BLASTX nr result

ID: Atractylodes21_contig00014274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014274
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional ...   123   6e-46
ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional ...   117   1e-45
ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional ...   119   3e-45
ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional ...   122   3e-45
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   134   7e-45

>ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 402

 Score =  123 bits (308), Expect(3) = 6e-46
 Identities = 59/74 (79%), Positives = 63/74 (85%)
 Frame = +2

Query: 470 AAAERHLQAYNGTLMPNVEQLFRLNWATFGAGEKRQDDTPDYTIFVGDLAADVTDYTLQE 649
           A AER LQ YNGT+MPN  Q FRLNWATF AGE+R DD+PD+TIFVGDLAADVTDY LQE
Sbjct: 117 AGAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPDHTIFVGDLAADVTDYLLQE 176

Query: 650 TFRAHYPSVKGAKV 691
           TFRA YPS KGAKV
Sbjct: 177 TFRARYPSAKGAKV 190



 Score = 79.3 bits (194), Expect(3) = 6e-46
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +3

Query: 243 IRTLWIGDLQYWMDEQYLLSCFAQTGEVVSAKVIRNKQSAQSEG 374
           +RTLWIGDLQYWMDE YL +CFA TGE+ S KVIRNKQ++QSEG
Sbjct: 64  VRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEG 107



 Score = 28.9 bits (63), Expect(3) = 6e-46
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 152 QPASADEIRTLWI 190
           QP SADE+RTLWI
Sbjct: 57  QPTSADEVRTLWI 69


>ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 409

 Score =  117 bits (292), Expect(3) = 1e-45
 Identities = 59/75 (78%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
 Frame = +2

Query: 470 AAAERHLQAYNGTLMPNVEQLFRLNWATFGAGEK-RQDDTPDYTIFVGDLAADVTDYTLQ 646
           A AER LQ YNG +MPN  Q FRLNWATF AGE+ R DD+PDYTIFVGDLAADVTDY LQ
Sbjct: 118 AGAERILQTYNGAIMPNGGQSFRLNWATFSAGERSRHDDSPDYTIFVGDLAADVTDYLLQ 177

Query: 647 ETFRAHYPSVKGAKV 691
           ETFRA Y SVKGAKV
Sbjct: 178 ETFRARYNSVKGAKV 192



 Score = 80.5 bits (197), Expect(3) = 1e-45
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +3

Query: 243 IRTLWIGDLQYWMDEQYLLSCFAQTGEVVSAKVIRNKQSAQSEG 374
           +RTLWIGDLQYWMDE YL +CFA TGEV S KVIRNKQ++QSEG
Sbjct: 65  VRTLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEG 108



 Score = 33.1 bits (74), Expect(3) = 1e-45
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 143 PNHQPASADEIRTLWI 190
           P  QPASADE+RTLWI
Sbjct: 55  PQQQPASADEVRTLWI 70


>ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 411

 Score =  119 bits (297), Expect(3) = 3e-45
 Identities = 60/75 (80%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
 Frame = +2

Query: 470 AAAERHLQAYNGTLMPNVEQLFRLNWATFGAGEK-RQDDTPDYTIFVGDLAADVTDYTLQ 646
           A AER LQ YNG +MPN  Q FRLNWATF AGE+ RQDD+PDYTIFVGDLAADVTDY LQ
Sbjct: 119 AGAERILQTYNGAIMPNGGQSFRLNWATFSAGERSRQDDSPDYTIFVGDLAADVTDYLLQ 178

Query: 647 ETFRAHYPSVKGAKV 691
           ETFRA Y SVKGAKV
Sbjct: 179 ETFRARYNSVKGAKV 193



 Score = 79.7 bits (195), Expect(3) = 3e-45
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +3

Query: 243 IRTLWIGDLQYWMDEQYLLSCFAQTGEVVSAKVIRNKQSAQSEG 374
           +RTLWIGDLQYWMDE YL +CFA TGEV S KVIRNKQ++QSEG
Sbjct: 66  VRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTSQSEG 109



 Score = 30.4 bits (67), Expect(3) = 3e-45
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +2

Query: 152 QPASADEIRTLWI 190
           QPASADE+RTLWI
Sbjct: 59  QPASADEVRTLWI 71


>ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 397

 Score =  122 bits (305), Expect(3) = 3e-45
 Identities = 58/74 (78%), Positives = 63/74 (85%)
 Frame = +2

Query: 470 AAAERHLQAYNGTLMPNVEQLFRLNWATFGAGEKRQDDTPDYTIFVGDLAADVTDYTLQE 649
           A AER LQ YNGT+MPN  Q FRLNWAT  AGE+R DD+PD+TIFVGDLAADVTDY LQE
Sbjct: 113 AGAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGDLAADVTDYLLQE 172

Query: 650 TFRAHYPSVKGAKV 691
           TFRA YPS+KGAKV
Sbjct: 173 TFRARYPSIKGAKV 186



 Score = 78.2 bits (191), Expect(3) = 3e-45
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = +3

Query: 243 IRTLWIGDLQYWMDEQYLLSCFAQTGEVVSAKVIRNKQSAQSEG 374
           +RTLWIGDLQYWMDE YL +C A TGEV S KVIRNKQ++QSEG
Sbjct: 60  VRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEG 103



 Score = 28.9 bits (63), Expect(3) = 3e-45
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 152 QPASADEIRTLWI 190
           QP SADE+RTLWI
Sbjct: 53  QPTSADEVRTLWI 65


>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Vitis vinifera]
          Length = 417

 Score =  134 bits (336), Expect(2) = 7e-45
 Identities = 64/74 (86%), Positives = 66/74 (89%)
 Frame = +2

Query: 470 AAAERHLQAYNGTLMPNVEQLFRLNWATFGAGEKRQDDTPDYTIFVGDLAADVTDYTLQE 649
           AAAER LQ YNGTLMPN EQ FRLNWAT GAGE+R DDTPDYTIFVGDLA+DVTDY LQE
Sbjct: 142 AAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQE 201

Query: 650 TFRAHYPSVKGAKV 691
           TFR HYPSVKGAKV
Sbjct: 202 TFRGHYPSVKGAKV 215



 Score = 73.2 bits (178), Expect(2) = 7e-45
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = +3

Query: 243 IRTLWIGDLQYWMDEQYLLSCFAQTGEVVSAKVIRNKQSAQSEG 374
           IR+LWIGDLQ WM+E YL  CF+QTGEVVS KVIRNKQ+ Q EG
Sbjct: 89  IRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEG 132


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