BLASTX nr result

ID: Atractylodes21_contig00014683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014683
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD03671.1| resistance protein candidate RGC2J [Lactuca sativa]     52   4e-07
gb|AAQ72574.1| resistance protein RGC2 [Lactuca sativa]                50   2e-06

>gb|AAD03671.1| resistance protein candidate RGC2J [Lactuca sativa]
          Length = 1847

 Score = 52.4 bits (124), Expect(2) = 4e-07
 Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
 Frame = -1

Query: 228 KAKDGCE*KENVQLYYQVAIGEKADPIVISQAVVEFLSIDLKDTT---RSSKLHKRFASN 58
           K K+  E K+   +  QV IGEK +PI I QAV ++LSI+LK+ T   R+ KL KRF ++
Sbjct: 195 KLKEVVEQKKTCNIIVQVVIGEKTNPIAIQQAVADYLSIELKENTKEARADKLRKRFEAD 254



 Score = 26.2 bits (56), Expect(2) = 4e-07
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 67  RFEYDGGKKMYLIIFD 20
           RFE DGGK  +L+I D
Sbjct: 250 RFEADGGKNKFLVILD 265


>gb|AAQ72574.1| resistance protein RGC2 [Lactuca sativa]
          Length = 892

 Score = 50.1 bits (118), Expect(2) = 2e-06
 Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
 Frame = -1

Query: 228 KAKDGCE*KENVQLYYQVAIGEKADPIVISQAVVEFLSIDLKDTT---RSSKLHKRFASN 58
           K K+    K++  +  QV IGEK +PI I QAV ++LSI+LK+ T   R+ KL KRF ++
Sbjct: 18  KLKEVVGQKKSFNIIIQVVIGEKTNPIAIQQAVADYLSIELKENTKEARADKLRKRFEAD 77



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 67  RFEYDGGKKMYLIIFD 20
           RFE DGGK  +L+I D
Sbjct: 73  RFEADGGKNKFLVILD 88


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