BLASTX nr result

ID: Atractylodes21_contig00014884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014884
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl...   107   1e-40
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl...   106   1e-40
emb|CBI33662.3| unnamed protein product [Vitis vinifera]              106   1e-40
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin...   104   1e-39
sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, ch...   101   1e-39

>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
           sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
           ribosomal protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 192

 Score =  107 bits (266), Expect(2) = 1e-40
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = -3

Query: 522 LGVVVKPMEKPRLVLKFIWMEKNIGLALDQVIPGYGTIPLSPYYFWPRKDA 370
           LGVVVKPMEKPRLVLKFIWMEKNIG+ALDQ+IPG+GTIPLSPYYFWPRKDA
Sbjct: 101 LGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDA 151



 Score = 85.1 bits (209), Expect(2) = 1e-40
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = -1

Query: 284 RKDAWEELKIMLEGKPWISQKQVIILLNQATDIINLWQQSGGDL 153
           RKDAWEELK++LE KPWISQKQ+IILLNQATDIINLWQQ GG+L
Sbjct: 148 RKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNL 191


>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488272|ref|XP_003633730.1|
           PREDICTED: 30S ribosomal protein 3, chloroplastic-like
           isoform 2 [Vitis vinifera]
          Length = 176

 Score =  106 bits (264), Expect(2) = 1e-40
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = -3

Query: 522 LGVVVKPMEKPRLVLKFIWMEKNIGLALDQVIPGYGTIPLSPYYFWPRKDA 370
           LGVVVKPMEKPRLVLKFIWMEKNIG+ALDQ IPG+GTIPLSPYYFWPRKDA
Sbjct: 85  LGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDA 135



 Score = 85.9 bits (211), Expect(2) = 1e-40
 Identities = 38/44 (86%), Positives = 43/44 (97%)
 Frame = -1

Query: 284 RKDAWEELKIMLEGKPWISQKQVIILLNQATDIINLWQQSGGDL 153
           RKDAWEE+K++LE KPWISQKQ+IILLNQATDIINLWQQSGG+L
Sbjct: 132 RKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 175


>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  106 bits (264), Expect(2) = 1e-40
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = -3

Query: 522 LGVVVKPMEKPRLVLKFIWMEKNIGLALDQVIPGYGTIPLSPYYFWPRKDA 370
           LGVVVKPMEKPRLVLKFIWMEKNIG+ALDQ IPG+GTIPLSPYYFWPRKDA
Sbjct: 84  LGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDA 134



 Score = 85.9 bits (211), Expect(2) = 1e-40
 Identities = 38/44 (86%), Positives = 43/44 (97%)
 Frame = -1

Query: 284 RKDAWEELKIMLEGKPWISQKQVIILLNQATDIINLWQQSGGDL 153
           RKDAWEE+K++LE KPWISQKQ+IILLNQATDIINLWQQSGG+L
Sbjct: 131 RKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174


>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
           gi|255628049|gb|ACU14369.1| unknown [Glycine max]
          Length = 158

 Score =  104 bits (259), Expect(2) = 1e-39
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = -3

Query: 522 LGVVVKPMEKPRLVLKFIWMEKNIGLALDQVIPGYGTIPLSPYYFWPRKDA 370
           LGVVVKP EKPRLVLKFIWMEKNIG+ALDQ++PG+GTIPLSPYYFWPRKDA
Sbjct: 67  LGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDA 117



 Score = 84.3 bits (207), Expect(2) = 1e-39
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = -1

Query: 284 RKDAWEELKIMLEGKPWISQKQVIILLNQATDIINLWQQSGGDL 153
           RKDAWEELK +LE KPWISQKQ+IILLNQATDIINLWQQSGG+L
Sbjct: 114 RKDAWEELKELLENKPWISQKQMIILLNQATDIINLWQQSGGNL 157


>sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 3;
           Short=PSRP-3; Flags: Precursor
           gi|7578871|gb|AAF64163.1|AF239218_1 plastid-specific
           ribosomal protein 3 precursor [Spinacia oleracea]
          Length = 179

 Score =  101 bits (252), Expect(2) = 1e-39
 Identities = 45/51 (88%), Positives = 49/51 (96%)
 Frame = -3

Query: 522 LGVVVKPMEKPRLVLKFIWMEKNIGLALDQVIPGYGTIPLSPYYFWPRKDA 370
           L V+VKPM+KPRLVLKFIWMEKNIGLALDQ IPG+GT+PLSPYYFWPRKDA
Sbjct: 87  LKVLVKPMDKPRLVLKFIWMEKNIGLALDQTIPGHGTVPLSPYYFWPRKDA 137



 Score = 86.7 bits (213), Expect(2) = 1e-39
 Identities = 39/44 (88%), Positives = 43/44 (97%)
 Frame = -1

Query: 284 RKDAWEELKIMLEGKPWISQKQVIILLNQATDIINLWQQSGGDL 153
           RKDAWEELK++LE KPWISQKQ+IILLNQATDIINLWQQSGG+L
Sbjct: 134 RKDAWEELKVLLENKPWISQKQMIILLNQATDIINLWQQSGGNL 177


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