BLASTX nr result
ID: Atractylodes21_contig00014920
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00014920
(226 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW70219.1| polyubiquitin-like protein [Zea mays] 92 4e-17
gb|AFW66438.1| putative ubiquitin family protein, partial [Zea m... 92 4e-17
dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana] 92 4e-17
prf||1908225A ubiquitin 84 9e-15
gb|ADY49558.1| Polyubiquitin-C, partial [Ascaris suum] 84 9e-15
>gb|AFW70219.1| polyubiquitin-like protein [Zea mays]
Length = 502
Score = 92.0 bits (227), Expect = 4e-17
Identities = 49/69 (71%), Positives = 56/69 (81%)
Frame = +2
Query: 20 DSFHNVKVKIQEKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKE 199
D+ NVK KIQ KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKE
Sbjct: 325 DTIDNVKAKIQ-KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 383
Query: 200 GIPPYQQRL 226
GIPP QQRL
Sbjct: 384 GIPPDQQRL 392
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 411 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 468
Score = 67.4 bits (163), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +2
Query: 98 MQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
MQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 43
Score = 62.4 bits (150), Expect = 4e-08
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQ 190
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQ
Sbjct: 290 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 335
>gb|AFW66438.1| putative ubiquitin family protein, partial [Zea mays]
gi|413926515|gb|AFW66447.1| ubiquitin2, partial [Zea
mays]
Length = 349
Score = 92.0 bits (227), Expect = 4e-17
Identities = 49/69 (71%), Positives = 56/69 (81%)
Frame = +2
Query: 20 DSFHNVKVKIQEKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKE 199
D+ NVK KIQ KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKE
Sbjct: 173 DTIDNVKAKIQ-KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 231
Query: 200 GIPPYQQRL 226
GIPP QQRL
Sbjct: 232 GIPPDQQRL 240
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 259 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 316
Score = 67.4 bits (163), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +2
Query: 98 MQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
MQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 43
Score = 62.4 bits (150), Expect = 4e-08
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQ 190
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQ
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183
>dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana]
Length = 351
Score = 92.0 bits (227), Expect = 4e-17
Identities = 49/69 (71%), Positives = 56/69 (81%)
Frame = +2
Query: 20 DSFHNVKVKIQEKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKE 199
D+ NVK KIQ KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKE
Sbjct: 173 DTIDNVKAKIQ-KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 231
Query: 200 GIPPYQQRL 226
GIPP QQRL
Sbjct: 232 GIPPDQQRL 240
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 259 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 316
Score = 67.4 bits (163), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +2
Query: 98 MQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
MQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 43
Score = 62.4 bits (150), Expect = 4e-08
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQ 190
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQ
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 183
>prf||1908225A ubiquitin
Length = 305
Score = 84.3 bits (207), Expect = 9e-15
Identities = 49/99 (49%), Positives = 57/99 (57%), Gaps = 30/99 (30%)
Frame = +2
Query: 20 DSFHNVKVKIQEKEC------------------------------KLNVVLRLGGGMQIY 109
D+ NVK KIQ+KEC L++VLRL GGMQI+
Sbjct: 97 DTIENVKAKIQDKECIPPDQQRLIFAGKQLEDGRTLFDYNIQKESTLHLVLRLRGGMQIF 156
Query: 110 IKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KT TG+ TLEVE SDTI +VK KIQDKEGIPP QQRL
Sbjct: 157 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Score = 82.4 bits (202), Expect = 4e-14
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVE SDTI +VK KIQDKEGIPP QQRL
Sbjct: 214 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Score = 79.0 bits (193), Expect = 4e-13
Identities = 40/58 (68%), Positives = 47/58 (81%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVE SDTI +VK KIQDKE IPP QQRL
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKECIPPDQQRL 119
Score = 65.9 bits (159), Expect = 3e-09
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +2
Query: 98 MQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
MQI++KT TG+ TLEVE SDTI +VK KIQDKEGIPP QQRL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43
>gb|ADY49558.1| Polyubiquitin-C, partial [Ascaris suum]
Length = 148
Score = 84.3 bits (207), Expect = 9e-15
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +2
Query: 53 EKECKLNVVLRLGGGMQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
+KE L++VLRL GGMQI++KT TG+ TLEVESSDTI +VK KIQDKEGIPP QQRL
Sbjct: 62 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Score = 66.6 bits (161), Expect = 2e-09
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +2
Query: 98 MQIYIKTPTGRVFTLEVESSDTIYSVKVKIQDKEGIPPYQQRL 226
MQ+++KT TG+ TLEVE SDTI +VKVKIQDKEGIPP QQRL
Sbjct: 1 MQLFVKTLTGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRL 43