BLASTX nr result

ID: Atractylodes21_contig00014206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014206
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF48665.1| leucine-rich repeat/extensin 1 [Nicotiana tabacum]     59   1e-06
dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbagi...    58   3e-06
ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|2...    58   3e-06
gb|EAW71470.1| hCG2041386 [Homo sapiens]                               57   4e-06

>dbj|BAF48665.1| leucine-rich repeat/extensin 1 [Nicotiana tabacum]
          Length = 723

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = +1

Query: 13  GKVFDDARNCIVGKANQRSARECSSRDARPVDCRKLQC 126
           G+V D   NCI GK +QRSA+ECSS DA+P DCRK QC
Sbjct: 338 GRVIDGEENCIAGKEDQRSAKECSSDDAKPYDCRKSQC 375


>dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia]
           gi|127058167|dbj|BAF48664.1| leucine-rich
           repeat/extensin [Nicotiana plumbaginifolia]
          Length = 725

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +1

Query: 13  GKVFDDARNCIVGKANQRSARECSSRDARPVDCRKLQC 126
           G++ D   NCI GK +QRSA+ECSS DA+P DCRK QC
Sbjct: 338 GRIVDGEENCIAGKEDQRSAKECSSDDAKPYDCRKSQC 375


>ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|222873601|gb|EEF10732.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +1

Query: 13  GKVFDDARNCIVGKANQRSARECSSRDARPVDCRKLQCGG 132
           G V +  +NCI GK NQRSA++CSS  ARP+DC K +CGG
Sbjct: 334 GAVSNGTQNCIPGKMNQRSAKQCSSEAARPIDCSKFKCGG 373


>gb|EAW71470.1| hCG2041386 [Homo sapiens]
          Length = 184

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 671 VLGEDSEVGGGGDRWLPCGGDWWLPCGGDW*VPCGGDWWLPCGGDWWLSCGGDPWLPSGG 492
           ++G D+    GGD W   GGD W   GGD     GGD W   GGD W   GGD W   GG
Sbjct: 23  IVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGG 82



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 671 VLGEDSEVGGGGDRWLPCGGDWWLPCGGDW*VPCGGDWWLPCGGDWWLSCGGDPWLPSGG 492
           ++G D+    GGD W   GGD W   GGD     GGD W   GGD W   GGD W   GG
Sbjct: 31  IVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGG 90



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 671 VLGEDSEVGGGGDRWLPCGGDWWLPCGGDW*VPCGGDWWLPCGGDWWLSCGGDPWLPSGG 492
           ++G D+    GGD W   GGD W   GGD     GGD W   GGD W   GGD W   GG
Sbjct: 39  IVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGG 98



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 671 VLGEDSEVGGGGDRWLPCGGDWWLPCGGDW*VPCGGDWWLPCGGDWWLSCGGDPWLPSGG 492
           ++G D+    GGD W   GGD W   GGD     GGD W   GGD W   GGD W   GG
Sbjct: 47  IVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGG 106



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 671 VLGEDSEVGGGGDRWLPCGGDWWLPCGGDW*VPCGGDWWLPCGGDWWLSCGGDPWLPSGG 492
           ++G D+    GGD W   GGD W   GGD     GGD W   GGD W   GGD W   GG
Sbjct: 55  IVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGG 114



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 671 VLGEDSEVGGGGDRWLPCGGDWWLPCGGDW*VPCGGDWWLPCGGDWWLSCGGDPWLPSGG 492
           ++G D+    GGD W   GGD W   GGD     GGD W   GGD W   GGD W   GG
Sbjct: 63  IVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGG 122



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 671 VLGEDSEVGGGGDRWLPCGGDWWLPCGGDW*VPCGGDWWLPCGGDWWLSCGGDPWLPSGG 492
           ++G D+    GGD W   GGD W   GGD     GGD W   GGD W   GGD W   GG
Sbjct: 71  IVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGG 130



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 671 VLGEDSEVGGGGDRWLPCGGDWWLPCGGDW*VPCGGDWWLPCGGDWWLSCGGDPWLPSGG 492
           ++G D+    GGD W   GGD W   GGD     GGD W   GGD W   GGD W   GG
Sbjct: 79  IVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGGDTWAIVGG 138


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