BLASTX nr result

ID: Atractylodes21_contig00014193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014193
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254...    63   3e-08
ref|XP_002308277.1| single myb histone [Populus trichocarpa] gi|...    62   6e-08
ref|XP_002514135.1| DNA binding protein, putative [Ricinus commu...    60   2e-07
ref|XP_002330511.1| single myb histone [Populus trichocarpa] gi|...    58   7e-07
emb|CCA29094.1| putative MYB transcription factor [Rosa rugosa] ...    56   4e-06

>ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254369 [Vitis vinifera]
           gi|297738637|emb|CBI27882.3| unnamed protein product
           [Vitis vinifera]
          Length = 281

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/38 (76%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
 Frame = +3

Query: 3   GTGKWKNIQKDPEFNHFLYSRSNIDLKDT-KLLQVSAA 113
           GTGKWKNIQKDPEFNHFL++RSNIDLKD  + + VSA+
Sbjct: 24  GTGKWKNIQKDPEFNHFLFTRSNIDLKDKWRNMSVSAS 61


>ref|XP_002308277.1| single myb histone [Populus trichocarpa]
           gi|222854253|gb|EEE91800.1| single myb histone [Populus
           trichocarpa]
          Length = 275

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +3

Query: 3   GTGKWKNIQKDPEFNHFLYSRSNIDLKDT-KLLQVSAAIRVIRD 131
           GTGKWKNIQ+DPEFN +LYSRSNIDLKD  + + VSA  + ++D
Sbjct: 24  GTGKWKNIQRDPEFNPYLYSRSNIDLKDKWRNMTVSAGSQSVKD 67


>ref|XP_002514135.1| DNA binding protein, putative [Ricinus communis]
           gi|223546591|gb|EEF48089.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 283

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 3   GTGKWKNIQKDPEFNHFLYSRSNIDLKD 86
           GTGKWKNIQKDPEFN FL+SRSNIDLKD
Sbjct: 24  GTGKWKNIQKDPEFNPFLFSRSNIDLKD 51


>ref|XP_002330511.1| single myb histone [Populus trichocarpa]
           gi|222872445|gb|EEF09576.1| single myb histone [Populus
           trichocarpa]
          Length = 279

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/44 (63%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +3

Query: 3   GTGKWKNIQKDPEFNHFLYSRSNIDLKDT-KLLQVSAAIRVIRD 131
           GTGKWKNIQ+DPEFN +L SRSNIDLKD  + + VSA  + ++D
Sbjct: 24  GTGKWKNIQRDPEFNPYLRSRSNIDLKDKWRNMTVSAGSQSVKD 67


>emb|CCA29094.1| putative MYB transcription factor [Rosa rugosa]
           gi|327412629|emb|CCA29103.1| putative MYB transcription
           factor [Rosa rugosa]
          Length = 327

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   GTGKWKNIQKDPEFNHFLYSRSNIDLKD 86
           GTGKWK+IQKDPEFN FL SRSNIDLKD
Sbjct: 24  GTGKWKDIQKDPEFNPFLSSRSNIDLKD 51


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