BLASTX nr result

ID: Atractylodes21_contig00014335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014335
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   261   2e-67
ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago t...   254   3e-65
ref|XP_002880409.1| hypothetical protein ARALYDRAFT_481060 [Arab...   252   1e-64
ref|NP_565522.1| F-box/kelch-repeat protein SKIP6 [Arabidopsis t...   249   7e-64
ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   249   1e-63

>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score =  261 bits (668), Expect = 2e-67
 Identities = 120/181 (66%), Positives = 144/181 (79%)
 Frame = -3

Query: 1102 LGPKIYLIGGSINDIPSTSVWVLDCRVNKWESGPKMRVGREFAAAATVNGKIYVMGGCLV 923
            +G KI+++GGS+ND+ S +V V DCR   WE GP+MRVGREFAAA  V  KIYVMGGCLV
Sbjct: 116  IGSKIFVLGGSVNDVASPTVQVFDCRFGTWELGPRMRVGREFAAAGVVGRKIYVMGGCLV 175

Query: 922  DNRTRSVNWAEVFDPAVGVWCPLPSSSVDAKDKWMHANAVIEGKIYAMADRGGVVYDVAE 743
            D   +S NWAEVFDPA G W  +  S V+ ++KWMHA+AV+E KIYAMADRGGVV++   
Sbjct: 176  DTWAKSANWAEVFDPAAGRWAGV-ESPVEVREKWMHASAVVEEKIYAMADRGGVVFEPGT 234

Query: 742  MEWGRVPKRLDLGWRGRATVIDGVLYCYDYLGKIRGYDVEKDVWKELREVEKGLPKFLCG 563
             EWG V   LDLGWRGRA V+DGVLYCYDYLGKIRG+DV++ +WKEL+ +EKGLPKFLCG
Sbjct: 235  AEWGGVSTELDLGWRGRACVVDGVLYCYDYLGKIRGFDVKEGLWKELKGLEKGLPKFLCG 294

Query: 562  A 560
            A
Sbjct: 295  A 295



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 33/50 (66%), Positives = 42/50 (84%)
 Frame = -1

Query: 432 GGGKAMDIMCAEIEVRKDKDGGLSGSILWVDVILSVPVGSSILHCMAVAL 283
           G GK M+I CAEI ++K  DGGL GSI+W DVILSVP+GS+I+HC+AVA+
Sbjct: 312 GNGKEMEISCAEIAIQKCSDGGLRGSIVWSDVILSVPIGSAIVHCLAVAV 361


>ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago truncatula]
            gi|355491531|gb|AES72734.1| F-box/kelch-repeat protein
            SKIP6 [Medicago truncatula]
          Length = 356

 Score =  254 bits (648), Expect = 3e-65
 Identities = 111/178 (62%), Positives = 143/178 (80%)
 Frame = -3

Query: 1093 KIYLIGGSINDIPSTSVWVLDCRVNKWESGPKMRVGREFAAAATVNGKIYVMGGCLVDNR 914
            KIYLIGGS+ND+PS  VW+LDCR ++W  GP MRV REFAAA  ++GKIYV+GGC+ DN 
Sbjct: 106  KIYLIGGSVNDVPSRHVWILDCRFHRWLPGPSMRVAREFAAAGVIDGKIYVIGGCVPDNF 165

Query: 913  TRSVNWAEVFDPAVGVWCPLPSSSVDAKDKWMHANAVIEGKIYAMADRGGVVYDVAEMEW 734
            +RS NW+EVFDP    W  +PS   + ++KWMHA+AV++GK+YAMADRGGV +D     W
Sbjct: 166  SRSANWSEVFDPVNNRWESVPSPP-EIREKWMHASAVVDGKVYAMADRGGVSFDPYNGAW 224

Query: 733  GRVPKRLDLGWRGRATVIDGVLYCYDYLGKIRGYDVEKDVWKELREVEKGLPKFLCGA 560
              V + LD+GWRGRATV+DG+LYCYDYLGKI+G+DV+K +WKEL+ ++K LP+FLCGA
Sbjct: 225  ESVGRELDIGWRGRATVVDGILYCYDYLGKIKGFDVKKGLWKELKGLDKSLPRFLCGA 282



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 4/54 (7%)
 Frame = -1

Query: 432 GGGKAMDIMCAEIEVRK----DKDGGLSGSILWVDVILSVPVGSSILHCMAVAL 283
           G GK M+I CAEI+V+K    +KDG L G + W++ +LSVP GSSI+HC +VAL
Sbjct: 303 GKGKEMEIWCAEIDVKKKKKKNKDGELWGEVCWLNNVLSVPKGSSIVHCNSVAL 356


>ref|XP_002880409.1| hypothetical protein ARALYDRAFT_481060 [Arabidopsis lyrata subsp.
            lyrata] gi|297326248|gb|EFH56668.1| hypothetical protein
            ARALYDRAFT_481060 [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score =  252 bits (644), Expect = 1e-64
 Identities = 115/177 (64%), Positives = 140/177 (79%)
 Frame = -3

Query: 1090 IYLIGGSINDIPSTSVWVLDCRVNKWESGPKMRVGREFAAAATVNGKIYVMGGCLVDNRT 911
            IY+IGGSI D+PS+SVWVLDCR + W     MRVGREFAAA  ++GKIYV+GGC+VDN  
Sbjct: 128  IYVIGGSIRDVPSSSVWVLDCRFHTWRRVSNMRVGREFAAAGVIDGKIYVIGGCVVDNWA 187

Query: 910  RSVNWAEVFDPAVGVWCPLPSSSVDAKDKWMHANAVIEGKIYAMADRGGVVYDVAEMEWG 731
            RS+NWAE+FD     W P+ S  ++ ++KWMHA+AV+EGK+YAMADR GVVY+  E +W 
Sbjct: 188  RSINWAEMFDIKTQTWEPVASPGMEVREKWMHASAVMEGKVYAMADRNGVVYEPKEKKWD 247

Query: 730  RVPKRLDLGWRGRATVIDGVLYCYDYLGKIRGYDVEKDVWKELREVEKGLPKFLCGA 560
               KRLDLGWRGRA VID +LYCYDYLGKIRGYD ++ +WKEL+ VE  LPKFLCGA
Sbjct: 248  MPEKRLDLGWRGRACVIDNILYCYDYLGKIRGYDPKERIWKELKGVE-SLPKFLCGA 303


>ref|NP_565522.1| F-box/kelch-repeat protein SKIP6 [Arabidopsis thaliana]
            gi|75206206|sp|Q9SJ04.1|SKIP6_ARATH RecName:
            Full=F-box/kelch-repeat protein SKIP6; AltName:
            Full=SKP1-interacting partner 6 gi|4417287|gb|AAD20412.1|
            SKP1 interacting partner 6 (SKIP6), putative [Arabidopsis
            thaliana] gi|20268766|gb|AAM14086.1| putative SKP1
            interacting partner 6 (SKIP6) [Arabidopsis thaliana]
            gi|21689879|gb|AAM67500.1| putative SKP1 interacting
            partner 6 (SKIP6) [Arabidopsis thaliana]
            gi|330252151|gb|AEC07245.1| F-box/kelch-repeat protein
            SKIP6 [Arabidopsis thaliana]
          Length = 372

 Score =  249 bits (637), Expect = 7e-64
 Identities = 113/178 (63%), Positives = 141/178 (79%)
 Frame = -3

Query: 1093 KIYLIGGSINDIPSTSVWVLDCRVNKWESGPKMRVGREFAAAATVNGKIYVMGGCLVDNR 914
            +IY+IGGSI D+PS+SVWVLDCR + W     MRVGREFAAA  ++GKIYV+GGC+VDN 
Sbjct: 127  EIYVIGGSIRDVPSSSVWVLDCRFHTWRRVSNMRVGREFAAAGVIDGKIYVIGGCVVDNW 186

Query: 913  TRSVNWAEVFDPAVGVWCPLPSSSVDAKDKWMHANAVIEGKIYAMADRGGVVYDVAEMEW 734
             RS+NWAE+FD     W P+ S  ++ ++KWMHA+AV+EGK+YAMADR GVVY+  E +W
Sbjct: 187  ARSINWAEMFDIKTQTWEPVASPGMEVREKWMHASAVMEGKVYAMADRNGVVYEPKEKKW 246

Query: 733  GRVPKRLDLGWRGRATVIDGVLYCYDYLGKIRGYDVEKDVWKELREVEKGLPKFLCGA 560
                KRLDLGWRGRA VI+ +LYCYDYLGKIRGYD ++ +W+EL+ VE  LPKFLCGA
Sbjct: 247  EMPEKRLDLGWRGRACVIENILYCYDYLGKIRGYDPKERIWRELKGVE-SLPKFLCGA 303


>ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 362

 Score =  249 bits (635), Expect = 1e-63
 Identities = 110/181 (60%), Positives = 143/181 (79%)
 Frame = -3

Query: 1102 LGPKIYLIGGSINDIPSTSVWVLDCRVNKWESGPKMRVGREFAAAATVNGKIYVMGGCLV 923
            LGP IY++GGSI+D+PS +VW+LDCR N+W  GP MRVGREFAAA  ++GKIYV+GGC+ 
Sbjct: 117  LGPTIYVLGGSIHDVPSPNVWLLDCRFNRWLRGPSMRVGREFAAAGVLHGKIYVLGGCVA 176

Query: 922  DNRTRSVNWAEVFDPAVGVWCPLPSSSVDAKDKWMHANAVIEGKIYAMADRGGVVYDVAE 743
            D  +RS NWAEV DPA G W  + +S  + ++KWMHA+AV+  +IYAMADRGG+ Y+ + 
Sbjct: 177  DTWSRSANWAEVLDPATGQWERV-ASPTEVREKWMHASAVVGERIYAMADRGGIAYEPSS 235

Query: 742  MEWGRVPKRLDLGWRGRATVIDGVLYCYDYLGKIRGYDVEKDVWKELREVEKGLPKFLCG 563
              W  V   LD GWRGRA V++G+LYCYDYLGKI+G+DV + VW+EL+ +EKGLP+FLCG
Sbjct: 236  GAWESVGVELDHGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCG 295

Query: 562  A 560
            A
Sbjct: 296  A 296


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