BLASTX nr result

ID: Atractylodes21_contig00015447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015447
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27627.3| unnamed protein product [Vitis vinifera]              276   2e-72
ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPa...   276   2e-72
ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa...   273   2e-71
ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPa...   272   3e-71
ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   271   4e-71

>emb|CBI27627.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  276 bits (705), Expect = 2e-72
 Identities = 139/184 (75%), Positives = 152/184 (82%), Gaps = 2/184 (1%)
 Frame = +1

Query: 1   ISGSKWLEDQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYVADTPGFNQPSLLKVTKQSLA 180
           I GSK LE+QRVGEVSVRSGRGKHTTRHVSLLPLSGGGY+ADTPGFNQPSLLKVT QSLA
Sbjct: 207 ILGSKLLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLA 266

Query: 181 LCFPEVRKIL--SASEPSRCAFSNCLHLGEPGCLIKNDWERYPYYFQLLDEIKVREEFQL 354
             FPE+RK+L  SA+EP +C+F++CLHLGEPGC++K DWERYPYYFQLLDEIK+REEFQL
Sbjct: 267 QTFPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQL 326

Query: 355 RTXXXXXXXXXXXXXXXXXXXXXLGTKREGDVRYKMGDMGVKQAEPRLELKKHRRQSRKK 534
           RT                     LGTKREGDVRYK GDMGVKQAEPRLE KKHRRQSRK+
Sbjct: 327 RT---------------------LGTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKR 365

Query: 535 MNQS 546
           MNQS
Sbjct: 366 MNQS 369


>ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like isoform 3
           [Vitis vinifera]
          Length = 491

 Score =  276 bits (705), Expect = 2e-72
 Identities = 139/184 (75%), Positives = 152/184 (82%), Gaps = 2/184 (1%)
 Frame = +1

Query: 1   ISGSKWLEDQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYVADTPGFNQPSLLKVTKQSLA 180
           I GSK LE+QRVGEVSVRSGRGKHTTRHVSLLPLSGGGY+ADTPGFNQPSLLKVT QSLA
Sbjct: 298 ILGSKLLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLA 357

Query: 181 LCFPEVRKIL--SASEPSRCAFSNCLHLGEPGCLIKNDWERYPYYFQLLDEIKVREEFQL 354
             FPE+RK+L  SA+EP +C+F++CLHLGEPGC++K DWERYPYYFQLLDEIK+REEFQL
Sbjct: 358 QTFPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQL 417

Query: 355 RTXXXXXXXXXXXXXXXXXXXXXLGTKREGDVRYKMGDMGVKQAEPRLELKKHRRQSRKK 534
           RT                     LGTKREGDVRYK GDMGVKQAEPRLE KKHRRQSRK+
Sbjct: 418 RT---------------------LGTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKR 456

Query: 535 MNQS 546
           MNQS
Sbjct: 457 MNQS 460


>ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
           max]
          Length = 473

 Score =  273 bits (697), Expect = 2e-71
 Identities = 134/182 (73%), Positives = 149/182 (81%)
 Frame = +1

Query: 1   ISGSKWLEDQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYVADTPGFNQPSLLKVTKQSLA 180
           + GSKWLEDQRVGEVS RSGRGKHTTRHVSLLPLS GG++ADTPGFNQPSLLKVTKQSLA
Sbjct: 284 VLGSKWLEDQRVGEVSTRSGRGKHTTRHVSLLPLSEGGFLADTPGFNQPSLLKVTKQSLA 343

Query: 181 LCFPEVRKILSASEPSRCAFSNCLHLGEPGCLIKNDWERYPYYFQLLDEIKVREEFQLRT 360
             FPE+RK+LSASE  +C+F+NCLHLGEPGC++K DWERY YYFQLLDEI++REEFQLRT
Sbjct: 344 QTFPEIRKMLSASEIEKCSFNNCLHLGEPGCIVKGDWERYSYYFQLLDEIRIREEFQLRT 403

Query: 361 XXXXXXXXXXXXXXXXXXXXXLGTKREGDVRYKMGDMGVKQAEPRLELKKHRRQSRKKMN 540
                                 GTKREGDVR KMGDMGV+QAEPRLE KKHRRQSRK++N
Sbjct: 404 ---------------------FGTKREGDVRLKMGDMGVQQAEPRLEPKKHRRQSRKRIN 442

Query: 541 QS 546
           QS
Sbjct: 443 QS 444


>ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
           max]
          Length = 475

 Score =  272 bits (695), Expect = 3e-71
 Identities = 134/182 (73%), Positives = 148/182 (81%)
 Frame = +1

Query: 1   ISGSKWLEDQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYVADTPGFNQPSLLKVTKQSLA 180
           I GSKWLEDQRVGEVS RSGRGKHTTRHVSLLPLS GG++ADTPGFNQPSLLKVTKQSLA
Sbjct: 288 ILGSKWLEDQRVGEVSTRSGRGKHTTRHVSLLPLSEGGFLADTPGFNQPSLLKVTKQSLA 347

Query: 181 LCFPEVRKILSASEPSRCAFSNCLHLGEPGCLIKNDWERYPYYFQLLDEIKVREEFQLRT 360
             FPE+RK+LSA+E  +C+F+NCLHLGEPGC++K DWERY YYFQLLDEI++REEFQLRT
Sbjct: 348 QTFPEIRKMLSANETEKCSFNNCLHLGEPGCIVKGDWERYSYYFQLLDEIRIREEFQLRT 407

Query: 361 XXXXXXXXXXXXXXXXXXXXXLGTKREGDVRYKMGDMGVKQAEPRLELKKHRRQSRKKMN 540
                                 GTKREGDVR KMGDMGV+QAEPRLE KKHRRQSRK +N
Sbjct: 408 ---------------------FGTKREGDVRLKMGDMGVQQAEPRLEPKKHRRQSRKSIN 446

Query: 541 QS 546
           QS
Sbjct: 447 QS 448


>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
           sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
           putative ribosome biogenesis GTPase RsgA-like [Cucumis
           sativus]
          Length = 504

 Score =  271 bits (694), Expect = 4e-71
 Identities = 131/182 (71%), Positives = 150/182 (82%)
 Frame = +1

Query: 1   ISGSKWLEDQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYVADTPGFNQPSLLKVTKQSLA 180
           I GSKW E+QRV EVS RSGRGKHTTRHVSLLPLSGGGY+ADTPGFNQPSL+K+TKQSLA
Sbjct: 315 ILGSKWFEEQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLA 374

Query: 181 LCFPEVRKILSASEPSRCAFSNCLHLGEPGCLIKNDWERYPYYFQLLDEIKVREEFQLRT 360
             FPE++K+L ASEP++C+F++CLHLGEPGC+IK DWERY YYFQLLDEI++REEFQLRT
Sbjct: 375 QAFPEIQKMLHASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRT 434

Query: 361 XXXXXXXXXXXXXXXXXXXXXLGTKREGDVRYKMGDMGVKQAEPRLELKKHRRQSRKKMN 540
                                 GTKREGDVR K+G+MGVKQAEPRLELKKHRRQSRK++N
Sbjct: 435 ---------------------FGTKREGDVRIKVGEMGVKQAEPRLELKKHRRQSRKRVN 473

Query: 541 QS 546
           QS
Sbjct: 474 QS 475


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