BLASTX nr result
ID: Atractylodes21_contig00014181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00014181
(1383 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi... 627 e-177
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera] 627 e-177
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi... 612 e-173
ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ... 589 e-166
ref|NP_187294.1| pentatricopeptide repeat-containing protein [Ar... 587 e-165
>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 627 bits (1617), Expect = e-177
Identities = 307/401 (76%), Positives = 345/401 (86%)
Frame = +3
Query: 177 SASSVAAPKKKLWKQGEYPGDVLGNSSFDRKKRRTPIKNIKKKLDRKDNLNPWVNTVTEA 356
S+SS A KK+LWKQGE+PG +S + + R+TPIKNIKKKLDRK++ W NTV EA
Sbjct: 60 SSSSSAVGKKRLWKQGEFPG-----TSAEGRSRKTPIKNIKKKLDRKNDAKAWANTVAEA 114
Query: 357 LSDSINTKQWLRALEVFEMLREQPFYQPKEGTYMKLIVLLGRSGQPQHARKLFNTMIEEG 536
LSD + KQWL+ALEVFEMLREQPFYQPKEGTYMKL+VLLG+SGQP A +LF+TM+EEG
Sbjct: 115 LSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEG 174
Query: 537 XXXXXXXXXXXXXXXCRSNLIDEAFKILEQMKNLPLCQPDVYTFSILIKACVDASRFDLV 716
CRSNLIDEAF IL QMK LP CQPDV+T+S L+KACVDASRF+LV
Sbjct: 175 CEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELV 234
Query: 717 ESLYEQMAERSITPNTVTQNTVLAGYGKVGKFDQMEKVLLGMLDSSTSKPDVWTMNTILS 896
ESLYE+M RSITPNTVTQN VL+GYGK GKFD+MEKVL GML+S++SKPDVWTMNTILS
Sbjct: 235 ESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILS 294
Query: 897 LFGNMGHVETMEQWYEKFRNFGIDPETRTFNILIGAYGKKKMYDKMSTVMEYMRKLSFPW 1076
LFGN G +E ME+WYEKFRNFGI+PETRTFNILIGAYGKK+MYDKMS+VMEYMRKL FPW
Sbjct: 295 LFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
Query: 1077 TTSTYNNVIEAFSDVGDAKNMGYTFDQMRAEGMRADTKTFCCLIRGYANAGLFHKVISVV 1256
TTSTYNNVIEAFSDVGDAKNM YTFDQMRAEGM+ADTKTFCCLIRGYANAGLFHKV+S V
Sbjct: 355 TTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSV 414
Query: 1257 ELAGKLEIPENTSFHNAVIYACAKADDLMEMERVFKRMKEK 1379
+LAGK EIPENTSF+NAVI ACAKA+DL+EMERVF RMK+K
Sbjct: 415 QLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDK 455
>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 627 bits (1617), Expect = e-177
Identities = 307/401 (76%), Positives = 345/401 (86%)
Frame = +3
Query: 177 SASSVAAPKKKLWKQGEYPGDVLGNSSFDRKKRRTPIKNIKKKLDRKDNLNPWVNTVTEA 356
S+SS A KK+LWKQGE+PG +S + + R+TPIKNIKKKLDRK++ W NTV EA
Sbjct: 60 SSSSSAVGKKRLWKQGEFPG-----TSAEGRSRKTPIKNIKKKLDRKNDAKAWANTVAEA 114
Query: 357 LSDSINTKQWLRALEVFEMLREQPFYQPKEGTYMKLIVLLGRSGQPQHARKLFNTMIEEG 536
LSD + KQWL+ALEVFEMLREQPFYQPKEGTYMKL+VLLG+SGQP A +LF+TM+EEG
Sbjct: 115 LSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEG 174
Query: 537 XXXXXXXXXXXXXXXCRSNLIDEAFKILEQMKNLPLCQPDVYTFSILIKACVDASRFDLV 716
CRSNLIDEAF IL QMK LP CQPDV+T+S L+KACVDASRF+LV
Sbjct: 175 CEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELV 234
Query: 717 ESLYEQMAERSITPNTVTQNTVLAGYGKVGKFDQMEKVLLGMLDSSTSKPDVWTMNTILS 896
ESLYE+M RSITPNTVTQN VL+GYGK GKFD+MEKVL GML+S++SKPDVWTMNTILS
Sbjct: 235 ESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILS 294
Query: 897 LFGNMGHVETMEQWYEKFRNFGIDPETRTFNILIGAYGKKKMYDKMSTVMEYMRKLSFPW 1076
LFGN G +E ME+WYEKFRNFGI+PETRTFNILIGAYGKK+MYDKMS+VMEYMRKL FPW
Sbjct: 295 LFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
Query: 1077 TTSTYNNVIEAFSDVGDAKNMGYTFDQMRAEGMRADTKTFCCLIRGYANAGLFHKVISVV 1256
TTSTYNNVIEAFSDVGDAKNM YTFDQMRAEGM+ADTKTFCCLIRGYANAGLFHKV+S V
Sbjct: 355 TTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSV 414
Query: 1257 ELAGKLEIPENTSFHNAVIYACAKADDLMEMERVFKRMKEK 1379
+LAGK EIPENTSF+NAVI ACAKA+DL+EMERVF RMK+K
Sbjct: 415 QLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDK 455
>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
gi|449522692|ref|XP_004168360.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
Length = 496
Score = 612 bits (1579), Expect = e-173
Identities = 298/408 (73%), Positives = 343/408 (84%)
Frame = +3
Query: 156 PFRCAIRSASSVAAPKKKLWKQGEYPGDVLGNSSFDRKKRRTPIKNIKKKLDRKDNLNPW 335
P R + ++S + KK+ WKQGE+PG ++ +RR P+K +KKKLDRK+N W
Sbjct: 51 PTRKSPVPSTSSSPAKKRHWKQGEFPGTTETST-----RRRAPLKRVKKKLDRKNNAKAW 105
Query: 336 VNTVTEALSDSINTKQWLRALEVFEMLREQPFYQPKEGTYMKLIVLLGRSGQPQHARKLF 515
NTVTEALSD I K+WL+ALEVFEMLREQPFY+PKEGTYMKL+VLLGRSGQP AR LF
Sbjct: 106 ANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLF 165
Query: 516 NTMIEEGXXXXXXXXXXXXXXXCRSNLIDEAFKILEQMKNLPLCQPDVYTFSILIKACVD 695
+TM++E CR+NLID+AF L MK LP CQPDVYT+SILIKACVD
Sbjct: 166 DTMVQERCEPTPELYTALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVD 225
Query: 696 ASRFDLVESLYEQMAERSITPNTVTQNTVLAGYGKVGKFDQMEKVLLGMLDSSTSKPDVW 875
SRF++VESLYE+MAER ITPNTVTQN VL+GYGK+GK+DQMEKVL+GML+S+T +PDVW
Sbjct: 226 DSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVW 285
Query: 876 TMNTILSLFGNMGHVETMEQWYEKFRNFGIDPETRTFNILIGAYGKKKMYDKMSTVMEYM 1055
TMN ILS+FGN GH+E ME+WYEKFRNFGI+PETRTFNILIGAYGKK+MYDKMS+VMEYM
Sbjct: 286 TMNIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYM 345
Query: 1056 RKLSFPWTTSTYNNVIEAFSDVGDAKNMGYTFDQMRAEGMRADTKTFCCLIRGYANAGLF 1235
RKL FPWTTSTYNNVIEAF+DVGDAKNM YTF+QMRAEGMRADTKTFCCLI GYANAGLF
Sbjct: 346 RKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLF 405
Query: 1236 HKVISVVELAGKLEIPENTSFHNAVIYACAKADDLMEMERVFKRMKEK 1379
HKVI V+LAGKLEIPENTSF+NAVI ACAKA+DLMEM+RVFKRMK+K
Sbjct: 406 HKVIGSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDK 453
>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510921|gb|AES92063.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 496
Score = 589 bits (1518), Expect = e-166
Identities = 285/402 (70%), Positives = 332/402 (82%)
Frame = +3
Query: 177 SASSVAAPKKKLWKQGEYPGDVLGNSSFDRKKRRTPIKNIKKKLDRKDNLNPWVNTVTEA 356
SAS+ + KKK WKQGE+PG + +S RR PIKN+KKKLDRK+N W NTVTEA
Sbjct: 51 SASNSSVVKKKHWKQGEFPG--VSETSLPSSTRRKPIKNVKKKLDRKNNAKAWANTVTEA 108
Query: 357 LSDSINTKQWLRALEVFEMLREQPFYQPKEGTYMKLIVLLGRSGQPQHARKLFNTMIEEG 536
LS+ I+ KQWL+ALE +MLREQ FYQP+EGTYMKLIVLLG+SGQPQ A +LF MIEEG
Sbjct: 109 LSECIDKKQWLQALETLDMLREQSFYQPREGTYMKLIVLLGKSGQPQRAHQLFTAMIEEG 168
Query: 537 XXXXXXXXXXXXXXXCRSNLIDEAFKILEQMKNLPLCQPDVYTFSILIKACVDASRFDLV 716
CRSN+IDEA IL++MKN PLCQPDV+T+S LIKACVD +F+L+
Sbjct: 169 CDPTPELYTALLAAYCRSNMIDEALSILDEMKNHPLCQPDVFTYSTLIKACVDIFKFELI 228
Query: 717 ESLYEQMAERSITPNTVTQNTVLAGYGKVGKFDQMEKVLLGMLDSSTSKPDVWTMNTILS 896
E LYE+MA+RSI PNTVTQN VL GYGK G FDQMEKVL GML S+ KPDVWTMNTI+
Sbjct: 229 ELLYEEMAQRSIMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKPDVWTMNTIIG 288
Query: 897 LFGNMGHVETMEQWYEKFRNFGIDPETRTFNILIGAYGKKKMYDKMSTVMEYMRKLSFPW 1076
+FGNMG ++ ME+WYEKFRNFGI+PETRTFNILIG+YGKK+MYDKMS+VMEYMRKL FPW
Sbjct: 289 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQFPW 348
Query: 1077 TTSTYNNVIEAFSDVGDAKNMGYTFDQMRAEGMRADTKTFCCLIRGYANAGLFHKVISVV 1256
TTSTYNNVIEAF++ GDAKNM YTF+QMR+EGMRADTKTFCCLI+G+ANAGLFHKVIS V
Sbjct: 349 TTSTYNNVIEAFAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANAGLFHKVISSV 408
Query: 1257 ELAGKLEIPENTSFHNAVIYACAKADDLMEMERVFKRMKEKQ 1382
+LA KLEIP NT+F+NAV+ ACAKA+DLMEM+RVF RMK+ Q
Sbjct: 409 QLAAKLEIPLNTAFYNAVLSACAKAEDLMEMDRVFMRMKDTQ 450
>ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein
[Arabidopsis thaliana] gi|20466300|gb|AAM20467.1| unknown
protein [Arabidopsis thaliana] gi|30387593|gb|AAP31962.1|
At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 587 bits (1514), Expect = e-165
Identities = 288/409 (70%), Positives = 337/409 (82%), Gaps = 2/409 (0%)
Frame = +3
Query: 162 RCAIRSASSV--AAPKKKLWKQGEYPGDVLGNSSFDRKKRRTPIKNIKKKLDRKDNLNPW 335
RC + ++ S + KK+LWK GE+PG + +RRTPIKN+KKKLDR+ N W
Sbjct: 33 RCVLAASKSSPGSVTKKRLWKDGEFPG-----ITEPVNQRRTPIKNVKKKLDRRSKANGW 87
Query: 336 VNTVTEALSDSINTKQWLRALEVFEMLREQPFYQPKEGTYMKLIVLLGRSGQPQHARKLF 515
VNTVTE LSD I KQWL+ALEVF+MLREQ FYQPKEGTYMKL+VLLG+SGQP A+KLF
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 516 NTMIEEGXXXXXXXXXXXXXXXCRSNLIDEAFKILEQMKNLPLCQPDVYTFSILIKACVD 695
+ M+EEG RSNLID+AF IL++MK+ P CQPDV+T+S L+KACVD
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 696 ASRFDLVESLYEQMAERSITPNTVTQNTVLAGYGKVGKFDQMEKVLLGMLDSSTSKPDVW 875
AS+FDLV+SLY++M ER ITPNTVTQN VL+GYG+VG+FDQMEKVL ML S+ KPDVW
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVW 267
Query: 876 TMNTILSLFGNMGHVETMEQWYEKFRNFGIDPETRTFNILIGAYGKKKMYDKMSTVMEYM 1055
TMN ILS+FGNMG ++ ME WYEKFRNFGI+PETRTFNILIG+YGKK+MYDKMS+VMEYM
Sbjct: 268 TMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Query: 1056 RKLSFPWTTSTYNNVIEAFSDVGDAKNMGYTFDQMRAEGMRADTKTFCCLIRGYANAGLF 1235
RKL FPWTTSTYNN+IEAF+DVGDAKNM TFDQMR+EGM+ADTKTFCCLI GYANAGLF
Sbjct: 328 RKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLF 387
Query: 1236 HKVISVVELAGKLEIPENTSFHNAVIYACAKADDLMEMERVFKRMKEKQ 1382
HKVIS V+LA K EIPENT+F+NAVI ACAKADDL+EMERV+ RMKE+Q
Sbjct: 388 HKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQ 436