLSCRAVLEMDTCRPVLTRGVIDRWENALCEEMI 181

Query: 766  LESHKLYCPFADCSVLLI--NDGSSITKIDCPVCRRSFCAVCQVPWHSEFSCXXXXXXXX 939
              S + YCPF DCS LL+  N+G +I + +CP C R FCA C VPWH    C        
Sbjct: 182  NASQRFYCPFKDCSALLVDDNEGETIRESECPFCHRLFCAQCSVPWHPGVDC-DEYQRLN 240

Query: 940  XXXXXXXDDMAVALAXXXXXXXCPSCKFFVEKAEGCVHITCRCKYEFCYNCGAKWTSTHG 1119
                   D M   LA       CP CKF+VE+ EGC H+ CRC++EFCY C  +W  THG
Sbjct: 241  EDERGREDLMVRELAKNKQWGRCPKCKFYVERTEGCPHMVCRCRFEFCYGCEEQWGPTHG 300

Query: 1120 GC 1125
            GC
Sbjct: 301  GC 302


>ref|XP_003548379.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-like [Glycine
            max]
          Length = 294

 Score =  222 bits (565), Expect = 2e-55
 Identities = 107/271 (39%), Positives = 146/271 (53%), Gaps = 4/271 (1%)
 Frame = +1

Query: 331  DNDDIVLEDDAKYAEELQIQEALLASMLXXXXXXXXXXXX---HIARQSLSSWLKNKEIE 501
            D ++I    D KYAEELQ+QEAL +S++                +   +    LK K  E
Sbjct: 24   DAEEIFPISDEKYAEELQLQEALYSSIISSTTKVKNEVIQVNVDVDGDTPLRTLKKKHKE 83

Query: 502  VADPPLSICKICLENLESWQMFRNSTCSHSFCYECTSKHATTKIQENNNTIACPGLNCKS 681
            + +     C IC++     ++FRN  CSHSFC +C  K+ T KIQEN +T+ CP   CK 
Sbjct: 84   IGESSQVYCGICMDAKSGEEIFRNRNCSHSFCSDCIGKYVTAKIQENISTVKCPDTKCKE 143

Query: 682  TLDFNALRLIIPKDILIKWDELLCESTILESHKLYCPFADCSVLLIND-GSSITKIDCPV 858
             ++    R IIPK++  +W+  + E+++L S K YCPF DCS + I D G  +T  +CP 
Sbjct: 144  VVEPQYCRSIIPKEVFDRWENAIFENSVLRSQKFYCPFKDCSAMYIRDAGEVVTVSECPY 203

Query: 859  CRRSFCAVCQVPWHSEFSCXXXXXXXXXXXXXXXDDMAVALAXXXXXXXCPSCKFFVEKA 1038
            C R FCA C+VPWHSE  C               D M + LA       CP C F+VE+ 
Sbjct: 204  CNRLFCAQCKVPWHSEIGC-NEFQNLKKYEREREDLMVMELAKNKSWKRCPKCDFYVERI 262

Query: 1039 EGCVHITCRCKYEFCYNCGAKWTSTHGGCRP 1131
            +GC HI+CRC  EFCY CG+ W+  H  C P
Sbjct: 263  DGCAHISCRCGNEFCYVCGSTWSCQHYNCEP 293


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
            gi|223547790|gb|EEF49282.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 308

 Score =  217 bits (553), Expect = 5e-54
 Identities = 104/277 (37%), Positives = 142/277 (51%), Gaps = 13/277 (4%)
 Frame = +1

Query: 334  NDDIVLEDDAKYAEELQIQEALLASMLXXXXXXXXXXXXHIARQSLSS-----------W 480
            +D+     DAKYAE LQ QEAL+ S++             I    +S+            
Sbjct: 30   HDETFPISDAKYAEALQFQEALMGSVMISQMKNSITTATIINTCKISNPSSLLMIEPPPV 89

Query: 481  LKNKEIEVADPPLSICKICLENLESWQMFRNSTCSHSFCYECTSKHATTKIQENNNTIAC 660
            + N   E        C+IC+E  E+ QMF   +C HSFC +C  K+  TKIQE+   + C
Sbjct: 90   VPNSPTETGQSSQIFCEICVEKKETDQMFATDSCIHSFCLDCVGKYVGTKIQESQTIVTC 149

Query: 661  PGLNCKSTLDFNALRLIIPKDILIKWDELLCESTILESHKLYCPFADCSVLLIND--GSS 834
            PG+NC++ L+ +  R  + K ++  W+E LC+  I      YCPF DCS LL+ND  G  
Sbjct: 150  PGMNCRAVLELDICRTKLAKGVIDSWEEALCKEMISTLQSFYCPFRDCSALLVNDNEGEV 209

Query: 835  ITKIDCPVCRRSFCAVCQVPWHSEFSCXXXXXXXXXXXXXXXDDMAVALAXXXXXXXCPS 1014
            I + +CP C R FCA C VPWHS   C               D M + LA       CP 
Sbjct: 210  IRESECPFCHRLFCAQCYVPWHSGIEC-EAFQRLNEDERGREDLMVIELAKEKKWSRCPK 268

Query: 1015 CKFFVEKAEGCVHITCRCKYEFCYNCGAKWTSTHGGC 1125
            C+F+VE+ +GC H+ CRC ++FCY C  +WT  HGGC
Sbjct: 269  CRFYVERTQGCPHMVCRCGFQFCYGCELEWTGNHGGC 305


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