BLASTX nr result

ID: Atractylodes21_contig00014706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014706
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD03156.1| resistance protein candidate RGC2B [Lactuca sativa]     89   5e-16
gb|AAP42976.1| RGC2 resistance protein 5A [Lactuca serriola]           87   2e-15
gb|AAP42975.1| RGC2 resistance protein 5A [Lactuca serriola]           86   4e-15
gb|AAD03673.1| resistance protein candidate RGC20 [Lactuca sativa]     84   1e-14
gb|AAQ72577.1| resistance protein RGC2 [Lactuca sativa]                83   3e-14

>gb|AAD03156.1| resistance protein candidate RGC2B [Lactuca sativa]
          Length = 1810

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = -2

Query: 256  SLKLRDLDSLKGFYLGREAFQWPSLDTLEIEECPEITVFTNGQSTAPKLKAIKTSFG-LC 80
            SL LR+L  LKGF LG+E F +P LDTL IEECP IT FT G S  P+LK I+T FG  C
Sbjct: 1728 SLILRELPCLKGFSLGKEDFSFPLLDTLRIEECPAITTFTKGNSATPQLKEIETHFGSFC 1787

Query: 79   DVTEEDVNSFIRTKKQE 29
               E+D+NS I+ K+QE
Sbjct: 1788 AAGEKDINSLIKIKQQE 1804



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/78 (44%), Positives = 49/78 (62%)
 Frame = -2

Query: 256  SLKLRDLDSLKGFYLGREAFQWPSLDTLEIEECPEITVFTNGQSTAPKLKAIKTSFGLCD 77
            S+ L +L  L GF+LG   F+ PSLD L+I++CP++ VFT G STAP+LK I T  G   
Sbjct: 1456 SIVLVNLPELVGFFLGMNEFRLPSLDKLKIKKCPKMMVFTAGGSTAPQLKYIHTRLGKHT 1515

Query: 76   VTEEDVNSFIRTKKQEEY 23
            + +E   +F +T  Q  Y
Sbjct: 1516 LDQESGLNFHQTSFQSLY 1533


>gb|AAP42976.1| RGC2 resistance protein 5A [Lactuca serriola]
          Length = 235

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = -2

Query: 256 SLKLRDLDSLKGFYLGREAFQWPSLDTLEIEECPEITVFTNGQSTAPKLKAIKTSFG-LC 80
           SL LR+L  LKGF LG+E F +P LDTL IEECP IT FT G S  P+LK I+T FG  C
Sbjct: 160 SLILRELPCLKGFSLGKEDFSFPLLDTLRIEECPAITTFTKGNSATPQLKEIETHFGSFC 219

Query: 79  DVTEEDVNSFIRTKKQ 32
              E+D+NS I+ K+Q
Sbjct: 220 AAGEKDINSLIKIKQQ 235


>gb|AAP42975.1| RGC2 resistance protein 5A [Lactuca serriola]
          Length = 235

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 256 SLKLRDLDSLKGFYLGREAFQWPSLDTLEIEECPEITVFTNGQSTAPKLKAIKTSFG-LC 80
           SL LR+L  LKGF LG+E F +P LDTL IEECP IT FT G S  P+LK I+T FG  C
Sbjct: 160 SLILRELPCLKGFSLGKEDFSFPLLDTLRIEECPAITTFTKGNSATPQLKEIETHFGSFC 219

Query: 79  DVTEEDVNSFIRTKKQ 32
              E+D+NS I  K+Q
Sbjct: 220 AAGEKDINSLIMIKQQ 235


>gb|AAD03673.1| resistance protein candidate RGC20 [Lactuca sativa]
          Length = 1758

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/75 (57%), Positives = 51/75 (68%)
 Frame = -2

Query: 256  SLKLRDLDSLKGFYLGREAFQWPSLDTLEIEECPEITVFTNGQSTAPKLKAIKTSFGLCD 77
            SL L  L  LKGF LG+E F +P LDTLEI  CPEIT FT G S  P+LK I+TSFG   
Sbjct: 1684 SLTLGWLPCLKGFSLGKEDFSFPLLDTLEINNCPEITTFTKGNSATPRLKEIETSFGSFF 1743

Query: 76   VTEEDVNSFIRTKKQ 32
            V   D+NSFI+ K++
Sbjct: 1744 VAGTDINSFIKIKQK 1758



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = -2

Query: 256  SLKLRDLDSLKGFYLGREAFQWPSLDTLEIEECPEITVFTNGQSTAPKLKAIKTSFGLCD 77
            S+KL +L  L+GF+LG   FQWPSL  + I+ CP++TVF  G STAP LK I T+ G   
Sbjct: 1430 SIKLFNLPELEGFFLGMNEFQWPSLAYVVIKNCPQMTVFAPGGSTAPMLKHIHTTLGKHS 1489

Query: 76   VTEEDVN 56
            + E  +N
Sbjct: 1490 LGESGLN 1496


>gb|AAQ72577.1| resistance protein RGC2 [Lactuca sativa]
          Length = 747

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = -2

Query: 256 SLKLRDLDSLKGFYLGREAFQWPSLDTLEIEECPEITVFTNGQSTAPKLKAIKTSFGLCD 77
           SL L+ L  LKGF LG+E F +P LDTLEI +CP IT FT G ST P+LK I+T+FG   
Sbjct: 663 SLILKHLPCLKGFSLGKEDFSFPLLDTLEIYKCPAITTFTKGNSTTPQLKEIETNFGFFY 722

Query: 76  VT-EEDVNSFIRTKKQE 29
              E+D+NS I+ K+QE
Sbjct: 723 AAGEKDINSLIKIKQQE 739



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/78 (41%), Positives = 48/78 (61%)
 Frame = -2

Query: 256 SLKLRDLDSLKGFYLGREAFQWPSLDTLEIEECPEITVFTNGQSTAPKLKAIKTSFGLCD 77
           S++L +L  L+GF+LG   F+ P LD + I++CP++ VF  G STAP+LK I T  G   
Sbjct: 389 SIELENLRRLEGFFLGMNEFRLPLLDNVTIKKCPKMMVFAAGGSTAPQLKYIHTELGRHA 448

Query: 76  VTEEDVNSFIRTKKQEEY 23
           + +E   +F +T  Q  Y
Sbjct: 449 LDQESGLNFHQTSFQSLY 466


Top