BLASTX nr result

ID: Atractylodes21_contig00014040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00014040
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geran...   497   e-138
gb|AAQ08894.1| farnesyltransferase/type I geranylgeranyltransfer...   488   e-135
ref|XP_002534116.1| protein farnesyltransferase alpha subunit, p...   474   e-131
ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128
ref|NP_001233963.1| protein farnesyltransferase/geranylgeranyltr...   464   e-128

>ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geranylgeranyltransferase
            type-1 subunit alpha [Vitis vinifera]
            gi|297743768|emb|CBI36651.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  497 bits (1279), Expect = e-138
 Identities = 236/327 (72%), Positives = 272/327 (83%), Gaps = 1/327 (0%)
 Frame = +1

Query: 49   DEDERIPLSQRPEWSDVTPVPQDDGPNPVVPISYSEEFAETMGYFRAVYLADERSLRALQ 228
            +E E  PLSQRPEWSDVTPVPQDDGPNPVVPI+Y ++F ETM YFRAVY ADERSLR+L 
Sbjct: 5    EEGEERPLSQRPEWSDVTPVPQDDGPNPVVPIAYKDDFTETMDYFRAVYFADERSLRSLH 64

Query: 229  LTAEAIHFNAGNYTVWQFRRLILEALNADLHDELEFVEHLASKNSKNYQLWHHRRWVAEK 408
            +TAEAIH NAGNYTVW FRRLIL ALNADLH+EL F++ +A+ N KNYQ+WHHRRWVAEK
Sbjct: 65   VTAEAIHMNAGNYTVWHFRRLILGALNADLHEELNFIKKVANGNPKNYQIWHHRRWVAEK 124

Query: 409  LGTEAAARELDFTKKIFINDAKNYHAWSHRQWVLQTLGGWEDELAYCDKLLEDDIFNNSA 588
            LG++A ++ELDFTKKI   DAKNYHAWSHRQWVLQ LGGWEDEL YC +LLEDDIFNNSA
Sbjct: 125  LGSDATSKELDFTKKILSLDAKNYHAWSHRQWVLQELGGWEDELDYCKQLLEDDIFNNSA 184

Query: 589  WNQRYFVITRHPGLGGIEATRDSEVSYAVKAIVTKPENESPWRYLRGLYKNRMQSFATDP 768
            WNQRYFVIT+ P LGG+EA R+SEV+Y V AI+ KPENESPWRYLRGLYK+  QS+  DP
Sbjct: 185  WNQRYFVITKSPFLGGLEAMRESEVNYTVGAIIAKPENESPWRYLRGLYKDDAQSWVNDP 244

Query: 769  RVSTVCLKVLTAKVNCVFALSLLLDLFSHGFEPSQELKSAVEALLPESID-PDSDMAVTV 945
            +VS+VCL VL+AK N VFALS LLDL  HGF+PSQ+  +AV+AL    +D  DS++A  V
Sbjct: 245  QVSSVCLTVLSAKRNTVFALSTLLDLLCHGFQPSQDFINAVDALKTPDLDQSDSNLATAV 304

Query: 946  CSVLEVMDPMRVNYWRWRKRSVHSQVA 1026
            CSVL  MDPMRVNYW WRK  + +Q A
Sbjct: 305  CSVLGHMDPMRVNYWAWRKNKLPAQTA 331


>gb|AAQ08894.1| farnesyltransferase/type I geranylgeranyltransferase alpha subunit
            [Catharanthus roseus]
          Length = 332

 Score =  488 bits (1256), Expect = e-135
 Identities = 232/329 (70%), Positives = 275/329 (83%), Gaps = 3/329 (0%)
 Frame = +1

Query: 40   MDSDE---DERIPLSQRPEWSDVTPVPQDDGPNPVVPISYSEEFAETMGYFRAVYLADER 210
            MD DE    +RIPLS+RPEW+DVTPVPQ+DGP PVVPISYS+EF+ETM YFRA+YLADER
Sbjct: 1    MDPDELKQGKRIPLSKRPEWADVTPVPQNDGPKPVVPISYSDEFSETMNYFRAIYLADER 60

Query: 211  SLRALQLTAEAIHFNAGNYTVWQFRRLILEALNADLHDELEFVEHLASKNSKNYQLWHHR 390
            S RALQLTAEAI  N GNYTVWQFRR ILEALNA+L +ELE++  +A  N+KNYQ+WHHR
Sbjct: 61   SSRALQLTAEAIKHNPGNYTVWQFRRRILEALNANLQEELEYLGSIAEGNTKNYQIWHHR 120

Query: 391  RWVAEKLGTEAAARELDFTKKIFINDAKNYHAWSHRQWVLQTLGGWEDELAYCDKLLEDD 570
            RWVAEKLG++A ++EL+FTKKIF+ DAKNYHAWSHRQWVLQ LGGWEDELAYC KLLE+D
Sbjct: 121  RWVAEKLGSDARSKELEFTKKIFMEDAKNYHAWSHRQWVLQALGGWEDELAYCHKLLEED 180

Query: 571  IFNNSAWNQRYFVITRHPGLGGIEATRDSEVSYAVKAIVTKPENESPWRYLRGLYKNRMQ 750
            IFNNSAWNQRYFV+TR P  GGIEA R+SEVSYAVKAI++ P NESPWRYLRGLY    Q
Sbjct: 181  IFNNSAWNQRYFVLTRSPLHGGIEAMRESEVSYAVKAIISDPGNESPWRYLRGLYGKDTQ 240

Query: 751  SFATDPRVSTVCLKVLTAKVNCVFALSLLLDLFSHGFEPSQELKSAVEALLPESIDPDSD 930
            S + DP+V +VCL+VL +K N V AL++LLDL  HG  PSQEL+ AV AL P+S   DSD
Sbjct: 241  SLSKDPQVVSVCLEVLASKSNFVHALNMLLDLLFHGLRPSQELRDAVSALNPDSGTSDSD 300

Query: 931  MAVTVCSVLEVMDPMRVNYWRWRKRSVHS 1017
            +A+T+C +LE  DP+R NYW+WR+  V++
Sbjct: 301  LAITICIILERDDPIRQNYWKWRRNRVNN 329


>ref|XP_002534116.1| protein farnesyltransferase alpha subunit, putative [Ricinus
            communis] gi|223525828|gb|EEF28267.1| protein
            farnesyltransferase alpha subunit, putative [Ricinus
            communis]
          Length = 333

 Score =  474 bits (1220), Expect = e-131
 Identities = 222/326 (68%), Positives = 268/326 (82%), Gaps = 5/326 (1%)
 Frame = +1

Query: 40   MDSDED----ERIPLSQRPEWSDVTPVPQDDGPNPVVPISYSEEFAETMGYFRAVYLADE 207
            MDSD+D    E +PLSQRPEWSDV PV QDDGPNPVVPI+Y  EF ETM YFRA+YL+DE
Sbjct: 1    MDSDDDLRPEETVPLSQRPEWSDVIPVQQDDGPNPVVPIAYKPEFEETMNYFRAIYLSDE 60

Query: 208  RSLRALQLTAEAIHFNAGNYTVWQFRRLILEALNADLHDELEFVEHLASKNSKNYQLWHH 387
            RS RALQLT   I  N GNYTVW FRRL+LEALNA+L++EL+++E +A KN+KNYQ+WHH
Sbjct: 61   RSPRALQLTHLVILLNPGNYTVWHFRRLVLEALNAELYEELDYIERVAKKNTKNYQIWHH 120

Query: 388  RRWVAEKLGTEAAARELDFTKKIFINDAKNYHAWSHRQWVLQTLGGWEDELAYCDKLLED 567
            RRWVAEKLGT+AAA+EL FT+KI   DAKNYHAWSHRQWVLQ LGGWEDEL YC +LLE 
Sbjct: 121  RRWVAEKLGTDAAAKELQFTRKILSLDAKNYHAWSHRQWVLQALGGWEDELDYCRQLLEH 180

Query: 568  DIFNNSAWNQRYFVITRHPGLGGIEATRDSEVSYAVKAIVTKPENESPWRYLRGLYKNRM 747
            D+FNNSAWNQRYF+ITR P LGG++A R+SE+ + V+AI+  PENESPWRYLRGLY+   
Sbjct: 181  DVFNNSAWNQRYFIITRSPLLGGLKAVRESEMKFTVEAILANPENESPWRYLRGLYQGDT 240

Query: 748  QSFATDPRVSTVCLKVLTAKVNCVFALSLLLDLFSHGFEPSQELKSAVEALLPESID-PD 924
            QS+  DP+VS+VCLKVL+AK N +FALS+LLDL  HGF+ +QE++ +V+AL   + D P+
Sbjct: 241  QSWINDPQVSSVCLKVLSAKTNHIFALSMLLDLLCHGFQANQEIRDSVDALRTSNCDPPE 300

Query: 925  SDMAVTVCSVLEVMDPMRVNYWRWRK 1002
             D+A  VCS+LE +DPMR NYW WRK
Sbjct: 301  PDLAKAVCSLLEHVDPMRANYWIWRK 326


>ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|222853343|gb|EEE90890.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  465 bits (1196), Expect = e-128
 Identities = 215/326 (65%), Positives = 266/326 (81%), Gaps = 1/326 (0%)
 Frame = +1

Query: 52   EDERIPLSQRPEWSDVTPVPQDDGPNPVVPISYSEEFAETMGYFRAVYLADERSLRALQL 231
            E+ ++ LSQ PEW+DVTP+PQDDGPNPVVPI Y  +F ETMGYFRAVY A+E S RALQL
Sbjct: 4    EEHKLRLSQDPEWADVTPIPQDDGPNPVVPIDYKPDFIETMGYFRAVYKANEFSPRALQL 63

Query: 232  TAEAIHFNAGNYTVWQFRRLILEALNADLHDELEFVEHLASKNSKNYQLWHHRRWVAEKL 411
            T +AI  N GNYTVW FRRLIL+AL  DL++EL F+  ++  N KNYQ+WHHRRW+AEKL
Sbjct: 64   THQAILLNPGNYTVWHFRRLILDALGIDLNEELNFMSGISESNPKNYQIWHHRRWIAEKL 123

Query: 412  GTEAAARELDFTKKIFINDAKNYHAWSHRQWVLQTLGGWEDELAYCDKLLEDDIFNNSAW 591
            GT+AA++EL+FT+++   DAKNYHAWSHRQWVLQ LGGWE+EL YC +LLE D+FNNSAW
Sbjct: 124  GTDAASKELEFTRRMLSLDAKNYHAWSHRQWVLQALGGWENELDYCHQLLEKDVFNNSAW 183

Query: 592  NQRYFVITRHPGLGGIEATRDSEVSYAVKAIVTKPENESPWRYLRGLYKNRMQSFATDPR 771
            NQRYFV+TR P LGG+EATR+SEV Y ++ I+  P NESPWRYLRGLYKN  +S+ +DP+
Sbjct: 184  NQRYFVVTRSPFLGGLEATRESEVKYTIETILGNPGNESPWRYLRGLYKNDPKSWISDPQ 243

Query: 772  VSTVCLKVLTAKVNCVFALSLLLDLFSHGFEPSQELKSAVEALLPESIDP-DSDMAVTVC 948
            VS+VCLKVL+A+ N VFALS LLDL SHGF+ +QE + AV++L P + DP DSD+A T+C
Sbjct: 244  VSSVCLKVLSAEANHVFALSTLLDLLSHGFQANQEFRDAVDSLRPSNSDPADSDIAKTIC 303

Query: 949  SVLEVMDPMRVNYWRWRKRSVHSQVA 1026
            S+L  +DPMRVNYW WRK  + S V+
Sbjct: 304  SILRHVDPMRVNYWTWRKSKLPSSVS 329


>ref|NP_001233963.1| protein farnesyltransferase/geranylgeranyltransferase type-1 subunit
            alpha [Solanum lycopersicum]
            gi|12230437|sp|P93227.1|FNTA_SOLLC RecName: Full=Protein
            farnesyltransferase/geranylgeranyltransferase type-1
            subunit alpha; AltName: Full=CAAX farnesyltransferase
            subunit alpha; AltName: Full=FTase-alpha; AltName:
            Full=Ras proteins prenyltransferase subunit alpha;
            AltName: Full=Type I protein geranyl-geranyltransferase
            subunit alpha; Short=GGTase-I-alpha
            gi|1815666|gb|AAC49665.1| farnesyl protein transferase
            subunit A [Solanum lycopersicum]
          Length = 346

 Score =  464 bits (1193), Expect = e-128
 Identities = 224/344 (65%), Positives = 264/344 (76%), Gaps = 7/344 (2%)
 Frame = +1

Query: 40   MDSDE--DERIPLSQRPEWSDVTPVPQDDGPNPVVPISYSEEFAETMGYFRAVYLADERS 213
            MDS E    RIP  +RP+W+DV PVPQDDGP PVVPI+Y+E+F+ETM YFRA+Y+ADERS
Sbjct: 1    MDSCEVTKTRIPFKERPDWADVKPVPQDDGPCPVVPIAYTEDFSETMDYFRAIYVADERS 60

Query: 214  LRALQLTAEAIHFNAGNYTVWQFRRLILEALNADLHDELEFVEHLASKNSKNYQLWHHRR 393
             RALQLT EAI  N GNYTVWQFRR++LEAL  DL +EL+FV+ +A +N+KNYQ+WHHRR
Sbjct: 61   TRALQLTGEAIQLNPGNYTVWQFRRVVLEALGVDLREELKFVDRIAGENTKNYQIWHHRR 120

Query: 394  WVAEKLGTEAAARELDFTKKIFINDAKNYHAWSHRQWVLQTLGGWEDELAYCDKLLEDDI 573
            W+AEKLG +A   EL+FTKKIF  DAKNYHAWSHRQWVLQ LGGWEDELAYC +LLEDDI
Sbjct: 121  WLAEKLGADAVTNELEFTKKIFSQDAKNYHAWSHRQWVLQALGGWEDELAYCQQLLEDDI 180

Query: 574  FNNSAWNQRYFVITRHPGLGGIEATRDSEVSYAVKAIVTKPENESPWRYLRGLYKNRMQS 753
            +NNSAWNQRYFV+TR P LGG+ A R+ EV+Y V+AI   PENESPWRYLRGLYKN  QS
Sbjct: 181  YNNSAWNQRYFVVTRSPLLGGLVAMRELEVNYTVQAIRASPENESPWRYLRGLYKNDTQS 240

Query: 754  FATDPRVSTVCLKVLTAKVNCVFALSLLLDLFSHGFEPSQELKSAVEALLPESIDPDSDM 933
               D +V++V   VLT++ + V AL  LLDL  H  EPSQELKSAV+ L P+S  PD  +
Sbjct: 241  LVQDSQVASVLWDVLTSQNSHVHALRFLLDLLCHDLEPSQELKSAVDVLTPQSCSPDLAL 300

Query: 934  AVTVCSVLEVMDPMRVNYWRWRKRSV-----HSQVAEGVRNLHV 1050
               +CS+LE  DPMRV YW WRK  V      SQ AE + NL V
Sbjct: 301  TKKICSILEHADPMRVKYWNWRKSMVRVQLLQSQNAERLANLSV 344


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