BLASTX nr result

ID: Atractylodes21_contig00014832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014832
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      72   6e-11
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    71   8e-11
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    71   8e-11
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          71   1e-10
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]            71   1e-10

>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -2

Query: 227 AHADNEKMETRVVKCVFLGYKPGVKGFKLWCPELRNVIISTNAAF 93
           AH DN K+E RV+KC+FLGY  GVKG+KLWCPE + V+IS N  F
Sbjct: 577 AHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVF 621


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -2

Query: 227 AHADNEKMETRVVKCVFLGYKPGVKGFKLWCPELRNVIISTNAAF 93
           AH DN K+E R +KC+FLGY  GVKG+KLWCPE + V+IS N  F
Sbjct: 629 AHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVF 673


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -2

Query: 227 AHADNEKMETRVVKCVFLGYKPGVKGFKLWCPELRNVIISTNAAF 93
           AH DN K+E R +KC+FLGY  GVKG+KLWCPE + V+IS N  F
Sbjct: 666 AHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVF 710


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -2

Query: 227 AHADNEKMETRVVKCVFLGYKPGVKGFKLWCPELRNVIISTNAAF 93
           AH DN K+E R +KC+FLGY  GVKG+KLWCPE + V+IS N  F
Sbjct: 496 AHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVISRNVVF 540


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -2

Query: 227 AHADNEKMETRVVKCVFLGYKPGVKGFKLWCPELRNVIISTNAAF 93
           AH DN K+E R +KC+FLGY  GVKG+KLWCPE + V+IS N  F
Sbjct: 496 AHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVISRNVVF 540


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