BLASTX nr result

ID: Atractylodes21_contig00014196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014196
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]           207   4e-51
ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycin...   179   1e-42
ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycin...   178   2e-42
emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]   177   5e-42
ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   176   7e-42

>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
          Length = 144

 Score =  207 bits (527), Expect = 4e-51
 Identities = 103/146 (70%), Positives = 117/146 (80%), Gaps = 2/146 (1%)
 Frame = +1

Query: 319 MGLSPYPTPSDAGVLCVILVNTAMSISIMKEIVRSILHVIGIHVASWENYSNQAALTESA 498
           MGLSPY TP+DAGV CVILVNTA SISI+K +VRSILHVIGI+ ASWE YS +  L +  
Sbjct: 1   MGLSPYTTPADAGVFCVILVNTATSISIVKGMVRSILHVIGINFASWEEYSIEGPL-DPF 59

Query: 499 ECRGSPSETYMEEFRSRTPSQLYDSLC--RRTKQECSVCLVEFKPDAEINRLSCGHVFHK 672
           ECRGSPS +YMEEFRSRTP+  YDSLC      QEC VCL +F  DAEIN LSCGHVFHK
Sbjct: 60  ECRGSPSGSYMEEFRSRTPAVRYDSLCISNLPTQECPVCLADFNHDAEINHLSCGHVFHK 119

Query: 673 SCLEKWLKYWNITCPLCRNHMMMPKE 750
            CLEKWLK WN+TCPLCR++ +MP+E
Sbjct: 120 LCLEKWLKNWNVTCPLCRDY-IMPQE 144


>ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycine max]
           gi|255625823|gb|ACU13256.1| unknown [Glycine max]
          Length = 154

 Score =  179 bits (454), Expect = 1e-42
 Identities = 88/146 (60%), Positives = 110/146 (75%), Gaps = 6/146 (4%)
 Frame = +1

Query: 319 MGLSPYPTPSDAGVLCVILVNTAMSISIMKEIVRSILHVIGIHVASWENYSNQA----AL 486
           MGLS  P PS+ GVLCV+LVNT +SISI K IVR+ILH++GIH+ S     +      A 
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAA 59

Query: 487 TESAECRGSPSETYMEEFRSRTPSQLYDSLC--RRTKQECSVCLVEFKPDAEINRLSCGH 660
            ES E   SPSE+Y+EEFRSRTP+  +DS+C  +R + +CSVCL +F+P++EINRLSCGH
Sbjct: 60  PESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGH 119

Query: 661 VFHKSCLEKWLKYWNITCPLCRNHMM 738
           +FHK CLEKWL YWNITCPLCR  +M
Sbjct: 120 LFHKVCLEKWLDYWNITCPLCRTPLM 145


>ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycine max]
           gi|255639664|gb|ACU20126.1| unknown [Glycine max]
          Length = 155

 Score =  178 bits (452), Expect = 2e-42
 Identities = 89/147 (60%), Positives = 115/147 (78%), Gaps = 7/147 (4%)
 Frame = +1

Query: 319 MGLSPYPTPSDAGVLCVILVNTAMSISIMKEIVRSILHVIGIHVASWENYSNQA---ALT 489
           MGLS  P PS+ GVLCV+LVNT +SISI K IVR+ILH++GIH++S  + S  +   +LT
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSSTSPSSPDPSLT 59

Query: 490 --ESAECRGSPSETYMEEFRSRTPSQLYDSLC--RRTKQECSVCLVEFKPDAEINRLSCG 657
             ES E   SPSE+Y+EEFRSRTP+  +DS+C  ++ + +CSVCL +F+P++EINRLSCG
Sbjct: 60  APESFEFHLSPSESYIEEFRSRTPTLRFDSVCCCKQPEHDCSVCLTQFEPESEINRLSCG 119

Query: 658 HVFHKSCLEKWLKYWNITCPLCRNHMM 738
           H+FHK CLEKWL YWNITCPLCR  +M
Sbjct: 120 HLFHKVCLEKWLDYWNITCPLCRTPLM 146


>emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]
          Length = 223

 Score =  177 bits (448), Expect = 5e-42
 Identities = 92/161 (57%), Positives = 115/161 (71%), Gaps = 3/161 (1%)
 Frame = +1

Query: 313 TKMGLSPYPTPSDAGVLCVILVNTAMSISIMKEIVRSILHVIGIHVASWENYSNQAALT- 489
           + MGLS  P PS+ GVLCV+LVNTA+SISI K IVR+ILHVIGIH+++  + S+    T 
Sbjct: 71  SSMGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTS 129

Query: 490 ESAECRGSPSETYMEEFRSRTPSQLYDSLC--RRTKQECSVCLVEFKPDAEINRLSCGHV 663
           E  E R +PSET MEEFRSR P+  +D++C  +R + +C+VCL  F+PD+EIN L CGH 
Sbjct: 130 EPFEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHF 189

Query: 664 FHKSCLEKWLKYWNITCPLCRNHMMMPKEVEENTCPM*GFW 786
           FHK CLEKWL YWNITCPLCR  +M     EE +C    FW
Sbjct: 190 FHKVCLEKWLDYWNITCPLCRTPLM---PEEETSC----FW 223


>ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 151

 Score =  176 bits (447), Expect = 7e-42
 Identities = 92/159 (57%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
 Frame = +1

Query: 319 MGLSPYPTPSDAGVLCVILVNTAMSISIMKEIVRSILHVIGIHVASWENYSNQAALT-ES 495
           MGLS  P PS+ GVLCV+LVNTA+SISI K IVR+ILHVIGIH+++  + S+    T E 
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTSEP 59

Query: 496 AECRGSPSETYMEEFRSRTPSQLYDSLC--RRTKQECSVCLVEFKPDAEINRLSCGHVFH 669
            E R +PSET MEEFRSR P+  +D++C  +R + +C+VCL  F+PD+EIN L CGH FH
Sbjct: 60  FEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHFFH 119

Query: 670 KSCLEKWLKYWNITCPLCRNHMMMPKEVEENTCPM*GFW 786
           K CLEKWL YWNITCPLCR  +M     EE +C    FW
Sbjct: 120 KVCLEKWLDYWNITCPLCRTPLM---PEEETSC----FW 151


Top