BLASTX nr result

ID: Atractylodes21_contig00014480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014480
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284223.2| PREDICTED: ABC transporter B family member 2...   176   2e-42
ref|XP_002881657.1| At2g39480/F12L6.14 [Arabidopsis lyrata subsp...   176   2e-42
ref|XP_003536773.1| PREDICTED: ABC transporter B family member 2...   174   5e-42
gb|AAM19777.1| At2g39480/F12L6.14 [Arabidopsis thaliana]              172   2e-41
ref|NP_191092.1| ABC transporter B family member 20 [Arabidopsis...   172   2e-41

>ref|XP_002284223.2| PREDICTED: ABC transporter B family member 20-like [Vitis vinifera]
          Length = 1410

 Score =  176 bits (446), Expect = 2e-42
 Identities = 95/157 (60%), Positives = 106/157 (67%)
 Frame = -1

Query: 473 MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXPYMDTSNDALXXXXXXXXXXXXXXXXXX 294
           MM+SRGLFGWSPPHIQPLT             PY++ + DA+                  
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLEPNVDAVPVEVEEEIEEPEEIEPPP 60

Query: 293 XXXPFSKLFVCADRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIVQLLAHGDESSDLLFD 114
              PFS+LF CAD LDW LMV+GSLAAAAHGTALVVYLHYFAKIVQLL    ++ D LF 
Sbjct: 61  AAVPFSRLFACADGLDWGLMVIGSLAAAAHGTALVVYLHYFAKIVQLLDVVPDARDELFR 120

Query: 113 RFKELALTLVYIAGGVFAAGWIEVSCWILTGERQTAV 3
           R  ELA T+V+IA GVF AGWIEVSCWILTGERQTAV
Sbjct: 121 RSTELASTMVFIAVGVFVAGWIEVSCWILTGERQTAV 157


>ref|XP_002881657.1| At2g39480/F12L6.14 [Arabidopsis lyrata subsp. lyrata]
           gi|297327496|gb|EFH57916.1| At2g39480/F12L6.14
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1407

 Score =  176 bits (445), Expect = 2e-42
 Identities = 97/167 (58%), Positives = 108/167 (64%), Gaps = 10/167 (5%)
 Frame = -1

Query: 473 MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXPYMDT------SNDALXXXXXXXXXXXX 312
           MM+SRGLFGWSPPHIQPLT             PY+D       S  A             
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAENGGSGTAAQADDEEDMEEPE 60

Query: 311 XXXXXXXXXPFSKLFVCADRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIVQLLAHGDES 132
                    PFS+LF CADR DWVLMV GS+AAAAHGTAL+VYLHYFAKIVQ+LA   ES
Sbjct: 61  EMEPPPAAVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIVQVLAFPSES 120

Query: 131 SDLL----FDRFKELALTLVYIAGGVFAAGWIEVSCWILTGERQTAV 3
             L+    F+R  EL+LT+VYIAGGVF +GWIEVSCWILTGERQTAV
Sbjct: 121 DHLISDDQFNRLVELSLTIVYIAGGVFVSGWIEVSCWILTGERQTAV 167


>ref|XP_003536773.1| PREDICTED: ABC transporter B family member 20-like [Glycine max]
          Length = 1399

 Score =  174 bits (442), Expect = 5e-42
 Identities = 96/160 (60%), Positives = 108/160 (67%), Gaps = 3/160 (1%)
 Frame = -1

Query: 473 MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXPYMDT---SNDALXXXXXXXXXXXXXXX 303
           MMVSRGLFGWSPPHIQPLT             PY+D    ++ +                
Sbjct: 1   MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSTSQPMEVEEEMEEADEIE 60

Query: 302 XXXXXXPFSKLFVCADRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIVQLLAHGDESSDL 123
                 PFS+LF CADRLDW LM+VGSLAAA HGTALVVYLHYFAK++++   G  S + 
Sbjct: 61  PPPAAVPFSRLFACADRLDWFLMLVGSLAAALHGTALVVYLHYFAKVLRVPQQG--SPEE 118

Query: 122 LFDRFKELALTLVYIAGGVFAAGWIEVSCWILTGERQTAV 3
            F RFKELALT+VYIAGGVFAAGWIEVSCWILTGERQTAV
Sbjct: 119 QFHRFKELALTIVYIAGGVFAAGWIEVSCWILTGERQTAV 158


>gb|AAM19777.1| At2g39480/F12L6.14 [Arabidopsis thaliana]
          Length = 1407

 Score =  172 bits (437), Expect = 2e-41
 Identities = 95/167 (56%), Positives = 108/167 (64%), Gaps = 10/167 (5%)
 Frame = -1

Query: 473 MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXPYMDTSND------ALXXXXXXXXXXXX 312
           MM+SRGLFGWSPPHIQPLT             PY+D   +      A             
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAEHGGTGTAAQADDEEEMEGPE 60

Query: 311 XXXXXXXXXPFSKLFVCADRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIVQLLAHGDES 132
                    PFS+LF CADR DWVLMV GS+AAAAHGTAL+VYLHYFAKIVQ+LA   +S
Sbjct: 61  EMEPPPAAVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIVQVLAFPTDS 120

Query: 131 SDLL----FDRFKELALTLVYIAGGVFAAGWIEVSCWILTGERQTAV 3
             L+    F+R  EL+LT+VYIAGGVF +GWIEVSCWILTGERQTAV
Sbjct: 121 DHLISDDQFNRLLELSLTIVYIAGGVFISGWIEVSCWILTGERQTAV 167


>ref|NP_191092.1| ABC transporter B family member 20 [Arabidopsis thaliana]
           gi|75335876|sp|Q9M3B9.1|AB20B_ARATH RecName: Full=ABC
           transporter B family member 20; Short=ABC transporter
           ABCB.20; Short=AtABCB20; AltName: Full=Multidrug
           resistance protein 14; AltName: Full=P-glycoprotein 20
           gi|7019665|emb|CAB75766.1| P-glycoprotein-like
           [Arabidopsis thaliana] gi|332645847|gb|AEE79368.1| ABC
           transporter B family member 20 [Arabidopsis thaliana]
          Length = 1408

 Score =  172 bits (437), Expect = 2e-41
 Identities = 94/169 (55%), Positives = 109/169 (64%), Gaps = 12/169 (7%)
 Frame = -1

Query: 473 MMVSRGLFGWSPPHIQPLTXXXXXXXXXXXXXPYMD--------TSNDALXXXXXXXXXX 318
           MM+SRGLFGWSPPH+QPLT             PY+D        T   A           
Sbjct: 1   MMISRGLFGWSPPHMQPLTPVSEVSEPPESPSPYLDPGAESGGGTGTAAALAEADEEMDD 60

Query: 317 XXXXXXXXXXXPFSKLFVCADRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIVQLLAHGD 138
                      PFS+LF CADR DWVLM+VGS+AAAAHGTAL+VYLHYFAKIV +LA  +
Sbjct: 61  QDELEPPPAAVPFSQLFACADRFDWVLMIVGSVAAAAHGTALIVYLHYFAKIVDVLAFSN 120

Query: 137 ES----SDLLFDRFKELALTLVYIAGGVFAAGWIEVSCWILTGERQTAV 3
           +S    S+  FDR  +L+LT+VYIAGGVF +GWIEVSCWILTGERQTAV
Sbjct: 121 DSSQQRSEHQFDRLVQLSLTIVYIAGGVFISGWIEVSCWILTGERQTAV 169


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