BLASTX nr result

ID: Atractylodes21_contig00015121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015121
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis...   100   5e-34
ref|XP_002322597.1| global transcription factor group [Populus t...    98   5e-34
ref|XP_002307949.1| global transcription factor group [Populus t...    96   3e-33
ref|XP_002278416.2| PREDICTED: transcription elongation factor S...    94   2e-32
emb|CBI32841.3| unnamed protein product [Vitis vinifera]               94   2e-32

>ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis]
           gi|223536178|gb|EEF37832.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 1650

 Score =  100 bits (250), Expect(2) = 5e-34
 Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +2

Query: 14  RFQVPFIATYRKEECQSLFMDPKSQ-VDEENQNNSDQKPILR*HKVLWDISELDRKWLLL 190
           +   PFIA YRKE+C SL  DP+   +D+EN + SD+KPIL+ HKVLW I +LDRKWLLL
Sbjct: 353 KLDTPFIAMYRKEDCLSLLKDPEQHDIDDENPDKSDRKPILKWHKVLWAIQDLDRKWLLL 412

Query: 191 QERKSALQVYYNKRLKK 241
           Q+RK+AL +YYNKR ++
Sbjct: 413 QKRKNALNLYYNKRFEE 429



 Score = 68.6 bits (166), Expect(2) = 5e-34
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +1

Query: 235 EEE*SIYDETRLHLNQKLFDSITKYLKVAESEKEIEDVDSKFNLQFPLG 381
           EE   IYDETRL+LNQ+LF SI K L+ AESE+E++DVD+KFNL FP G
Sbjct: 429 EESRRIYDETRLNLNQQLFKSILKSLEAAESEREVDDVDAKFNLHFPPG 477


>ref|XP_002322597.1| global transcription factor group [Populus trichocarpa]
           gi|222867227|gb|EEF04358.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1216

 Score = 98.2 bits (243), Expect(2) = 5e-34
 Identities = 44/76 (57%), Positives = 55/76 (72%)
 Frame = +2

Query: 14  RFQVPFIATYRKEECQSLFMDPKSQVDEENQNNSDQKPILR*HKVLWDISELDRKWLLLQ 193
           +  +PFIA YRKEEC SL  DP    D EN +++D+ P  + HKVLW I +LDRKWLLLQ
Sbjct: 137 KLDIPFIAMYRKEECLSLLKDPDQHEDNENYDDTDKNPTFKWHKVLWAIQDLDRKWLLLQ 196

Query: 194 ERKSALQVYYNKRLKK 241
           +RKSAL  YYNKR ++
Sbjct: 197 KRKSALNSYYNKRFEE 212



 Score = 71.2 bits (173), Expect(2) = 5e-34
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +1

Query: 235 EEE*SIYDETRLHLNQKLFDSITKYLKVAESEKEIEDVDSKFNLQFPLG 381
           EE   IYDETRL+LNQ+LF+SI K LK AESE+E++DVD+KFNL FP G
Sbjct: 212 EESRRIYDETRLNLNQQLFESILKSLKTAESEREVDDVDAKFNLHFPPG 260


>ref|XP_002307949.1| global transcription factor group [Populus trichocarpa]
           gi|222853925|gb|EEE91472.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1648

 Score = 95.5 bits (236), Expect(2) = 3e-33
 Identities = 43/76 (56%), Positives = 55/76 (72%)
 Frame = +2

Query: 14  RFQVPFIATYRKEECQSLFMDPKSQVDEENQNNSDQKPILR*HKVLWDISELDRKWLLLQ 193
           +  +PFIA YRKEEC SL  DP+   D+EN  ++ + P  + HKVLW I +LDRKWLLLQ
Sbjct: 340 KLDIPFIAMYRKEECLSLLKDPEQHEDDENPYDTGRIPTFKWHKVLWAIQDLDRKWLLLQ 399

Query: 194 ERKSALQVYYNKRLKK 241
           +RKSAL  YYNKR ++
Sbjct: 400 KRKSALNAYYNKRFEE 415



 Score = 71.2 bits (173), Expect(2) = 3e-33
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +1

Query: 235 EEE*SIYDETRLHLNQKLFDSITKYLKVAESEKEIEDVDSKFNLQFPLG 381
           EE   IYDETRL+LNQ+LF+SI K LK AESE+E++DVD+KFNL FP G
Sbjct: 415 EESRRIYDETRLNLNQQLFESILKSLKTAESEREVDDVDAKFNLHFPPG 463


>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
           vinifera]
          Length = 1660

 Score = 94.0 bits (232), Expect(2) = 2e-32
 Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +2

Query: 14  RFQVPFIATYRKEECQSLFMDPKS-QVDEENQNNSDQKPILR*HKVLWDISELDRKWLLL 190
           +  VPFIA YRKEEC SL  DP   + D+ N +N ++ P L+ HKVLW I +LDRKWLLL
Sbjct: 352 KLDVPFIAMYRKEECLSLLKDPDQLEADDGNLDNPEKTPKLKWHKVLWAIQDLDRKWLLL 411

Query: 191 QERKSALQVYYNKRLKK 241
           Q+RKSALQ YYN+R ++
Sbjct: 412 QKRKSALQSYYNRRFEE 428



 Score = 70.1 bits (170), Expect(2) = 2e-32
 Identities = 34/49 (69%), Positives = 39/49 (79%)
 Frame = +1

Query: 235 EEE*SIYDETRLHLNQKLFDSITKYLKVAESEKEIEDVDSKFNLQFPLG 381
           EE   IYDETRL LNQ+LF+SI K LK AESE+E++D DSKFNL FP G
Sbjct: 428 EESRRIYDETRLSLNQQLFESIIKSLKAAESEREVDDADSKFNLHFPPG 476


>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
          Length = 1646

 Score = 94.0 bits (232), Expect(2) = 2e-32
 Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +2

Query: 14  RFQVPFIATYRKEECQSLFMDPKS-QVDEENQNNSDQKPILR*HKVLWDISELDRKWLLL 190
           +  VPFIA YRKEEC SL  DP   + D+ N +N ++ P L+ HKVLW I +LDRKWLLL
Sbjct: 353 KLDVPFIAMYRKEECLSLLKDPDQLEADDGNLDNPEKTPKLKWHKVLWAIQDLDRKWLLL 412

Query: 191 QERKSALQVYYNKRLKK 241
           Q+RKSALQ YYN+R ++
Sbjct: 413 QKRKSALQSYYNRRFEE 429



 Score = 70.1 bits (170), Expect(2) = 2e-32
 Identities = 34/49 (69%), Positives = 39/49 (79%)
 Frame = +1

Query: 235 EEE*SIYDETRLHLNQKLFDSITKYLKVAESEKEIEDVDSKFNLQFPLG 381
           EE   IYDETRL LNQ+LF+SI K LK AESE+E++D DSKFNL FP G
Sbjct: 429 EESRRIYDETRLSLNQQLFESIIKSLKAAESEREVDDADSKFNLHFPPG 477


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