BLASTX nr result

ID: Atractylodes21_contig00014537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014537
         (1404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C,...   312   e-100
ref|XP_003594254.1| RNA-binding protein, putative [Medicago trun...   310   2e-99
ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C,...   320   3e-97
ref|XP_002308799.1| predicted protein [Populus trichocarpa] gi|2...   306   3e-94
ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arab...   320   6e-94

>ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223532357|gb|EEF34155.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 456

 Score =  312 bits (800), Expect(2) = e-100
 Identities = 153/197 (77%), Positives = 172/197 (87%), Gaps = 3/197 (1%)
 Frame = +3

Query: 3   IGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVAERVVKEKHI 182
           IGGISWDTNE+RLR+YFQ FGEV+EAVIMKDR TGRARGFGF+VF+DP VAERVV EKH+
Sbjct: 10  IGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVMEKHL 69

Query: 183 IDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPTRTKKIFVGGLASTVTENEFKNYFEQ 362
           IDGR VEAKKAVPR+DQ   +  + SS+ GSP P RTKKIFVGGLASTVTE++FK YF+Q
Sbjct: 70  IDGRNVEAKKAVPREDQNILNRNSSSSIHGSPSPARTKKIFVGGLASTVTESDFKKYFDQ 129

Query: 363 FGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVKRAVPKDSSP 542
           FGT TDVVVMYDHNTQRPRGFGFITYDSEE+V+KVL KTFHELNGKMVEVKRAVPK+ SP
Sbjct: 130 FGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVKRAVPKELSP 189

Query: 543 GANRSP---YSYGLSRV 584
           G  R+    Y+YG +RV
Sbjct: 190 GPTRTQLNGYNYGPNRV 206



 Score = 80.5 bits (197), Expect(2) = e-100
 Identities = 60/176 (34%), Positives = 80/176 (45%), Gaps = 27/176 (15%)
 Frame = +2

Query: 677  PATVGRTGYS----SFNIGPNSDS--VXXXXXXXXXXXXXXXRPLNPMYTATPNRYAXXX 838
            PATVGR+ +S     F +G N +                     L+P Y    +RY    
Sbjct: 235  PATVGRSNFSPFGPGFGMGLNYEQGLSPSYGGNSNLSSNLGYGRLSPSYNGNSSRY-DSP 293

Query: 839  XXXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQG------NNFGSFGAIW- 997
                     N+SVLNS    +WGNG  N+++N+ NS+SFL  G       +FGS GA+W 
Sbjct: 294  IGYNGGNVGNSSVLNSPARTLWGNGTINHSSNSTNSSSFLGSGTGNPGIGSFGSIGALWG 353

Query: 998  ANPNSSNGVNAIGYGRKSGSSIAA------------GSYDD--GGGSFYADSTWRS 1123
            ++ +S  G   IGYGR SG+S+A             G Y D     S Y DS WRS
Sbjct: 354  SSASSGQGGGGIGYGRNSGTSVAPVSSHTASNDGYNGPYGDIYENISLYGDSAWRS 409



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 32/90 (35%), Positives = 54/90 (60%)
 Frame = +3

Query: 297 KIFVGGLASTVTENEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLK 476
           K+F+GG++    E+  + YF+ FG   + V+M D  T R RGFGF+ +      E+V+++
Sbjct: 7   KLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66

Query: 477 TFHELNGKMVEVKRAVPKDSSPGANRSPYS 566
             H ++G+ VE K+AVP++     NR+  S
Sbjct: 67  K-HLIDGRNVEAKKAVPREDQNILNRNSSS 95


>ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
           gi|355483302|gb|AES64505.1| RNA-binding protein,
           putative [Medicago truncatula]
          Length = 522

 Score =  310 bits (793), Expect(2) = 2e-99
 Identities = 159/200 (79%), Positives = 174/200 (87%), Gaps = 6/200 (3%)
 Frame = +3

Query: 3   IGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVAERVVKEKHI 182
           IGGISWDTNE+RLR YFQ FG+V+EAVIMKDRTTGRARGFGF+VF+DP+VAERVV EKH+
Sbjct: 49  IGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVMEKHV 108

Query: 183 IDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPT--RTKKIFVGGLASTVTENEFKNYF 356
           IDGR VEAKKAVPRDDQ   +  N SS  GSP PT  RTKKIFVGGLASTVTE++FKNYF
Sbjct: 109 IDGRTVEAKKAVPRDDQNVFTRSNSSS-HGSPAPTPIRTKKIFVGGLASTVTESDFKNYF 167

Query: 357 EQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVKRAVPKDS 536
           +QFGT TDVVVMYDHNTQRPRGFGFITYDSEE+VEKVL KTFHELNGKMVEVKRAVPKD 
Sbjct: 168 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKDL 227

Query: 537 SPGANRSP---YSYG-LSRV 584
           SP  +R     +SYG +SRV
Sbjct: 228 SPSPSRGQLGGFSYGTMSRV 247



 Score = 80.9 bits (198), Expect(2) = 2e-99
 Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 49/197 (24%)
 Frame = +2

Query: 677  PATVGRTGYS----SFNIGPNSDS-VXXXXXXXXXXXXXXXRPLNPMYTATPNRYAXXXX 841
            PA VGR+GYS    S+  G N +  +               R L+  Y+A+P+RY     
Sbjct: 276  PANVGRSGYSLFSPSYGTGLNFEPPLNQNENENFTSNFIMGRALSSPYSASPSRYNNAMA 335

Query: 842  XXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQGN------NFGSFGAIWA- 1000
                    N+S ++STN ++WGNGN NY NN  +S +FL  G+      +FG+ G++W+ 
Sbjct: 336  YAAGSNVGNSSAISSTNQSLWGNGNLNYANNPASSDAFLGYGSENSSIGSFGNIGSLWST 395

Query: 1001 ---------------NPNSSN--------GVNAIGYGRKSGSSIAA--------GSYDDG 1087
                             +S N        G  A+GYG+ S S++ +        GSY + 
Sbjct: 396  SVGAANQAGTIGSGYGKSSLNYRLGDVILGSKAVGYGKNSESNVESDSSYAFSNGSYGEA 455

Query: 1088 ------GGSFYADSTWR 1120
                   G FY D TWR
Sbjct: 456  YKSTFEAGPFYQDHTWR 472



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 32/87 (36%), Positives = 52/87 (59%)
 Frame = +3

Query: 297 KIFVGGLASTVTENEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLK 476
           K+F+GG++    E+  + YF+ FG   + V+M D  T R RGFGF+ +      E+V+++
Sbjct: 46  KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 105

Query: 477 TFHELNGKMVEVKRAVPKDSSPGANRS 557
             H ++G+ VE K+AVP+D      RS
Sbjct: 106 K-HVIDGRTVEAKKAVPRDDQNVFTRS 131


>ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223528341|gb|EEF30383.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 484

 Score =  320 bits (821), Expect(2) = 3e-97
 Identities = 156/197 (79%), Positives = 175/197 (88%), Gaps = 3/197 (1%)
 Frame = +3

Query: 3   IGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVAERVVKEKHI 182
           IGGISWDTNEERL++YF +FGEV+EAVIMKDRTTGRARGFGF+VF+D  VAERV+ EKH 
Sbjct: 10  IGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIMEKHN 69

Query: 183 IDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPTRTKKIFVGGLASTVTENEFKNYFEQ 362
           IDGR VEAKKAVPRDDQ   +   GSS+ GSPGP RT+KIFVGGLASTVTE +F+ YFEQ
Sbjct: 70  IDGRMVEAKKAVPRDDQNILNRSTGSSIHGSPGPGRTRKIFVGGLASTVTETDFRKYFEQ 129

Query: 363 FGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVKRAVPKDSSP 542
           +GT TDVVVMYDHNTQRPRGFGFITYDSEE+V+KVL+KTFHELNGKMVEVKRAVPK+ SP
Sbjct: 130 YGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPKELSP 189

Query: 543 GANRSP---YSYGLSRV 584
           G +RSP   Y+YGLSRV
Sbjct: 190 GPSRSPLGGYNYGLSRV 206



 Score = 62.8 bits (151), Expect(2) = 3e-97
 Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 50/199 (25%)
 Frame = +2

Query: 677  PATVGRTGY----SSFNIGPNSD---SVXXXXXXXXXXXXXXXRPLNPMYTATPNRYAXX 835
            P   GR+G+    S + +G N +   S                R ++P Y    NR+A  
Sbjct: 235  PVAGGRSGFPPFGSGYGMGMNFEPAFSPSYGGNANFSSNLSYGRGMSPYYIGNTNRFANP 294

Query: 836  XXXXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQ------GNNFGSFGAIW 997
                      N+S  +S   N+WGNG  NY +++ +S +++        GNNFG+    W
Sbjct: 295  TGYDGGNGG-NSSFFSSVTRNLWGNGGLNYNSSSASSNTYMGSGSGSIGGNNFGNSAVNW 353

Query: 998  AN---------PNSSN---------GVNAI-----GYGRKSGSSIAA--------GSYDD 1084
             +          N+SN         G N+      GYGR S +++A         GS+D 
Sbjct: 354  GSSTLAAHGGGSNASNNNLNFGYGGGENSFSLGTGGYGRNSVNNLATTSSYAASNGSFDG 413

Query: 1085 ------GGGSFYADSTWRS 1123
                  GGGS Y D TWRS
Sbjct: 414  TFGDLYGGGSDYGDPTWRS 432



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 35/87 (40%), Positives = 52/87 (59%)
 Frame = +3

Query: 297 KIFVGGLASTVTENEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLK 476
           K+F+GG++    E   K YF  FG   + V+M D  T R RGFGF+ +      E+V+++
Sbjct: 7   KLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME 66

Query: 477 TFHELNGKMVEVKRAVPKDSSPGANRS 557
             H ++G+MVE K+AVP+D     NRS
Sbjct: 67  K-HNIDGRMVEAKKAVPRDDQNILNRS 92


>ref|XP_002308799.1| predicted protein [Populus trichocarpa] gi|222854775|gb|EEE92322.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  306 bits (785), Expect(2) = 3e-94
 Identities = 152/197 (77%), Positives = 172/197 (87%), Gaps = 3/197 (1%)
 Frame = +3

Query: 3   IGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVAERVVKEKHI 182
           IGGISWDTNE+RL++YF+ FGEV+EAVIMKDR TGRARGFGF+VF+DP VAERVV EKH+
Sbjct: 10  IGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVMEKHL 69

Query: 183 IDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPGPTRTKKIFVGGLASTVTENEFKNYFEQ 362
           IDGR VEAKKAVPR+DQ N  N N SSV GSPGP RTKKIFVGGLASTVTE++F+ YF+Q
Sbjct: 70  IDGRNVEAKKAVPREDQ-NTLNKNSSSVNGSPGPARTKKIFVGGLASTVTESDFRKYFDQ 128

Query: 363 FGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVKRAVPKDSSP 542
           FG  TDVVVMYDHNTQRPRGFGFITYDSEE+V++VL KTFHELNGKMVEVKRAVPK+ SP
Sbjct: 129 FGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKELSP 188

Query: 543 GANRSP---YSYGLSRV 584
           G  R+    ++Y  SRV
Sbjct: 189 GPARNQLGGFNYSPSRV 205



 Score = 67.0 bits (162), Expect(2) = 3e-94
 Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 48/197 (24%)
 Frame = +2

Query: 677  PATVGRTGYSSFN----IGPNSDSVXXXXXXXXXXXXXXXR--PLNPMYTATPNRYAXXX 838
            P T GR+ +S F     +G N + V                   ++P Y+   +RY+   
Sbjct: 234  PVTAGRSNFSPFGSGYGMGLNFEQVLNPVYGGNSNISSNAGYGRVSPSYSGNASRYSNPI 293

Query: 839  XXXXXXXXXNASVLNSTNSNMWGNGNQNYTNNAPNSTSFLSQG------NNFGSFGAIWA 1000
                     ++SVLN    ++WGNG+ N+ +N  NS+SF+S G       +F S GA+W 
Sbjct: 294  GFSGGNGG-SSSVLNPIAHSLWGNGSINHASNTTNSSSFMSSGTGSSGMGSFSSMGALWG 352

Query: 1001 NP------------NSSN----------GVNAIGYGRKSGSSIAA--------GSYDDG- 1087
            +             NSSN          G+  +GYGR S + +A         G YD   
Sbjct: 353  SSANSEQGGGVRAVNSSNLSFGGGDFDIGLEGVGYGRNSRTGVAPASSHAASNGGYDGAY 412

Query: 1088 -----GGSFYADSTWRS 1123
                  GS Y D+TW+S
Sbjct: 413  ADFYEKGSLYGDNTWQS 429



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 32/90 (35%), Positives = 53/90 (58%)
 Frame = +3

Query: 297 KIFVGGLASTVTENEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLK 476
           K+F+GG++    E+  K YF  FG   + V+M D  T R RGFGF+ +      E+V+++
Sbjct: 7   KLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66

Query: 477 TFHELNGKMVEVKRAVPKDSSPGANRSPYS 566
             H ++G+ VE K+AVP++     N++  S
Sbjct: 67  K-HLIDGRNVEAKKAVPREDQNTLNKNSSS 95


>ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
           lyrata] gi|297328392|gb|EFH58811.1| hypothetical protein
           ARALYDRAFT_478119 [Arabidopsis lyrata subsp. lyrata]
          Length = 495

 Score =  320 bits (819), Expect(2) = 6e-94
 Identities = 159/199 (79%), Positives = 177/199 (88%), Gaps = 5/199 (2%)
 Frame = +3

Query: 3   IGGISWDTNEERLRDYFQTFGEVIEAVIMKDRTTGRARGFGFIVFSDPTVAERVVKEKHI 182
           IGGISWDTNEERL++YF +FGEVIEAVI+KDRTTGRARGFGF+VF+DP VAE V+ EKH 
Sbjct: 10  IGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEKHN 69

Query: 183 IDGRAVEAKKAVPRDDQQNRSNGNGSSVQGSPG-PTRTKKIFVGGLASTVTENEFKNYFE 359
           IDGR VEAKKAVPRDDQ   +  N SS+QGSPG P RT+KIFVGGL S+VTE++FK YFE
Sbjct: 70  IDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFE 129

Query: 360 QFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLKTFHELNGKMVEVKRAVPKDSS 539
           QFGTTTDVVVMYDHNTQRPRGFGFITYDSEE+VEKVLLKTFHELNGKMVEVKRAVPK+ S
Sbjct: 130 QFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKELS 189

Query: 540 PGANRSP----YSYGLSRV 584
           PG +RSP    YSYG++RV
Sbjct: 190 PGPSRSPLGAGYSYGVNRV 208



 Score = 52.8 bits (125), Expect(2) = 6e-94
 Identities = 51/208 (24%), Positives = 70/208 (33%), Gaps = 59/208 (28%)
 Frame = +2

Query: 677  PATVGRTGYSSFNIGPNSD-------SVXXXXXXXXXXXXXXXRPLNPMYTATPNRYAXX 835
            P   GR+G+++F+ G   +                        R ++P Y    NR+   
Sbjct: 237  PVGAGRSGFANFSSGYGMNVNFEQGLPTGFTGGTNFNGNVDYGRGMSPYYIGNTNRFGPA 296

Query: 836  XXXXXXXXXXNASVLNSTNSNMWGN-GNQNYTNNAPNSTSFLSQGNN----------FGS 982
                      N+S  +S   N+WGN G  NY NN  NS S    G +          FG+
Sbjct: 297  VGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNTTNSNSNTYMGGSSSVNNTLSGPFGN 356

Query: 983  FGAIWANPNSSNGVNA-----IGYG----------------RKSGSSIAAGS-------- 1075
             G  W  P   N   +      GYG                R  G++ AA S        
Sbjct: 357  SGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASA 416

Query: 1076 -----YDDGG-------GSFYADSTWRS 1123
                 YD  G       G+ Y+D TWRS
Sbjct: 417  TNNTGYDTAGLAEFYGNGAVYSDPTWRS 444



 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 32/87 (36%), Positives = 54/87 (62%)
 Frame = +3

Query: 297 KIFVGGLASTVTENEFKNYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEESVEKVLLK 476
           K+F+GG++    E   K YF  FG   + V++ D  T R RGFGF+ + ++ +V ++++ 
Sbjct: 7   KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT 65

Query: 477 TFHELNGKMVEVKRAVPKDSSPGANRS 557
             H ++G++VE K+AVP+D     NRS
Sbjct: 66  EKHNIDGRLVEAKKAVPRDDQNMVNRS 92


Top