BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014043
         (1326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial...   321   2e-85
emb|CBI15323.3| unnamed protein product [Vitis vinifera]              317   3e-84
ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata ...   281   2e-73
ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]...   281   3e-73
ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71

>ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera]
          Length = 333

 Score =  321 bits (823), Expect = 2e-85
 Identities = 175/317 (55%), Positives = 220/317 (69%), Gaps = 9/317 (2%)
 Frame = -3

Query: 1174 MQKLFSIKIISKTPRKIASQTLPSNPLPLHRATDVPQXXXXHGFSHFATS--------PQ 1019
            MQ+L S+K+ S   R++   T PS+ L  H               H  T+        P 
Sbjct: 1    MQRLISLKVASDISRRVF--TKPSSLLHSHPNKTFFSLSQPSPTHHLHTTSLIPPPHFPW 58

Query: 1018 PLQQAPTNCLMKVLSNPVPLKRVLPNALLKLKFPSKFLVDHGEFGFLRAQFTRQSFQFSQ 839
            P     +  +   +SNP  LK+ LP ALLK    S   +     GFLRAQF R+SF FS 
Sbjct: 59   PSHHGLSRSVYGFISNPTLLKQFLPTALLK---GSSKTLAASRVGFLRAQFPRRSFGFSP 115

Query: 838  PI-SYQKTWQSQFRRRLTTDGVVIGLIVTNVAVFLLWRVADRKFMMQNFMIQLDNFKSGR 662
               SY + W+S +   L+T+ VV+GLI+ NVAVF+LWR++D +FM+ NF I LDNFKSGR
Sbjct: 116  SFDSYGRRWRS-WLSGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGR 174

Query: 661  FHTMITSAFSHIEVGHIVSNMIGLYFFGKSIGQNFGPEFLLKLYLAGAFVGSAFFLVHHA 482
             HT+ITSAFSHI++GH++SNMIGLYFFG +IG+ FGPEFLLKLYLAGA VGS F+LVHHA
Sbjct: 175  IHTLITSAFSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHA 234

Query: 481  FLASSSKERRMFGSDPSKVPGLGASGAVNAIMLLDIFLFPAKTIYLEFIIPVPAILLGMF 302
            F+A SSK ++M+  +PS +PGLGASGAVNAIMLLDIFLFP  T+YLEF IPVPAILLG+F
Sbjct: 235  FMAPSSKGQQMWSINPSAIPGLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIF 294

Query: 301  LVGHDMMRILEGNSQIS 251
            L+G DM+RI+EG+ QIS
Sbjct: 295  LIGKDMLRIIEGDDQIS 311


>emb|CBI15323.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  317 bits (813), Expect = 3e-84
 Identities = 173/315 (54%), Positives = 218/315 (69%), Gaps = 9/315 (2%)
 Frame = -3

Query: 1168 KLFSIKIISKTPRKIASQTLPSNPLPLHRATDVPQXXXXHGFSHFATS--------PQPL 1013
            +L S+K+ S   R++   T PS+ L  H               H  T+        P P 
Sbjct: 32   RLISLKVASDISRRVF--TKPSSLLHSHPNKTFFSLSQPSPTHHLHTTSLIPPPHFPWPS 89

Query: 1012 QQAPTNCLMKVLSNPVPLKRVLPNALLKLKFPSKFLVDHGEFGFLRAQFTRQSFQFSQPI 833
                +  +   +SNP  LK+ LP ALLK    S   +     GFLRAQF R+SF FS   
Sbjct: 90   HHGLSRSVYGFISNPTLLKQFLPTALLK---GSSKTLAASRVGFLRAQFPRRSFGFSPSF 146

Query: 832  -SYQKTWQSQFRRRLTTDGVVIGLIVTNVAVFLLWRVADRKFMMQNFMIQLDNFKSGRFH 656
             SY + W+S +   L+T+ VV+GLI+ NVAVF+LWR++D +FM+ NF I LDNFKSGR H
Sbjct: 147  DSYGRRWRS-WLSGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIH 205

Query: 655  TMITSAFSHIEVGHIVSNMIGLYFFGKSIGQNFGPEFLLKLYLAGAFVGSAFFLVHHAFL 476
            T+ITSAFSHI++GH++SNMIGLYFFG +IG+ FGPEFLLKLYLAGA VGS F+LVHHAF+
Sbjct: 206  TLITSAFSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFM 265

Query: 475  ASSSKERRMFGSDPSKVPGLGASGAVNAIMLLDIFLFPAKTIYLEFIIPVPAILLGMFLV 296
            A SSK ++M+  +PS +PGLGASGAVNAIMLLDIFLFP  T+YLEF IPVPAILLG+FL+
Sbjct: 266  APSSKGQQMWSINPSAIPGLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIFLI 325

Query: 295  GHDMMRILEGNSQIS 251
            G DM+RI+EG+ QIS
Sbjct: 326  GKDMLRIIEGDDQIS 340


>ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336130|gb|EFH66547.1| rhomboid family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score =  281 bits (720), Expect = 2e-73
 Identities = 139/236 (58%), Positives = 179/236 (75%), Gaps = 1/236 (0%)
 Frame = -3

Query: 886 GFLRAQFTRQSFQFSQPISYQKTWQSQFRRRLTTDGVVIGLIVTNVAVFLLWRVADRKFM 707
           GF+ +QF ++ F+F +   +Q+     + + L+   VV+GL++ N  VF++WRV +++FM
Sbjct: 99  GFIGSQFPKKGFEFERFSGFQRRGWKHWLQGLSDRDVVLGLVIANTGVFMMWRVFNQQFM 158

Query: 706 MQNFMIQLDNFKSGRFHTMITSAFSHIEVGHIVSNMIGLYFFGKSIGQNFGPEFLLKLYL 527
           M+NFMI LDNF SGR HT+ITSAFSHI++GHIVSNMIGLYFFG SI +NFGP+FLLKLYL
Sbjct: 159 MKNFMISLDNFTSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYL 218

Query: 526 AGAFVGSAFFLVHHAFLASSS-KERRMFGSDPSKVPGLGASGAVNAIMLLDIFLFPAKTI 350
           AGA  GS F+L+HHA++A++S K +  F  DPS+ PGLGASGAVNAIMLLDIFL P  T+
Sbjct: 219 AGALGGSVFYLIHHAYMATTSPKGQGAFMRDPSRTPGLGASGAVNAIMLLDIFLHPTATL 278

Query: 349 YLEFIIPVPAILLGMFLVGHDMMRILEGNSQISXXXXXXXXXXXXXXXARLRKGRF 182
           YLEFIIPVPA+LLG+FL+G D++RI EGNS IS               AR+RKGRF
Sbjct: 279 YLEFIIPVPAMLLGIFLIGKDILRITEGNSNISGSAHLGGAAVAAIAWARIRKGRF 334


>ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]
           gi|9795596|gb|AAF98414.1|AC026238_6 Hypothetical protein
           [Arabidopsis thaliana]
           gi|13877607|gb|AAK43881.1|AF370504_1 Unknown protein
           [Arabidopsis thaliana] gi|20148713|gb|AAM10247.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592397|gb|AAM64348.1| unknown [Arabidopsis
           thaliana] gi|332191612|gb|AEE29733.1| RHOMBOID-like
           protein 12 [Arabidopsis thaliana]
          Length = 336

 Score =  281 bits (719), Expect = 3e-73
 Identities = 139/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
 Frame = -3

Query: 886 GFLRAQFTRQSFQFSQPISYQKTWQSQFRRRLTTDGVVIGLIVTNVAVFLLWRVADRKFM 707
           GF+ +QF ++ F+F +   +Q+     + + L+   VV+GL++ N  VF++WRV +++FM
Sbjct: 99  GFIGSQFPKKGFEFQRFSGFQRRGWKHWLQGLSDRDVVLGLVIANAGVFVMWRVFNQQFM 158

Query: 706 MQNFMIQLDNFKSGRFHTMITSAFSHIEVGHIVSNMIGLYFFGKSIGQNFGPEFLLKLYL 527
           M NFMI LDNFKSGR HT+ITSAFSHI++GHIVSNMIGLYFFG SI +NFGP+FLLKLYL
Sbjct: 159 MNNFMISLDNFKSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYL 218

Query: 526 AGAFVGSAFFLVHHAFLASSS-KERRMFGSDPSKVPGLGASGAVNAIMLLDIFLFPAKTI 350
           AGA  GS F+L+HHA++A++S K +  F  DPS+ PGLGASGAVNAIMLLDIFL P  T+
Sbjct: 219 AGALGGSVFYLIHHAYMAATSPKGQGAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATL 278

Query: 349 YLEFIIPVPAILLGMFLVGHDMMRILEGNSQISXXXXXXXXXXXXXXXARLRKGRF 182
           YLEF IPVPA+LLG+FL+G D++RI EGNS IS               AR+RKGRF
Sbjct: 279 YLEFFIPVPAMLLGIFLIGKDILRITEGNSNISGSAHLGGAAVAAIAWARIRKGRF 334


>ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|222855471|gb|EEE93018.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  275 bits (702), Expect = 2e-71
 Identities = 138/236 (58%), Positives = 175/236 (74%), Gaps = 1/236 (0%)
 Frame = -3

Query: 886 GFLRAQFTR-QSFQFSQPISYQKTWQSQFRRRLTTDGVVIGLIVTNVAVFLLWRVADRKF 710
           GF  A+F R  S+      S ++ W+S F R L+ D VV+GLI+ N AVF+LWR+ D+KF
Sbjct: 8   GFFIARFARGYSWSNLSLGSNRRGWRSWFNR-LSADNVVLGLIIANAAVFMLWRIEDQKF 66

Query: 709 MMQNFMIQLDNFKSGRFHTMITSAFSHIEVGHIVSNMIGLYFFGKSIGQNFGPEFLLKLY 530
           MM+NFMI LDNF+SGR HT++TSAFSHI++GHI  NMIGLYFFG +I + FGPEFLLKLY
Sbjct: 67  MMENFMISLDNFRSGRIHTLVTSAFSHIDIGHIAFNMIGLYFFGTNIARTFGPEFLLKLY 126

Query: 529 LAGAFVGSAFFLVHHAFLASSSKERRMFGSDPSKVPGLGASGAVNAIMLLDIFLFPAKTI 350
           LAGA  GS F+L+HH ++  SSK + M+  D S+ PGLGASGAVNAIMLLDIFL P  T+
Sbjct: 127 LAGAIGGSVFYLLHHGYMDLSSKGQGMWARDSSRTPGLGASGAVNAIMLLDIFLNPRATL 186

Query: 349 YLEFIIPVPAILLGMFLVGHDMMRILEGNSQISXXXXXXXXXXXXXXXARLRKGRF 182
           Y +FIIPVPAILLG+FL+G D++R++EGNS IS               AR+++GRF
Sbjct: 187 YFDFIIPVPAILLGIFLIGKDLLRVMEGNSNISGSAHLGGAAVAAIAWARIKRGRF 242