BLASTX nr result
ID: Atractylodes21_contig00014885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00014885
(282 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi... 139 2e-31
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera] 139 2e-31
ref|XP_002871739.1| pentatricopeptide repeat-containing protein ... 136 2e-30
ref|NP_197188.1| pentatricopeptide repeat-containing protein [Ar... 135 4e-30
ref|XP_002515835.1| pentatricopeptide repeat-containing protein,... 134 1e-29
>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 139 bits (351), Expect = 2e-31
Identities = 64/93 (68%), Positives = 78/93 (83%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
+LSGCA GTLL GKE HCHAIK ILN++ NDPGD+ MVIN+LIDMY+KCK+ AR +F
Sbjct: 373 LLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMF 432
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
D + P +R+VVTWTV+IGG +QHGEAN+ALELF
Sbjct: 433 DLIPPKDRSVVTWTVLIGGNAQHGEANEALELF 465
Score = 65.1 bits (157), Expect = 6e-09
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
VL CA VG +GK++H +A++ L ++ V N+++DMYAKC + A K+F
Sbjct: 237 VLPACASVGAWSRGKQVHGYALRSGLF-------EDVFVGNAVVDMYAKCGMMEEANKVF 289
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
+ + ++VV+W M+ GYSQ G +DAL LF
Sbjct: 290 ERM--KVKDVVSWNAMVTGYSQIGRFDDALGLF 320
Score = 61.6 bits (148), Expect = 6e-08
Identities = 34/92 (36%), Positives = 50/92 (54%)
Frame = +2
Query: 5 LSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIFD 184
L CA +G L G++IH + ++ N V N LIDMY+K D AR +FD
Sbjct: 486 LMACARLGALRFGRQIHAYVLR------NRFESAMLFVANCLIDMYSKSGDVDAARVVFD 539
Query: 185 SVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
++ RN V+WT ++ GY HG +AL++F
Sbjct: 540 NM--HQRNGVSWTSLMTGYGMHGRGEEALQIF 569
>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 139 bits (351), Expect = 2e-31
Identities = 64/93 (68%), Positives = 78/93 (83%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
+LSGCA GTLL GKE HCHAIK ILN++ NDPGD+ MVIN+LIDMY+KCK+ AR +F
Sbjct: 392 LLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMF 451
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
D + P +R+VVTWTV+IGG +QHGEAN+ALELF
Sbjct: 452 DLIPPKDRSVVTWTVLIGGNAQHGEANEALELF 484
Score = 65.1 bits (157), Expect = 6e-09
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
VL CA VG +GK++H +A++ L ++ V N+++DMYAKC + A K+F
Sbjct: 256 VLPACASVGAWSRGKQVHGYALRSGLF-------EDVFVGNAVVDMYAKCGMMEEANKVF 308
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
+ + ++VV+W M+ GYSQ G +DAL LF
Sbjct: 309 ERM--KVKDVVSWNAMVTGYSQIGRFDDALGLF 339
Score = 61.6 bits (148), Expect = 6e-08
Identities = 34/92 (36%), Positives = 50/92 (54%)
Frame = +2
Query: 5 LSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIFD 184
L CA +G L G++IH + ++ N V N LIDMY+K D AR +FD
Sbjct: 505 LMACARLGALRFGRQIHAYVLR------NRFESAMLFVANCLIDMYSKSGDVDAARVVFD 558
Query: 185 SVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
++ RN V+WT ++ GY HG +AL++F
Sbjct: 559 NM--HQRNGVSWTSLMTGYGMHGRGEEALQIF 588
>ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317576|gb|EFH47998.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 850
Score = 136 bits (342), Expect = 2e-30
Identities = 64/92 (69%), Positives = 74/92 (80%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
VLSGCA VG L+ GKEIHC+AIK +++ N GDE MVIN LIDMYAKCK D+AR +F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMF 430
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALEL 277
DS+ P R+VVTWTVMIGGYSQHG+AN ALEL
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462
Score = 62.4 bits (150), Expect = 4e-08
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 5 LSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDL--ARKI 178
L CA + L GK+IH +A++ N V N LIDMYAKC GD+ AR +
Sbjct: 484 LVACASLAALSIGKQIHAYALR------NQQNAVPLFVSNCLIDMYAKC--GDIGDARLV 535
Query: 179 FDSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
FD++ +N VTWT ++ GY HG +AL +F
Sbjct: 536 FDNM--MEKNEVTWTSLMTGYGMHGYGEEALGIF 567
Score = 57.0 bits (136), Expect = 2e-06
Identities = 36/93 (38%), Positives = 48/93 (51%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
VL CA VGT GK+ H A+ + N V N L+DMYAK D A +F
Sbjct: 235 VLPPCASVGTRSLGKQFHGFAVTSEMIQN-------MFVGNCLVDMYAKFGMMDEANTVF 287
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
++ ++VV+W M+ GYSQ G DA+ LF
Sbjct: 288 SNMPV--KDVVSWNAMVAGYSQIGRFEDAVRLF 318
>ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g16860 gi|9755687|emb|CAC01699.1| putative protein
[Arabidopsis thaliana] gi|332004967|gb|AED92350.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 850
Score = 135 bits (339), Expect = 4e-30
Identities = 64/92 (69%), Positives = 73/92 (79%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
VLSGCA VG L+ GKEIHC+AIK +++ N GDE MVIN LIDMYAKCK D AR +F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF 430
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALEL 277
DS+ P R+VVTWTVMIGGYSQHG+AN ALEL
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462
Score = 67.0 bits (162), Expect = 1e-09
Identities = 38/93 (40%), Positives = 52/93 (55%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
VL CA +GT GK++HC A+ + N V N L+DMYAKC D A +F
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQN-------MFVGNCLVDMYAKCGMMDEANTVF 287
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
++ S ++VV+W M+ GYSQ G DA+ LF
Sbjct: 288 SNM--SVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Score = 62.8 bits (151), Expect = 3e-08
Identities = 36/92 (39%), Positives = 50/92 (54%)
Frame = +2
Query: 5 LSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIFD 184
L CA + L GK+IH +A++ N V N LIDMYAKC + AR +FD
Sbjct: 484 LVACASLAALRIGKQIHAYALR------NQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 185 SVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
++ +N VTWT ++ GY HG +AL +F
Sbjct: 538 NM--MAKNEVTWTSLMTGYGMHGYGEEALGIF 567
>ref|XP_002515835.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544990|gb|EEF46504.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 655
Score = 134 bits (336), Expect = 1e-29
Identities = 60/93 (64%), Positives = 76/93 (81%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
+LSGCA VG LL GKE HC++IK +LN + +DP DE +V+N++IDMY KCK ++ R IF
Sbjct: 388 LLSGCASVGALLHGKETHCYSIKCVLNFDRSDPRDELLVVNAIIDMYTKCKDINVGRAIF 447
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
+S+ P +RNVVTWT MIGGY+QHGEANDALELF
Sbjct: 448 NSIPPKDRNVVTWTAMIGGYAQHGEANDALELF 480
Score = 70.1 bits (170), Expect = 2e-10
Identities = 40/93 (43%), Positives = 56/93 (60%)
Frame = +2
Query: 2 VLSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIF 181
VL CA +G L GK++H AI+ L ++ V NSL+DMYAKC +A K+F
Sbjct: 252 VLPACASMGDWLCGKQVHGFAIRYGLF-------EDVFVANSLVDMYAKCGLMCIANKVF 304
Query: 182 DSVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
D + +++VV+W M+ GYSQ G+ DAL LF
Sbjct: 305 DRM--QHKDVVSWNAMVTGYSQIGKFEDALGLF 335
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/92 (34%), Positives = 50/92 (54%)
Frame = +2
Query: 5 LSGCACVGTLLQGKEIHCHAIKQILNINNNDPGDEQMVINSLIDMYAKCKAGDLARKIFD 184
L CA + L G++IH ++ + D V N LIDMY+K D AR +FD
Sbjct: 502 LMACARLAALRFGRQIHAFVLRDQYDC------DVLYVANCLIDMYSKSGDMDAARLVFD 555
Query: 185 SVGPSNRNVVTWTVMIGGYSQHGEANDALELF 280
++ +RN V+WT ++ GY HG +A+++F
Sbjct: 556 NM--KHRNTVSWTSLMTGYGMHGHGEEAIKVF 585