BLASTX nr result

ID: Atractylodes21_contig00014371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014371
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   178   5e-43
gb|ABW74566.1| integrase [Boechera divaricarpa]                       152   3e-35
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   144   7e-33
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   144   1e-32
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   143   1e-32

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  178 bits (451), Expect = 5e-43
 Identities = 86/110 (78%), Positives = 97/110 (88%)
 Frame = +3

Query: 3    SPVARFETVRIILALAAQFQLPVFQFDVKSAFLNGDLNEEVYVAQPQGLVVDGAANKAYR 182
            SPVARFETVR++LALAAQ  LPV+QFDVKSAFLNGDL EEVYV+QPQG ++ G  NK Y+
Sbjct: 901  SPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYK 960

Query: 183  LRKALYGLKQAPRAWYSKIDSLFRESGFKRSENEPTLYLKQQVNGEFLLV 332
            LRKALYGLKQAPRAWYSKIDS F+ SGF+RS+NEPTLYLK+Q   EFLLV
Sbjct: 961  LRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLV 1010


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/110 (65%), Positives = 90/110 (81%)
 Frame = +3

Query: 3    SPVARFETVRIILALAAQFQLPVFQFDVKSAFLNGDLNEEVYVAQPQGLVVDGAANKAYR 182
            SPVARF+T+R +LAL A    P++QFDVKSAFLNG+L EEVYV QP+G +V+G     YR
Sbjct: 732  SPVARFDTLRTLLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVYR 791

Query: 183  LRKALYGLKQAPRAWYSKIDSLFRESGFKRSENEPTLYLKQQVNGEFLLV 332
            L KALYGLKQAPRAWY+KIDS F E+GF+RS++EPTLY+K+Q  G+ L+V
Sbjct: 792  LYKALYGLKQAPRAWYNKIDSYFAETGFERSKSEPTLYIKKQGAGDILVV 841


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/110 (64%), Positives = 86/110 (78%)
 Frame = +3

Query: 3    SPVARFETVRIILALAAQFQLPVFQFDVKSAFLNGDLNEEVYVAQPQGLVVDGAANKAYR 182
            SPVARFETVR +LALAA      +QFDVKSAFLNG+L EEVYV+Q +G +V       YR
Sbjct: 830  SPVARFETVRTLLALAAHMHWCXYQFDVKSAFLNGELVEEVYVSQXEGFIVPXKEEHVYR 889

Query: 183  LRKALYGLKQAPRAWYSKIDSLFRESGFKRSENEPTLYLKQQVNGEFLLV 332
            L+KALYGLKQAPRAWYSKIDS F E+GF+RS++EP LYLK+Q   + L++
Sbjct: 890  LKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDLLII 939


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/110 (63%), Positives = 86/110 (78%)
 Frame = +3

Query: 3    SPVARFETVRIILALAAQFQLPVFQFDVKSAFLNGDLNEEVYVAQPQGLVVDGAANKAYR 182
            SPVARFETVR +LALAA     V+QFDVKSAFLNG+L EEVY +QP+G +V       YR
Sbjct: 1001 SPVARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYR 1060

Query: 183  LRKALYGLKQAPRAWYSKIDSLFRESGFKRSENEPTLYLKQQVNGEFLLV 332
            L+ ALYGLKQAPRAWYSKIDS F E+GF++S++EP LYLK+Q   + L++
Sbjct: 1061 LKXALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLII 1110


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/110 (61%), Positives = 88/110 (80%)
 Frame = +3

Query: 3    SPVARFETVRIILALAAQFQLPVFQFDVKSAFLNGDLNEEVYVAQPQGLVVDGAANKAYR 182
            +PVAR +T+R I+A+AAQ    ++Q D+KSAFLNG L  E+YV QPQG VVDG  NK Y+
Sbjct: 991  APVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEXEIYVEQPQGFVVDGEENKVYK 1050

Query: 183  LRKALYGLKQAPRAWYSKIDSLFRESGFKRSENEPTLYLKQQVNGEFLLV 332
            L+KALYGLKQAPRAWY++IDS F E+GF RS++EPTLY+K + N + L+V
Sbjct: 1051 LKKALYGLKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQILIV 1100


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