BLASTX nr result

ID: Atractylodes21_contig00014324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014324
         (1404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244...   233   4e-69
emb|CBI18563.3| unnamed protein product [Vitis vinifera]              228   1e-68
ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g...   229   8e-67
emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]   226   8e-67
ref|XP_002306453.1| f-box family protein [Populus trichocarpa] g...   209   5e-62

>ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera]
          Length = 332

 Score =  233 bits (595), Expect(2) = 4e-69
 Identities = 140/275 (50%), Positives = 171/275 (62%), Gaps = 16/275 (5%)
 Frame = -2

Query: 914 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 735
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++TAVGK  S+ GK K
Sbjct: 77  CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGK--SSAGKAK 134

Query: 734 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFA--SNSVTHM 561
           + V SE+GKSG   GF+HE   +PILW+  PQ SHLL+LLRATQNPNPN +  SNSVT +
Sbjct: 135 SAV-SEIGKSGLGGGFDHEIPSNPILWAS-PQNSHLLALLRATQNPNPNPSPISNSVT-V 191

Query: 560 KDQGFMVGSNMSS--------------LGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXX 423
           KD G M+GS+M+S              +G +              WR             
Sbjct: 192 KDDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYWRNNQHQTQQHQQNS 251

Query: 422 XXXQRGIMATGHEVQSTENNPGQRYQRIRSSSPANYYHHDQTTPLILGGNAANXXXXXXX 243
              Q+     G EVQ+T     + YQR+RSS+  NYY     +P++L    ++       
Sbjct: 252 HHQQQNGFILG-EVQNT--GIQELYQRLRSST--NYY--TDHSPVVLSNAVSS------S 298

Query: 242 XTILDSAPVLASGELGFWNQTLPWSDLPTANGAYP 138
            +IL+SAP+ A GELG+WN T  WSDLPT NGAYP
Sbjct: 299 SSILESAPI-AGGELGYWNPTFSWSDLPTTNGAYP 332



 Score = 56.2 bits (134), Expect(2) = 4e-69
 Identities = 34/83 (40%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = -3

Query: 1219 MIQELFGGGAAGLLNRDRNLPVSG-VFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSD 1043
            MIQEL GGGA GL+  +R + ++G + E                              S 
Sbjct: 1    MIQELLGGGA-GLIGGERKITINGGILEASPSPSPSPSPSSSSSGNTTTVTTAAAATTSS 59

Query: 1042 -NQKLRCPRCDSSNTKFCYYNNY 977
             ++ LRCPRCDSSNTKFCYYNNY
Sbjct: 60   ASENLRCPRCDSSNTKFCYYNNY 82


>emb|CBI18563.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  228 bits (581), Expect(2) = 1e-68
 Identities = 140/289 (48%), Positives = 171/289 (59%), Gaps = 30/289 (10%)
 Frame = -2

Query: 914 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 735
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++TAVGK  S+ GK K
Sbjct: 150 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGK--SSAGKAK 207

Query: 734 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFA--SNSVTHM 561
           + V SE+GKSG   GF+HE   +PILW+  PQ SHLL+LLRATQNPNPN +  SNSVT +
Sbjct: 208 SAV-SEIGKSGLGGGFDHEIPSNPILWAS-PQNSHLLALLRATQNPNPNPSPISNSVT-V 264

Query: 560 KDQGFMVGSNMSS--------------LGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXX 423
           KD G M+GS+M+S              +G +              WR             
Sbjct: 265 KDDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYWRNNQHQTQQHQQNS 324

Query: 422 XXXQRGIMATGHEVQSTENNPGQRYQRIRSSSPANYYHHDQTTPLILGGNAAN------- 264
              Q+     G EVQ+T     + YQR+RSS+  NYY     +P++L    ++       
Sbjct: 325 HHQQQNGFILG-EVQNT--GIQELYQRLRSST--NYY--TDHSPVVLSNAVSSSSSILES 377

Query: 263 -------XXXXXXXXTILDSAPVLASGELGFWNQTLPWSDLPTANGAYP 138
                          +IL+SAP+ A GELG+WN T  WSDLPT NGAYP
Sbjct: 378 APIAGVLSNAVSSSSSILESAPI-AGGELGYWNPTFSWSDLPTTNGAYP 425



 Score = 60.1 bits (144), Expect(2) = 1e-68
 Identities = 36/87 (41%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
 Frame = -3

Query: 1231 RKVKMIQELFGGGAAGLLNRDRNLPVSG-VFEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1055
            RK +MIQEL GGGA GL+  +R + ++G + E                            
Sbjct: 70   RKKRMIQELLGGGA-GLIGGERKITINGGILEASPSPSPSPSPSSSSSGNTTTVTTAAAA 128

Query: 1054 XXSD-NQKLRCPRCDSSNTKFCYYNNY 977
              S  ++ LRCPRCDSSNTKFCYYNNY
Sbjct: 129  TTSSASENLRCPRCDSSNTKFCYYNNY 155


>ref|XP_002310753.1| f-box family protein [Populus trichocarpa]
           gi|118482074|gb|ABK92968.1| unknown [Populus
           trichocarpa] gi|222853656|gb|EEE91203.1| f-box family
           protein [Populus trichocarpa]
          Length = 323

 Score =  229 bits (583), Expect(2) = 8e-67
 Identities = 131/273 (47%), Positives = 167/273 (61%), Gaps = 14/273 (5%)
 Frame = -2

Query: 914 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 735
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++ +VGK  S T K+K
Sbjct: 78  CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSASVGK--SGTNKMK 135

Query: 734 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFASNSVTHMKD 555
             ++S++G+SGF NGFEHE + SPI+W+  PQ SH+L+LLRATQNPNP+  SNS+  +K+
Sbjct: 136 -TMASDIGRSGFGNGFEHELSSSPIMWAS-PQNSHILALLRATQNPNPSTLSNSI-FVKE 192

Query: 554 QGFMVGS-------------NMSSLGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXXXXX 414
           +G ++G+             N  +LG +P             W+                
Sbjct: 193 EGGLIGNQFISEPGVGTAALNARTLGLDPISQVPSLGLCSPFWKSNQH------------ 240

Query: 413 QRGIMATGHEVQSTENNPGQR-YQRIRSSSPANYYHHDQTTPLILGGNAANXXXXXXXXT 237
                  G  V   +N+  Q  YQR+RSS+  NYY  D  + ++L   A +        T
Sbjct: 241 ----QQNGFTVGEAQNSGIQELYQRLRSST--NYY-TDNPSAIVLSNVATS--SSTSTST 291

Query: 236 ILDSAPVLASGELGFWNQTLPWSDLPTANGAYP 138
           IL+SAPV A GELG+WN    WSDLPT NGAYP
Sbjct: 292 ILESAPV-AGGELGYWNPAFSWSDLPTTNGAYP 323



 Score = 53.1 bits (126), Expect(2) = 8e-67
 Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = -3

Query: 1219 MIQELFGGGAAGLLNRDRNLPVSGVF----EXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1052
            MIQEL GG  AGL+  +R +P++                                     
Sbjct: 1    MIQELLGG--AGLIGGERKIPINATILEGTPSPSPSLSPSPSPSSSTTSAATTSATNSTP 58

Query: 1051 XSDNQKLRCPRCDSSNTKFCYYNNY 977
             S  + LRCPRCDSSNTKFCYYNNY
Sbjct: 59   SSAQENLRCPRCDSSNTKFCYYNNY 83


>emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]
          Length = 309

 Score =  226 bits (575), Expect(2) = 8e-67
 Identities = 134/261 (51%), Positives = 163/261 (62%), Gaps = 2/261 (0%)
 Frame = -2

Query: 914 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 735
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++TAVGK  S+ GK K
Sbjct: 77  CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGK--SSAGKAK 134

Query: 734 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFA--SNSVTHM 561
           + V SE+GKSG   GF+HE   +PILW+  PQ SHLL+LLRATQNPNPN +  SNSVT +
Sbjct: 135 SAV-SEIGKSGLGGGFDHEIPSNPILWAS-PQNSHLLALLRATQNPNPNPSPISNSVT-V 191

Query: 560 KDQGFMVGSNMSSLGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXXXXXQRGIMATGHEV 381
           KD G M+GS+M+S                                        MA  + V
Sbjct: 192 KDDGVMIGSHMTS-----------ESGVGTALTGETINIKLNSTNKTATINSKMAL-YLV 239

Query: 380 QSTENNPGQRYQRIRSSSPANYYHHDQTTPLILGGNAANXXXXXXXXTILDSAPVLASGE 201
           +       + YQR+RSS+  NYY     +P++L    ++        +IL+SAP+ A GE
Sbjct: 240 KFQNTGIQELYQRLRSST--NYY--TDHSPVVLSNAVSS------SSSILESAPI-AGGE 288

Query: 200 LGFWNQTLPWSDLPTANGAYP 138
           LG+WN T  WSDLPT NGAYP
Sbjct: 289 LGYWNPTFSWSDLPTTNGAYP 309



 Score = 56.2 bits (134), Expect(2) = 8e-67
 Identities = 34/83 (40%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = -3

Query: 1219 MIQELFGGGAAGLLNRDRNLPVSG-VFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSD 1043
            MIQEL GGGA GL+  +R + ++G + E                              S 
Sbjct: 1    MIQELLGGGA-GLIGGERKITINGGILEASPSPSPSPSPSSSSSGNTTTVTTAAAATTSS 59

Query: 1042 -NQKLRCPRCDSSNTKFCYYNNY 977
             ++ LRCPRCDSSNTKFCYYNNY
Sbjct: 60   ASENLRCPRCDSSNTKFCYYNNY 82


>ref|XP_002306453.1| f-box family protein [Populus trichocarpa]
           gi|222855902|gb|EEE93449.1| f-box family protein
           [Populus trichocarpa]
          Length = 269

 Score =  209 bits (531), Expect(2) = 5e-62
 Identities = 118/260 (45%), Positives = 153/260 (58%), Gaps = 1/260 (0%)
 Frame = -2

Query: 914 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 735
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++ +VGK  S T K+K
Sbjct: 68  CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSASVGK--SGTSKIK 125

Query: 734 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFASNSVTHMKD 555
             ++SE+G+SGF NGF++E + SPI+    PQ SH+ +LLRATQNPNP+   NS++ +K 
Sbjct: 126 -TIASEIGRSGFGNGFDYELSSSPIM-RASPQNSHIFALLRATQNPNPSTPCNSIS-VKQ 182

Query: 554 QGFMVGSNMSSLGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXXXXXQRGIMATGHEVQS 375
           +GF++G +M                                                   
Sbjct: 183 EGFLIGKHM--------------------------------------------------I 192

Query: 374 TENNPGQR-YQRIRSSSPANYYHHDQTTPLILGGNAANXXXXXXXXTILDSAPVLASGEL 198
           T+N+  Q  YQR+RSS+  NYY  + +  ++     ++        TIL+SAPV A GE 
Sbjct: 193 TQNSGIQELYQRLRSST--NYYTDNPSAIVLSNVTTSSSTSTSTSSTILESAPV-AGGEF 249

Query: 197 GFWNQTLPWSDLPTANGAYP 138
            +WNQ   WS LPT NGAYP
Sbjct: 250 SYWNQAFSWSGLPTTNGAYP 269



 Score = 57.0 bits (136), Expect(2) = 5e-62
 Identities = 33/81 (40%), Positives = 40/81 (49%)
 Frame = -3

Query: 1219 MIQELFGGGAAGLLNRDRNLPVSGVFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDN 1040
            MIQEL GG  AGL++ +R +P++                                  S  
Sbjct: 1    MIQELLGG--AGLISGERKIPINATI------LDQGAPSPSPSSSTTTTTSATNSTPSAQ 52

Query: 1039 QKLRCPRCDSSNTKFCYYNNY 977
            +KLRCPRCDSSNTKFCYYNNY
Sbjct: 53   EKLRCPRCDSSNTKFCYYNNY 73


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