BLASTX nr result

ID: Atractylodes21_contig00014781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014781
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADX86900.1| auxin response factor [Helianthus annuus]              215   6e-54
ref|XP_002515369.1| DNA binding protein, putative [Ricinus commu...    99   5e-19
ref|XP_002515368.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|NP_194892.1| B3 domain-containing protein REM5 [Arabidopsis ...    87   2e-15
ref|NP_194896.2| B3 domain-containing protein REM8 [Arabidopsis ...    82   6e-14

>gb|ADX86900.1| auxin response factor [Helianthus annuus]
          Length = 508

 Score =  215 bits (547), Expect = 6e-54
 Identities = 120/212 (56%), Positives = 138/212 (65%), Gaps = 10/212 (4%)
 Frame = -1

Query: 607 MEDPQTHFFKFIPPSFKLNISIPTSFWTNLNGGRCSKAILRRGGRQWPVAVSGGGVFGDG 428
           M +P  HFFKFIPP  K N+SIP SF T L+G R  KA LRRG   W V +  GGVFGDG
Sbjct: 1   MANPPNHFFKFIPPDSKFNLSIPKSFLTKLDGWRGKKATLRRGCHTWAVHIGDGGVFGDG 60

Query: 427 WRKFVRENGVKEFDFIVFKHQGKMVFDFLVFDQSTCERPYPNLLHKMNNAEEPLTESDSI 248
           WRKFV ENGV+EFD IVFKHQG MVFDF VFD STCER Y +L    +N E  L ESDS+
Sbjct: 61  WRKFVVENGVQEFDIIVFKHQGNMVFDFFVFDPSTCERQYSDL---PDNVEVSLPESDSL 117

Query: 247 LT-HRSEKLKKRKRNVDFG---------LDDARCFVLKMTPYYIKSSKLNVPKKFAMSNR 98
            T  RS  LKKRKR  D+          LDD  CFV  MTPY I SS+L VP +FA SN 
Sbjct: 118 HTLERSRMLKKRKR-TDYSSQGKDKCIQLDDDSCFVTIMTPYNITSSRLIVPMEFARSNG 176

Query: 97  WITERIQTEVIIKDERRRTWPATLTDYKTQIR 2
             T+R+ T+V++ DE +RT PA L     Q+R
Sbjct: 177 LTTKRMHTQVVLVDEAKRTCPAKLHIMTRQVR 208


>ref|XP_002515369.1| DNA binding protein, putative [Ricinus communis]
           gi|223545313|gb|EEF46818.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 368

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 20/214 (9%)
 Frame = -1

Query: 607 MEDPQTHFFKFIPPSFKLNISIPTSFWTNLNGGRCSKAILRR-GGRQWPVAVSGGGVFGD 431
           M   + HFF+ + P F+   SIP SF+ +L G R   A+LR   G+ W V ++G   F D
Sbjct: 1   MSSSKPHFFQPVLPGFEDEPSIPVSFFKHLKGNRREIAVLRSTAGKLWHVKINGRR-FED 59

Query: 430 GWRKFVRENGVKEFDFIVFKHQGKMVFDFLVFDQSTCERPYP--NLLHKMNNAEEPLTES 257
           GW+ F + + +   DF+VF+H+G MVF  +VFD S CER Y   N+  +M  +EE   E 
Sbjct: 60  GWKDFAKYHDLHIGDFLVFRHEGDMVFYVMVFDPSACEREYTSFNVKEEMETSEE---EK 116

Query: 256 DSILTHRSEKLKKRKRNV-------DFGLDDARCFVLKMTPY----------YIKSSKLN 128
           +   T    K  K K+ +       +  + +   F + MT Y          +I   K N
Sbjct: 117 EPAKTSDLRKFTKNKQIMISVEGKGNPPVFENPHFAVNMTSYTASHPRKPLKFIYLFKQN 176

Query: 127 VPKKFAMSNRWITERIQTEVIIKDERRRTWPATL 26
           +PKKFA +N         ++++ D+  R+W A L
Sbjct: 177 IPKKFAEANGLYNR--YCKIVLVDQESRSWLADL 208


>ref|XP_002515368.1| conserved hypothetical protein [Ricinus communis]
           gi|223545312|gb|EEF46817.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 559

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
 Frame = -1

Query: 589 HFFKFIPPSFKLNISIPTSFWTNLNGGRCSKAILRR-GGRQWPVAVSGGGVFGDGWRKFV 413
           HFFK + P F+    IP SF+  L G  C  A+L    G+ WP+ ++G   F DGW++F 
Sbjct: 8   HFFKPLLPGFEHEFLIPVSFFKYLKGQECKNAVLSSCPGKLWPIKINGRR-FEDGWKEFT 66

Query: 412 RENGVKEFDFIVFKHQGKMVFDFLVFDQSTCERPYPNLLHKMNNAEEPLTESDSILTHRS 233
           R + +   DF+VF+H+G M+F   VFD STC R YP    K           + I  H  
Sbjct: 67  RHHDLHVGDFLVFRHEGDMLFHVKVFDSSTCARDYPFFSIK----------EEKIEIHEE 116

Query: 232 EKLKKRKRN---VDFGLDDARCFVLKMTPY---YIKSSKLNVPKKFAMSNRWITERIQTE 71
           E  +K   N   +     +   F+   T +    I   K ++   FA  +  I  R   +
Sbjct: 117 EPAQKSSPNWSVISTYALNMYGFIFICTHWLDSLICIFKQHMSTDFARLHGLINRR--CK 174

Query: 70  VIIKDERRRTWPATL 26
           +I+ DE  R+WP  L
Sbjct: 175 MIVMDEEGRSWPTML 189


>ref|NP_194892.1| B3 domain-containing protein REM5 [Arabidopsis thaliana]
           gi|75336924|sp|Q9SB80.1|REM5_ARATH RecName: Full=B3
           domain-containing protein REM5; AltName: Full=Auxin
           response factor 22; AltName: Full=Protein REPRODUCTIVE
           MERISTEM 5 gi|3849834|emb|CAA19759.1| putative protein
           [Arabidopsis thaliana] gi|7270067|emb|CAB79882.1|
           putative protein [Arabidopsis thaliana]
           gi|20152526|emb|CAD29642.1| putative auxin response
           factor 22 [Arabidopsis thaliana]
           gi|23296509|gb|AAN13074.1| unknown protein [Arabidopsis
           thaliana] gi|225898843|dbj|BAH30552.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332660540|gb|AEE85940.1| B3 domain-containing protein
           REM5 [Arabidopsis thaliana]
          Length = 352

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 7/211 (3%)
 Frame = -1

Query: 622 RN*TAMEDPQTHFFKFIPPSFKLNISIPTSFWT-NLNGGRCSKAILRRG---GRQWPVAV 455
           +N T       HFF+ I P FK +I IP  F++ ++ G      +  R     R W V +
Sbjct: 2   KNPTLFAPKSPHFFQPILPGFKSHIKIPVKFFSKHIEGKHEGNTVYLRSYPSRRTWKVKM 61

Query: 454 SGGGVFGDGWRKFVRENGVKEFDFIVFKHQGKMVFDFLVFDQSTCERPY-PNLLHKMNNA 278
            G  +  +GW++FV  + ++  DF+VFKH+G M+F       S CE  Y P+  H  N  
Sbjct: 62  EGHKLT-EGWKEFVEAHDLRVGDFVVFKHKGDMLFHVTAIGPSCCEVQYAPSRSHDRNEE 120

Query: 277 EEPLTESDSILTHRSEKL--KKRKRNVDFGLDDARCFVLKMTPYYIKSSKLNVPKKFAMS 104
            + + ES      R+EK+  +  K   D    D  CF   +T   +    + +P+ FA  
Sbjct: 121 SDEIGESS-----RNEKIIEENVKTEPDQFSPDLTCFSQSVTASNLTRDLVGIPRDFA-- 173

Query: 103 NRWITERIQTEVIIKDERRRTWPATLTDYKT 11
            R+     + E+++ DE   TW + +  YK+
Sbjct: 174 KRYGLNIGRHEIVLMDEEGNTWESEVKSYKS 204


>ref|NP_194896.2| B3 domain-containing protein REM8 [Arabidopsis thaliana]
           gi|75329151|sp|Q8H2D1.1|REM8_ARATH RecName: Full=B3
           domain-containing protein REM8; AltName: Full=Auxin
           response factor 24; AltName: Full=Protein REPRODUCTIVE
           MERISTEM 8 gi|24817267|emb|CAD56214.1| putative auxin
           response factor 24 [Arabidopsis thaliana]
           gi|332660544|gb|AEE85944.1| B3 domain-containing protein
           REM8 [Arabidopsis thaliana]
          Length = 462

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
 Frame = -1

Query: 619 N*TAMEDPQTHFFKFIPPSFKLNISIPTSFWT-NLNGGRCSKAILRRGG---RQWPVAVS 452
           N + +     HFFK + P F+ N++IP  F++ ++ G    + +  R     R W V + 
Sbjct: 3   NASQLSPTNKHFFKPLLPGFQRNLNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKMD 62

Query: 451 GGGVFGDGWRKFVRENGVKEFDFIVFKHQGKMVFDFLVFDQSTCERPYPNLLHKMNNAEE 272
           G  +  +GW++FV  + ++  DF+VF+H+G MVF       S CE  YP  +     + E
Sbjct: 63  GNRLT-EGWKEFVEAHDLRIRDFVVFRHEGDMVFHVTALGPSCCEIQYPQSI-----SHE 116

Query: 271 PLTESDSILTHRSEKLKKRKRNVDFGLDDARCFVLKMTPYYIKSSKLNVPKKFAMSNRWI 92
              ES  +     E  +  ++  D    D  CF   +T   I +  + +P+ FA  N   
Sbjct: 117 EGEESGEVEISEREVEENLQKEYDQSSADLNCFSQSVTHSNISNDLVTLPRDFAKRNG-- 174

Query: 91  TERIQTEVIIKDERRRTW 38
            ++   E+++ +E  ++W
Sbjct: 175 LDKGMHEIVLMNEEGKSW 192


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