BLASTX nr result

ID: Atractylodes21_contig00015082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015082
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...    62   8e-18
ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-...    62   1e-17
ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-...    59   2e-14
gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]     61   3e-12
gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]               56   8e-12

>ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
           1-like [Cucumis sativus]
          Length = 1987

 Score = 62.0 bits (149), Expect(2) = 8e-18
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = -3

Query: 147 LNKQKNKNTIAFLKTGAG*TLTAVLHPKSV*NDLHRQVKKVLAVFLVPK 1
           L + K KNTIAFL+TGAG TL AVL  KS+ NDL  Q KK+LAVFLVPK
Sbjct: 336 LEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVFLVPK 384



 Score = 53.5 bits (127), Expect(2) = 8e-18
 Identities = 31/63 (49%), Positives = 39/63 (61%)
 Frame = -2

Query: 316 DMVFCRGSWEAGCNRDVKAPVEKKSLL*PTRIKT*QRKNSKIKTPKERARKYQLDILEQA 137
           DMVF  G WEA  NRD     +K      T  K+  R+  K K P+E+AR+YQLD+LEQA
Sbjct: 281 DMVFHSGMWEADRNRDAMTDNDKNLEFQGTADKSXPRRLKK-KLPEEQARQYQLDVLEQA 339

Query: 136 KKQ 128
           KK+
Sbjct: 340 KKK 342



 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = -1

Query: 572 GYQASHYCGEMGQDFWDARRWQSQY 498
           GYQ  HYCGEMGQDFWDARRWQ ++
Sbjct: 400 GYQVGHYCGEMGQDFWDARRWQREF 424


>ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
          Length = 1986

 Score = 62.0 bits (149), Expect(2) = 1e-17
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = -3

Query: 147 LNKQKNKNTIAFLKTGAG*TLTAVLHPKSV*NDLHRQVKKVLAVFLVPK 1
           L + K KNTIAFL+TGAG TL AVL  KS+ NDL  Q KK+LAVFLVPK
Sbjct: 335 LEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVFLVPK 383



 Score = 53.1 bits (126), Expect(2) = 1e-17
 Identities = 31/63 (49%), Positives = 38/63 (60%)
 Frame = -2

Query: 316 DMVFCRGSWEAGCNRDVKAPVEKKSLL*PTRIKT*QRKNSKIKTPKERARKYQLDILEQA 137
           DMVF  G WEA  NRD     +K      T  K+   K  K K P+E+AR+YQLD+LEQA
Sbjct: 281 DMVFHSGMWEADRNRDAMTDNDKNLEFQGTADKS--SKEIKEKIPEEQARQYQLDVLEQA 338

Query: 136 KKQ 128
           KK+
Sbjct: 339 KKK 341



 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = -1

Query: 572 GYQASHYCGEMGQDFWDARRWQSQY 498
           GYQ  HYCGEMGQDFWDARRWQ ++
Sbjct: 399 GYQVGHYCGEMGQDFWDARRWQREF 423


>ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1944

 Score = 59.3 bits (142), Expect(2) = 2e-14
 Identities = 32/49 (65%), Positives = 38/49 (77%)
 Frame = -3

Query: 147 LNKQKNKNTIAFLKTGAG*TLTAVLHPKSV*NDLHRQVKKVLAVFLVPK 1
           L + K KNTIAFL+TGAG TL AVL  KS+ + L +Q KK+LAVFLVPK
Sbjct: 296 LEQSKRKNTIAFLETGAGKTLIAVLLIKSIQDSLQKQNKKMLAVFLVPK 344



 Score = 45.1 bits (105), Expect(2) = 2e-14
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = -2

Query: 316 DMVFCRGSWEAGCNRDVKAPVEKKSLL*PTRIKT*QRKNSKI-KTPKERARKYQLDILEQ 140
           DM+F  G+WE   NRD K  ++ K        K  ++    I + P+E+AR+YQLD+LEQ
Sbjct: 242 DMIFRTGAWEPDHNRDDKMVIDTKL---ENYGKLDKKSEDAIERVPEEKARQYQLDVLEQ 298

Query: 139 AKKQ 128
           +K++
Sbjct: 299 SKRK 302



 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = -1

Query: 572 GYQASHYCGEMGQDFWDARRWQSQY 498
           GYQ  HYCGEMGQDFWDARRWQ ++
Sbjct: 360 GYQVGHYCGEMGQDFWDARRWQREF 384


>gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
          Length = 1690

 Score = 60.8 bits (146), Expect(2) = 3e-12
 Identities = 32/49 (65%), Positives = 38/49 (77%)
 Frame = -3

Query: 147 LNKQKNKNTIAFLKTGAG*TLTAVLHPKSV*NDLHRQVKKVLAVFLVPK 1
           L   + K TIAFL+TGAG TL A+L  KS+ NDLH+Q KK+LAVFLVPK
Sbjct: 38  LEHARKKXTIAFLETGAGKTLIAILLMKSLCNDLHKQNKKMLAVFLVPK 86



 Score = 35.8 bits (81), Expect(2) = 3e-12
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -2

Query: 196 KIKTPKERARKYQLDILEQAKKQ 128
           K + PKE+ARKYQLD+LE A+K+
Sbjct: 22  KEQAPKEQARKYQLDVLEHARKK 44


>gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
          Length = 2024

 Score = 55.8 bits (133), Expect(2) = 8e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = -3

Query: 147 LNKQKNKNTIAFLKTGAG*TLTAVLHPKSV*NDLHRQVKKVLAVFLVPK 1
           L + K KNTIAFL+TGAG TL A+L  KSV  DL  Q +K+L+VFLVPK
Sbjct: 257 LEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPK 305



 Score = 39.3 bits (90), Expect(2) = 8e-12
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = -2

Query: 316 DMVFCRGSWEAGCNRDVKAPVEKKSLL*PTRIKT*QRKNS----KIKTPKERARKYQLDI 149
           ++V+  G+WEA   RDVK             +K  + K+     K K  +E+AR+YQLD+
Sbjct: 200 ELVYRSGTWEADHERDVKKVSGGNR---ECDVKAEENKSKPEERKEKVVEEQARRYQLDV 256

Query: 148 LEQAK 134
           LEQAK
Sbjct: 257 LEQAK 261


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