BLASTX nr result

ID: Atractylodes21_contig00015025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015025
         (1623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]   399   e-108
ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1...   399   e-108
ref|NP_193573.1| F-box protein [Arabidopsis thaliana] gi|3341866...   392   e-106
ref|XP_004163869.1| PREDICTED: F-box protein At5g46170-like, par...   392   e-106
ref|XP_004134599.1| PREDICTED: F-box protein At5g46170-like [Cuc...   392   e-106

>emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]
          Length = 399

 Score =  399 bits (1025), Expect = e-108
 Identities = 206/244 (84%), Positives = 223/244 (91%), Gaps = 7/244 (2%)
 Frame = -2

Query: 1064 VTHHSPTQVLKNFSEIRFLKIELPSGELGIEDDVLLKWRADFGSTLDNCVMLGASSVVHP 885
            VTHHSPTQVLKNF+EIRFL+IELPSGELGIED VLLKWRADFGSTLDNCV+LGA+SV+ P
Sbjct: 156  VTHHSPTQVLKNFNEIRFLRIELPSGELGIEDGVLLKWRADFGSTLDNCVILGAASVICP 215

Query: 884  DNFTSS---ESSYDSVC---GIDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 723
                 S   +S  D+ C   G DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ
Sbjct: 216  GPTKGSGVQDSGXDAFCVSNGGDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 275

Query: 722  PIIAEHKTLDSLVLTDADRQGVLCMNKEQLEELRVKPLSASSAAKRTLVPALNMKLWYAP 543
            PIIAEHKTLDSLVLTDAD QGVLCMN++QLEELRVKPLSASSA+KRTLVPALNM+LWYAP
Sbjct: 276  PIIAEHKTLDSLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAP 335

Query: 542  YLELPNGTVLKGATLVAIRPSEQS-GQKEVSDGSWVSSAFEEPYGTAARMLLKRRTYCLE 366
            +LELP+G VLKGATLVAIRPSEQS  +KEVSDGSWVS+AFEEPYGTAA+ML+KRRTYCLE
Sbjct: 336  HLELPDGIVLKGATLVAIRPSEQSVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLE 395

Query: 365  MNSF 354
            MNSF
Sbjct: 396  MNSF 399



 Score =  110 bits (275), Expect = 1e-21
 Identities = 64/128 (50%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
 Frame = -1

Query: 1602 MVSSLRPDLTNKIYPEP---PYTFSSPEEGXXXXXXXXXXXXXLVFNKIGDVRALGRCCV 1432
            M SS+RPD + +I+PEP   P       E              LVFNKIGDV+ALGRCCV
Sbjct: 1    MASSMRPDPSTRIWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCV 60

Query: 1431 VSKRFHTLXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSRGPFSSLVRLVFGGIVKPIQAL 1252
            VS+RFHTL                           +KSRGPFS L RLVFGGIVKP+QAL
Sbjct: 61   VSRRFHTLVPQVENVVVRVDCVISDDESSSAAGSLEKSRGPFSHLFRLVFGGIVKPLQAL 120

Query: 1251 GQFLGPKR 1228
            GQFLGPKR
Sbjct: 121  GQFLGPKR 128


>ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1 [Vitis vinifera]
            gi|359483890|ref|XP_003633032.1| PREDICTED: F-box protein
            At5g46170 isoform 2 [Vitis vinifera]
          Length = 399

 Score =  399 bits (1024), Expect = e-108
 Identities = 206/244 (84%), Positives = 223/244 (91%), Gaps = 7/244 (2%)
 Frame = -2

Query: 1064 VTHHSPTQVLKNFSEIRFLKIELPSGELGIEDDVLLKWRADFGSTLDNCVMLGASSVVHP 885
            VTHHSPTQVLKNF+EIRFL+IELPSGELGIED VLLKWRADFGSTLDNCV+LGA+SV+ P
Sbjct: 156  VTHHSPTQVLKNFNEIRFLRIELPSGELGIEDGVLLKWRADFGSTLDNCVILGAASVICP 215

Query: 884  DNFTSS---ESSYDSVC---GIDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 723
                 S   +S  D+ C   G DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ
Sbjct: 216  GPTKGSGVQDSGNDAFCVSNGGDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 275

Query: 722  PIIAEHKTLDSLVLTDADRQGVLCMNKEQLEELRVKPLSASSAAKRTLVPALNMKLWYAP 543
            PIIAEHKTLDSLVLTDAD QGVLCMN++QLEELRVKPLSASSA+KRTLVPALNM+LWYAP
Sbjct: 276  PIIAEHKTLDSLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAP 335

Query: 542  YLELPNGTVLKGATLVAIRPSEQS-GQKEVSDGSWVSSAFEEPYGTAARMLLKRRTYCLE 366
            +LELP+G VLKGATLVAIRPSEQS  +KEVSDGSWVS+AFEEPYGTAA+ML+KRRTYCLE
Sbjct: 336  HLELPDGIVLKGATLVAIRPSEQSVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLE 395

Query: 365  MNSF 354
            MNSF
Sbjct: 396  MNSF 399



 Score =  110 bits (275), Expect = 1e-21
 Identities = 64/128 (50%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
 Frame = -1

Query: 1602 MVSSLRPDLTNKIYPEP---PYTFSSPEEGXXXXXXXXXXXXXLVFNKIGDVRALGRCCV 1432
            M SS+RPD + +I+PEP   P       E              LVFNKIGDV+ALGRCCV
Sbjct: 1    MASSMRPDPSTRIWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCV 60

Query: 1431 VSKRFHTLXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSRGPFSSLVRLVFGGIVKPIQAL 1252
            VS+RFHTL                           +KSRGPFS L RLVFGGIVKP+QAL
Sbjct: 61   VSRRFHTLVPQVENVVVRVDCVISDDESSSAAGSLEKSRGPFSHLFRLVFGGIVKPLQAL 120

Query: 1251 GQFLGPKR 1228
            GQFLGPKR
Sbjct: 121  GQFLGPKR 128


>ref|NP_193573.1| F-box protein [Arabidopsis thaliana] gi|334186666|ref|NP_001190761.1|
            F-box protein [Arabidopsis thaliana]
            gi|75219634|sp|O49508.1|FB237_ARATH RecName: Full=F-box
            protein At4g18380 gi|2832643|emb|CAA16718.1| hypothetical
            protein [Arabidopsis thaliana] gi|7268631|emb|CAB78840.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|119360149|gb|ABL66803.1| At4g18380 [Arabidopsis
            thaliana] gi|332658637|gb|AEE84037.1| F-box protein
            [Arabidopsis thaliana] gi|332658638|gb|AEE84038.1| F-box
            protein [Arabidopsis thaliana]
          Length = 380

 Score =  392 bits (1007), Expect = e-106
 Identities = 197/237 (83%), Positives = 216/237 (91%)
 Frame = -2

Query: 1064 VTHHSPTQVLKNFSEIRFLKIELPSGELGIEDDVLLKWRADFGSTLDNCVMLGASSVVHP 885
            VTHHSPTQVLKNF EI+FLKIELPSGELGI+D VLLKWRA+FGSTL+NCV+LGASSV+ P
Sbjct: 146  VTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSVIPP 205

Query: 884  DNFTSSESSYDSVCGIDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH 705
             N   +E+S   V  ++DNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH
Sbjct: 206  TNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH 265

Query: 704  KTLDSLVLTDADRQGVLCMNKEQLEELRVKPLSASSAAKRTLVPALNMKLWYAPYLELPN 525
            KTLDSLVLTD D QGVLCMN++QLEELRVKPLSASSA+KRTLVPALNM+LWYAP LELP+
Sbjct: 266  KTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAPSLELPD 325

Query: 524  GTVLKGATLVAIRPSEQSGQKEVSDGSWVSSAFEEPYGTAARMLLKRRTYCLEMNSF 354
            GTVLKGATLVAIRPSE   +KEV D SWVSSAF+EPYG AA+ML+KRRTYCLEMNSF
Sbjct: 326  GTVLKGATLVAIRPSE--SKKEVCDVSWVSSAFDEPYGVAAKMLVKRRTYCLEMNSF 380



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
 Frame = -1

Query: 1479 VFNKIGDVRALGRCCVVSKRFHTLXXXXXXXXXXXXXXXXXXXXXXXXXXXDKS---RGP 1309
            +FN IGDV+ALGRC VVSKRFH+L                            +S     P
Sbjct: 36   IFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSLLSDKPRSASAASP 95

Query: 1308 FSSLVRLVFGGIVKPIQALGQFL 1240
            FS++ RLVF    KP+QALGQFL
Sbjct: 96   FSAIFRLVF----KPLQALGQFL 114


>ref|XP_004163869.1| PREDICTED: F-box protein At5g46170-like, partial [Cucumis sativus]
          Length = 421

 Score =  392 bits (1006), Expect = e-106
 Identities = 198/245 (80%), Positives = 221/245 (90%), Gaps = 8/245 (3%)
 Frame = -2

Query: 1064 VTHHSPTQVLKNFSEIRFLKIELPSGELGIEDDVLLKWRADFGSTLDNCVMLGASSVVHP 885
            VTHHSPTQVLKNF+EIRFL+IELPSGELGI+D +LLKWRADFGSTLDNCV+LGA+SV+H 
Sbjct: 177  VTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGILLKWRADFGSTLDNCVILGAASVIHV 236

Query: 884  DNFTS--SESSYDSVCG-----IDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLL 726
             +F     E+  D  C       DD+GSIPESFYTNGGLKLRVVWTISSLIAASARHYLL
Sbjct: 237  GSFNKHVQENGTDGFCSGNGPAADDSGSIPESFYTNGGLKLRVVWTISSLIAASARHYLL 296

Query: 725  QPIIAEHKTLDSLVLTDADRQGVLCMNKEQLEELRVKPLSASSAAKRTLVPALNMKLWYA 546
            QPIIAEHKTLD+LVLTDAD QG+LCMNK+QLEELRVKPLSAS+A+KRTLVPALNM+LWYA
Sbjct: 297  QPIIAEHKTLDNLVLTDADGQGMLCMNKDQLEELRVKPLSASTASKRTLVPALNMRLWYA 356

Query: 545  PYLELPNGTVLKGATLVAIRPSEQS-GQKEVSDGSWVSSAFEEPYGTAARMLLKRRTYCL 369
            P+LELP G VLKGATLVAIRPSEQS  +KEVSDGSW+S+AFEEPYGTAA++L+KRRTYCL
Sbjct: 357  PHLELPGGIVLKGATLVAIRPSEQSMTKKEVSDGSWLSNAFEEPYGTAAKILVKRRTYCL 416

Query: 368  EMNSF 354
            EMNSF
Sbjct: 417  EMNSF 421



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 43/84 (51%), Positives = 52/84 (61%)
 Frame = -1

Query: 1479 VFNKIGDVRALGRCCVVSKRFHTLXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSRGPFSS 1300
            +FN+IGDV+ALGRCC VS+RFH++                           DKSR  FS+
Sbjct: 61   IFNRIGDVKALGRCCAVSRRFHSIVSQVDNVVVRVDCVISDDDFSSASSSSDKSRSGFSN 120

Query: 1299 LVRLVFGGIVKPIQALGQFLGPKR 1228
            L R+V GGIVKP+QALGQFLGPKR
Sbjct: 121  LFRMVLGGIVKPLQALGQFLGPKR 144


>ref|XP_004134599.1| PREDICTED: F-box protein At5g46170-like [Cucumis sativus]
          Length = 407

 Score =  392 bits (1006), Expect = e-106
 Identities = 198/245 (80%), Positives = 221/245 (90%), Gaps = 8/245 (3%)
 Frame = -2

Query: 1064 VTHHSPTQVLKNFSEIRFLKIELPSGELGIEDDVLLKWRADFGSTLDNCVMLGASSVVHP 885
            VTHHSPTQVLKNF+EIRFL+IELPSGELGI+D +LLKWRADFGSTLDNCV+LGA+SV+H 
Sbjct: 163  VTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGILLKWRADFGSTLDNCVILGAASVIHV 222

Query: 884  DNFTS--SESSYDSVCG-----IDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLL 726
             +F     E+  D  C       DD+GSIPESFYTNGGLKLRVVWTISSLIAASARHYLL
Sbjct: 223  GSFNKHVQENGTDGFCSGNGPAADDSGSIPESFYTNGGLKLRVVWTISSLIAASARHYLL 282

Query: 725  QPIIAEHKTLDSLVLTDADRQGVLCMNKEQLEELRVKPLSASSAAKRTLVPALNMKLWYA 546
            QPIIAEHKTLD+LVLTDAD QG+LCMNK+QLEELRVKPLSAS+A+KRTLVPALNM+LWYA
Sbjct: 283  QPIIAEHKTLDNLVLTDADGQGMLCMNKDQLEELRVKPLSASTASKRTLVPALNMRLWYA 342

Query: 545  PYLELPNGTVLKGATLVAIRPSEQS-GQKEVSDGSWVSSAFEEPYGTAARMLLKRRTYCL 369
            P+LELP G VLKGATLVAIRPSEQS  +KEVSDGSW+S+AFEEPYGTAA++L+KRRTYCL
Sbjct: 343  PHLELPGGIVLKGATLVAIRPSEQSMTKKEVSDGSWLSNAFEEPYGTAAKILVKRRTYCL 402

Query: 368  EMNSF 354
            EMNSF
Sbjct: 403  EMNSF 407



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 43/84 (51%), Positives = 52/84 (61%)
 Frame = -1

Query: 1479 VFNKIGDVRALGRCCVVSKRFHTLXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSRGPFSS 1300
            +FN+IGDV+ALGRCC VS+RFH++                           DKSR  FS+
Sbjct: 47   IFNRIGDVKALGRCCAVSRRFHSIVSQVDNVVVRVDCVISDDDFSSASSSSDKSRSGFSN 106

Query: 1299 LVRLVFGGIVKPIQALGQFLGPKR 1228
            L R+V GGIVKP+QALGQFLGPKR
Sbjct: 107  LFRMVLGGIVKPLQALGQFLGPKR 130


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