BLASTX nr result

ID: Atractylodes21_contig00014965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014965
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 54   7e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         56   7e-09
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                54   7e-09
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    55   9e-09
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...    55   9e-09

>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 53.9 bits (128), Expect(2) = 7e-09
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = -2

Query: 257 LNLFGCPMYTWVDNGKLEPKAIMCVFLGYIMRVKGY 150
           L +FGC  Y  VDNGKLEP+ I C+FLGY   VKGY
Sbjct: 644 LKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGY 679



 Score = 30.8 bits (68), Expect(2) = 7e-09
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = -1

Query: 129 KKVIISRYLTFYENYMIHGIASPPSTIEGSYEVTKDRAQVGVE 1
           KKV+ISRY+ F+E+ M+H   S    +E     ++++A V ++
Sbjct: 687 KKVVISRYVVFHESVMLHDKPSTNIPVE-----SQEKASVQIQ 724


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 55.8 bits (133), Expect(2) = 7e-09
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = -2

Query: 257 LNLFGCPMYTWVDNGKLEPKAIMCVFLGYIMRVKGY 150
           L +FGC  Y  VDNGKLEP+AI C+FLGY   VKGY
Sbjct: 658 LKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGY 693



 Score = 28.9 bits (63), Expect(2) = 7e-09
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -1

Query: 129 KKVIISRYLTFYENYMIHGIASPPSTIEGSYEVTKDRAQVGVE 1
           KKV+ISR + F+E+ M+H   S    +E     ++++A V VE
Sbjct: 701 KKVVISRNVVFHESIMLHDKPSTNVPVE-----SQEKASVQVE 738


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 53.9 bits (128), Expect(2) = 7e-09
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = -2

Query: 257 LNLFGCPMYTWVDNGKLEPKAIMCVFLGYIMRVKGY 150
           L +FGC  Y  VDNGKLEP+ I C+FLGY   VKGY
Sbjct: 476 LKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGY 511



 Score = 30.8 bits (68), Expect(2) = 7e-09
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = -1

Query: 129 KKVIISRYLTFYENYMIHGIASPPSTIEGSYEVTKDRAQVGVE 1
           KKV+ISRY+ F+E+ M+H   S    +E     ++++A V ++
Sbjct: 519 KKVVISRYVVFHESVMLHDKPSTNIPVE-----SQEKASVQIQ 556


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score = 55.5 bits (132), Expect(2) = 9e-09
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = -2

Query: 257 LNLFGCPMYTWVDNGKLEPKAIMCVFLGYIMRVKGY 150
           L +FGC  Y  VDNGKLEP+AI C+FLGY   VKGY
Sbjct: 866 LRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGY 901



 Score = 28.9 bits (63), Expect(2) = 9e-09
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -1

Query: 129  KKVIISRYLTFYENYMIHGIASPPSTIEGSYEVTKDRAQVGVE 1
            KKV+ISR + F+E+ M+H   S    +E     ++++A V VE
Sbjct: 909  KKVVISRNVVFHESVMLHDKPSTNVPVE-----SQEKASVQVE 946


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score = 55.5 bits (132), Expect(2) = 9e-09
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = -2

Query: 257 LNLFGCPMYTWVDNGKLEPKAIMCVFLGYIMRVKGY 150
           L +FGC  Y  VDNGKLEP+AI C+FLGY   VKGY
Sbjct: 659 LRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGY 694



 Score = 28.9 bits (63), Expect(2) = 9e-09
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -1

Query: 129 KKVIISRYLTFYENYMIHGIASPPSTIEGSYEVTKDRAQVGVE 1
           KKV+ISR + F+E+ M+H   S    +E     ++++A V VE
Sbjct: 702 KKVVISRNVVFHESVMLHDKPSTNVPVE-----SQEKASVQVE 739


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