BLASTX nr result

ID: Atractylodes21_contig00015331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015331
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   223   2e-56
sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-...   195   7e-48
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ...   189   5e-46
ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   186   3e-45
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [...   184   1e-44

>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 127

 Score =  223 bits (568), Expect = 2e-56
 Identities = 113/124 (91%), Positives = 117/124 (94%)
 Frame = -3

Query: 395 VEEGRGFSNAEKDPITSKELNEEPYEVKISCTVL*SGSKGDLSVNFSTITPKKPNSALRK 216
           +EEGR FSN EKDP+TSKELNEEPYEV+IS TVL SG KGDLSVNFSTITPKKPNSALRK
Sbjct: 1   MEEGRRFSNEEKDPMTSKELNEEPYEVQISRTVLSSGCKGDLSVNFSTITPKKPNSALRK 60

Query: 215 VARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQ 36
           VARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRVKDLPG+RYHIVRG LDAVGVKDRQ
Sbjct: 61  VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGLRYHIVRGNLDAVGVKDRQ 120

Query: 35  QGRS 24
           QGRS
Sbjct: 121 QGRS 124


>sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-B, chloroplastic
           gi|133712086|gb|ABO36729.1| 30S ribosomal protein S12
           [Populus trichocarpa]
          Length = 135

 Score =  195 bits (495), Expect = 7e-48
 Identities = 97/102 (95%), Positives = 100/102 (98%)
 Frame = -3

Query: 308 SCTVL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV 129
           +CT + SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV
Sbjct: 33  TCTRVYSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV 92

Query: 128 LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVKKP 3
           LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS+YGVKKP
Sbjct: 93  LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSQYGVKKP 134


>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
           gi|350996572|gb|AEQ37083.1| ribosomal protein S12
           [Datura stramonium]
          Length = 137

 Score =  189 bits (479), Expect = 5e-46
 Identities = 96/98 (97%), Positives = 96/98 (97%)
 Frame = -3

Query: 317 VKISCTVL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEH 138
           V ISCTVL SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEH
Sbjct: 37  VYISCTVLKSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEH 96

Query: 137 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 24
           SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 97  SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 134


>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 117

 Score =  186 bits (473), Expect = 3e-45
 Identities = 97/115 (84%), Positives = 103/115 (89%)
 Frame = -3

Query: 440 HENVTKLVLVTLRDGVEEGRGFSNAEKDPITSKELNEEPYEVKISCTVL*SGSKGDLSVN 261
           +ENVT+LV VTLRDG+EEGR FSN EKDP+TSKELNEEPYEVKIS TVL SGSKGDLSVN
Sbjct: 2   NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVN 61

Query: 260 FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLP 96
           FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVV V G  ++  P
Sbjct: 62  FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVFVGGEGLRIYP 116


>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
           gi|355488626|gb|AES69829.1| NAD(P)H-quinone
           oxidoreductase subunit 2 A [Medicago truncatula]
          Length = 871

 Score =  184 bits (468), Expect = 1e-44
 Identities = 97/119 (81%), Positives = 100/119 (84%)
 Frame = -3

Query: 377 FSNAEKDPITSKELNEEPYEVKISCTVL*SGSKGDLSVNFSTITPKKPNSALRKVARVRL 198
           FSN EKDPITSKELNE+               K DLSVNFSTITPKKPNSALRKVARVRL
Sbjct: 62  FSNEEKDPITSKELNED---------------KDDLSVNFSTITPKKPNSALRKVARVRL 106

Query: 197 TSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSK 21
           TSGFEITAYIPGIGHN QEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG ++
Sbjct: 107 TSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGTAE 165


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