BLASTX nr result

ID: Atractylodes21_contig00014534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014534
         (1768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182029.1| elongation factor EF-G [Arabidopsis thaliana] g...    63   5e-11
ref|NP_175135.1| Elongation factor G [Arabidopsis thaliana] gi|2...    63   5e-11
ref|XP_002880152.1| hypothetical protein ARALYDRAFT_483634 [Arab...    63   5e-11
ref|XP_002517899.1| translation elongation factor G, putative [R...    62   6e-11
ref|XP_002329879.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-11

>ref|NP_182029.1| elongation factor EF-G [Arabidopsis thaliana]
            gi|330255404|gb|AEC10498.1| elongation factor EF-G
            [Arabidopsis thaliana]
          Length = 754

 Score = 63.2 bits (152), Expect(2) = 5e-11
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +1

Query: 895  KLCYAKCKPVILEPVMMVELKVPTEFQGTVVGDLNR 1002
            +LCY   +PVILEPVM+VELKVPTEFQGTV GD+N+
Sbjct: 647  RLCYTAARPVILEPVMLVELKVPTEFQGTVAGDINK 682



 Score = 32.3 bits (72), Expect(2) = 5e-11
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 1080 NRRKCIIVGNNQDGDDYVINTLV 1148
            N+RK IIVGN+Q+GDD VI   V
Sbjct: 681  NKRKGIIVGNDQEGDDSVITANV 703


>ref|NP_175135.1| Elongation factor G [Arabidopsis thaliana]
            gi|27923772|sp|Q9C641.1|EFGM_ARATH RecName:
            Full=Elongation factor G, mitochondrial; Short=EF-Gmt;
            AltName: Full=Elongation factor G 1, mitochondrial;
            Short=mEF-G 1; AltName: Full=Elongation factor G1; Flags:
            Precursor gi|12321017|gb|AAG50635.1|AC083835_20
            mitochondrial elongation factor, putative [Arabidopsis
            thaliana] gi|332193994|gb|AEE32115.1| Elongation factor G
            [Arabidopsis thaliana]
          Length = 754

 Score = 63.2 bits (152), Expect(2) = 5e-11
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +1

Query: 895  KLCYAKCKPVILEPVMMVELKVPTEFQGTVVGDLNR 1002
            +LCY   +PVILEPVM+VELKVPTEFQGTV GD+N+
Sbjct: 647  RLCYTAARPVILEPVMLVELKVPTEFQGTVAGDINK 682



 Score = 32.3 bits (72), Expect(2) = 5e-11
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 1080 NRRKCIIVGNNQDGDDYVINTLV 1148
            N+RK IIVGN+Q+GDD VI   V
Sbjct: 681  NKRKGIIVGNDQEGDDSVITANV 703


>ref|XP_002880152.1| hypothetical protein ARALYDRAFT_483634 [Arabidopsis lyrata subsp.
            lyrata] gi|297325991|gb|EFH56411.1| hypothetical protein
            ARALYDRAFT_483634 [Arabidopsis lyrata subsp. lyrata]
          Length = 754

 Score = 63.2 bits (152), Expect(2) = 5e-11
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +1

Query: 895  KLCYAKCKPVILEPVMMVELKVPTEFQGTVVGDLNR 1002
            +LCY   +PVILEPVM+VELKVPTEFQGTV GD+N+
Sbjct: 647  RLCYTAARPVILEPVMLVELKVPTEFQGTVAGDINK 682



 Score = 32.3 bits (72), Expect(2) = 5e-11
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 1080 NRRKCIIVGNNQDGDDYVINTLV 1148
            N+RK IIVGN+Q+GDD VI   V
Sbjct: 681  NKRKGIIVGNDQEGDDSVITANV 703


>ref|XP_002517899.1| translation elongation factor G, putative [Ricinus communis]
            gi|223542881|gb|EEF44417.1| translation elongation factor
            G, putative [Ricinus communis]
          Length = 699

 Score = 61.6 bits (148), Expect(2) = 6e-11
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +1

Query: 901  CYAKCKPVILEPVMMVELKVPTEFQGTVVGDLNR 1002
            CY   KPVILEP+M+VELKVPTEFQGTV GD+N+
Sbjct: 594  CYTAAKPVILEPIMLVELKVPTEFQGTVAGDINK 627



 Score = 33.5 bits (75), Expect(2) = 6e-11
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 1080 NRRKCIIVGNNQDGDDYVINTLV 1148
            N+RK +IVGN+QDGDD VI   V
Sbjct: 626  NKRKGVIVGNDQDGDDSVITAHV 648


>ref|XP_002329879.1| predicted protein [Populus trichocarpa] gi|222871116|gb|EEF08247.1|
            predicted protein [Populus trichocarpa]
          Length = 693

 Score = 62.0 bits (149), Expect(2) = 6e-11
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +1

Query: 901  CYAKCKPVILEPVMMVELKVPTEFQGTVVGDLNR 1002
            CY   KPVILEPVM+VELKVPTEFQGTV GD+N+
Sbjct: 588  CYVAAKPVILEPVMLVELKVPTEFQGTVAGDINK 621



 Score = 33.1 bits (74), Expect(2) = 6e-11
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +3

Query: 1080 NRRKCIIVGNNQDGDDYVINTLV 1148
            N+RK +IVGN+QDGDD +I   V
Sbjct: 620  NKRKGVIVGNDQDGDDSIITAHV 642


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