BLASTX nr result

ID: Atractylodes21_contig00014381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014381
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL06913.1| AT4g37930/F20D10_50 [Arabidopsis thaliana]              68   7e-10
ref|NP_195506.1| glycine hydroxymethyltransferase [Arabidopsis t...    68   7e-10
ref|XP_002866922.1| hypothetical protein ARALYDRAFT_490821 [Arab...    67   2e-09
dbj|BAJ33788.1| unnamed protein product [Thellungiella halophila]      64   1e-08
ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, ...    64   2e-08

>gb|AAL06913.1| AT4g37930/F20D10_50 [Arabidopsis thaliana]
          Length = 517

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = +2

Query: 2   SNSSKFA*TLIERGYELIYGGTENYLVLVNLKPKGIDGS 118
           SNS+KFA TL+ERGYEL+ GGT+N+LVLVNLKPKGIDGS
Sbjct: 361 SNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGS 399


>ref|NP_195506.1| glycine hydroxymethyltransferase [Arabidopsis thaliana]
           gi|51701455|sp|Q9SZJ5.1|GLYM_ARATH RecName: Full=Serine
           hydroxymethyltransferase, mitochondrial; Short=SHMT;
           AltName: Full=Glycine hydroxymethyltransferase; AltName:
           Full=Serine methylase; Flags: Precursor
           gi|16226393|gb|AAL16156.1|AF428388_1 AT4g37930/F20D10_50
           [Arabidopsis thaliana] gi|4467099|emb|CAB37533.1|
           glycine hydroxymethyltransferase like protein
           [Arabidopsis thaliana] gi|6899945|emb|CAB71289.1| serine
           hydroxymethyl transferase [Arabidopsis thaliana]
           gi|7270776|emb|CAB80458.1| glycine
           hydroxymethyltransferase like protein [Arabidopsis
           thaliana] gi|16323083|gb|AAL15276.1| AT4g37930/F20D10_50
           [Arabidopsis thaliana] gi|17979462|gb|AAL50068.1|
           AT4g37930/F20D10_50 [Arabidopsis thaliana]
           gi|30102486|gb|AAP21161.1| At4g37930/F20D10_50
           [Arabidopsis thaliana] gi|332661455|gb|AEE86855.1|
           glycine hydroxymethyltransferase [Arabidopsis thaliana]
          Length = 517

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = +2

Query: 2   SNSSKFA*TLIERGYELIYGGTENYLVLVNLKPKGIDGS 118
           SNS+KFA TL+ERGYEL+ GGT+N+LVLVNLKPKGIDGS
Sbjct: 361 SNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGS 399


>ref|XP_002866922.1| hypothetical protein ARALYDRAFT_490821 [Arabidopsis lyrata subsp.
           lyrata] gi|297312758|gb|EFH43181.1| hypothetical protein
           ARALYDRAFT_490821 [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = +2

Query: 2   SNSSKFA*TLIERGYELIYGGTENYLVLVNLKPKGIDGS 118
           SNS+KFA TL+E+GYEL+ GGT+N+LVLVNLKPKGIDGS
Sbjct: 361 SNSAKFAQTLMEKGYELVSGGTDNHLVLVNLKPKGIDGS 399


>dbj|BAJ33788.1| unnamed protein product [Thellungiella halophila]
          Length = 518

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +2

Query: 2   SNSSKFA*TLIERGYELIYGGTENYLVLVNLKPKGIDGS 118
           SNS+KFA TL+E+GYEL+ GGT+N+LVLVNLK KGIDGS
Sbjct: 362 SNSAKFAQTLMEKGYELVSGGTDNHLVLVNLKSKGIDGS 400


>ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Vitis vinifera] gi|297736687|emb|CBI25704.3| unnamed
           protein product [Vitis vinifera]
          Length = 518

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = +2

Query: 2   SNSSKFA*TLIERGYELIYGGTENYLVLVNLKPKGIDGS 118
           SN SKFA TLI++GYEL+ GGTEN+LVLVNLK KGIDGS
Sbjct: 362 SNCSKFAETLIKKGYELVSGGTENHLVLVNLKNKGIDGS 400


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