BLASTX nr result

ID: Atractylodes21_contig00013957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013957
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like...   348   1e-93
ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ric...   336   5e-90
ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|2...   335   7e-90
gb|AFK35756.1| unknown [Lotus japonicus]                              332   1e-88
gb|AAM65980.1| unknown [Arabidopsis thaliana]                         331   2e-88

>ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like [Vitis vinifera]
           gi|297743767|emb|CBI36650.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  348 bits (892), Expect = 1e-93
 Identities = 168/230 (73%), Positives = 197/230 (85%)
 Frame = -2

Query: 864 PSVALFVTVISTKPFLILTLLSSTLVWLISLIVLSGVWRVFLPLKTTAWWPYAILILTSI 685
           PS +LFV+VIS KPFLILT+LSSTL+WLISLIVLSGVWR FLPLKTTAWWPYAILI+TSI
Sbjct: 16  PSFSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGVWRAFLPLKTTAWWPYAILIITSI 75

Query: 684 IFQEGLRLVLWRGYKKLEDILDAFADRVAKPRLYLTDKMQIXXXXXXXXXXXXXVFFCLS 505
            FQEGLR++ W+ YK+LEDILDAFADRV+KPRL+LTDKMQI             VFFCLS
Sbjct: 76  AFQEGLRILFWKVYKRLEDILDAFADRVSKPRLFLTDKMQIALAGGLGHGGAHAVFFCLS 135

Query: 504 LLTPSFGPATFYVDKCSYAPFFLISAIISLAFVTIHTFSMVIAFNGYAKGSKSDQLIVPF 325
           LLTP+FG ATF+VD+CS  PFFLISA+I+LAFVTIHTFSMVIAFNGYA+G+K DQL VP 
Sbjct: 136 LLTPAFGRATFFVDRCSRIPFFLISALIALAFVTIHTFSMVIAFNGYAEGNKVDQLFVPV 195

Query: 324 IHLIAGTLTLVNLASGGCIVGIPLLYMVALSTLAYCANMVWSRLTETQVR 175
           +H++AG +TL+NLASGGC++GIPLLY +A+ T+ +C  MVW RLTETQ R
Sbjct: 196 VHMVAGMVTLINLASGGCVIGIPLLYFLAVLTMMHCGKMVWRRLTETQSR 245


>ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ricinus communis]
           gi|223525827|gb|EEF28266.1| gamma-secretase subunit
           aph-1, putative [Ricinus communis]
          Length = 249

 Score =  336 bits (861), Expect = 5e-90
 Identities = 162/228 (71%), Positives = 191/228 (83%)
 Frame = -2

Query: 864 PSVALFVTVISTKPFLILTLLSSTLVWLISLIVLSGVWRVFLPLKTTAWWPYAILILTSI 685
           PS++LFV+VIS KPFLILTLLSSTL+WLISLIVLSGVWRVFLPLKT  WWPYA+LI+TS+
Sbjct: 16  PSLSLFVSVISKKPFLILTLLSSTLLWLISLIVLSGVWRVFLPLKTKTWWPYALLIVTSV 75

Query: 684 IFQEGLRLVLWRGYKKLEDILDAFADRVAKPRLYLTDKMQIXXXXXXXXXXXXXVFFCLS 505
            FQEGLRL+ W+ YK+LEDILD FAD+++KPRL+LTDKM I             VFFCLS
Sbjct: 76  CFQEGLRLLFWKIYKRLEDILDDFADKLSKPRLFLTDKMLIAMAGGLGHGVAHAVFFCLS 135

Query: 504 LLTPSFGPATFYVDKCSYAPFFLISAIISLAFVTIHTFSMVIAFNGYAKGSKSDQLIVPF 325
           LLTP+FGPATF++D CS  PFFL+SAII+LAFVTIHTFSMVIAFNGYA+G+K DQ+ VP 
Sbjct: 136 LLTPAFGPATFFLDSCSQIPFFLVSAIIALAFVTIHTFSMVIAFNGYAEGNKVDQIFVPV 195

Query: 324 IHLIAGTLTLVNLASGGCIVGIPLLYMVALSTLAYCANMVWSRLTETQ 181
           +HL+AG +TL NLASGGC+VGIPLLY +A+ TL  C  MVW RLTE +
Sbjct: 196 VHLVAGLVTLPNLASGGCVVGIPLLYFIAILTLLQCGKMVWRRLTENR 243


>ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|222852716|gb|EEE90263.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  335 bits (860), Expect = 7e-90
 Identities = 161/228 (70%), Positives = 193/228 (84%)
 Frame = -2

Query: 864 PSVALFVTVISTKPFLILTLLSSTLVWLISLIVLSGVWRVFLPLKTTAWWPYAILILTSI 685
           PS++LF++VIS KPFLILT+LSSTL+WL+SLIVL+GVWR FLPLK+T WWP+AILILTS+
Sbjct: 16  PSLSLFISVISKKPFLILTVLSSTLLWLMSLIVLAGVWRAFLPLKSTTWWPFAILILTSV 75

Query: 684 IFQEGLRLVLWRGYKKLEDILDAFADRVAKPRLYLTDKMQIXXXXXXXXXXXXXVFFCLS 505
            FQEGLR++ W+ YK+LEDILDAFADR+AKPRL+LTDKM I             VFFCLS
Sbjct: 76  SFQEGLRILFWKVYKRLEDILDAFADRLAKPRLFLTDKMLIALAGGLGHGVAHAVFFCLS 135

Query: 504 LLTPSFGPATFYVDKCSYAPFFLISAIISLAFVTIHTFSMVIAFNGYAKGSKSDQLIVPF 325
           LLTP+FGPATF+VDKCS  PFFL+SAII+LAFVTIHT SMVIAFNGYA+G+K DQ  VP 
Sbjct: 136 LLTPAFGPATFFVDKCSQLPFFLVSAIIALAFVTIHTCSMVIAFNGYAEGNKVDQYFVPA 195

Query: 324 IHLIAGTLTLVNLASGGCIVGIPLLYMVALSTLAYCANMVWSRLTETQ 181
           +HL+AG +TLVN ASGGC+VGIPLLY +A+ TL +C  MVW RL+ET+
Sbjct: 196 VHLVAGMVTLVNFASGGCVVGIPLLYFMAILTLLHCGKMVWRRLSETR 243


>gb|AFK35756.1| unknown [Lotus japonicus]
          Length = 249

 Score =  332 bits (850), Expect = 1e-88
 Identities = 158/233 (67%), Positives = 189/233 (81%)
 Frame = -2

Query: 864 PSVALFVTVISTKPFLILTLLSSTLVWLISLIVLSGVWRVFLPLKTTAWWPYAILILTSI 685
           PS+++F++VIS KPFLILT+LSSTL+WLISLIVLSG+WR FLPL TTAWWPYAILIL+SI
Sbjct: 16  PSLSIFISVISKKPFLILTVLSSTLLWLISLIVLSGIWRGFLPLSTTAWWPYAILILSSI 75

Query: 684 IFQEGLRLVLWRGYKKLEDILDAFADRVAKPRLYLTDKMQIXXXXXXXXXXXXXVFFCLS 505
            FQEGLRL  W+ YK+LEDILDAFADRV+KP L+LTDKM I             VFFC+S
Sbjct: 76  AFQEGLRLFFWKIYKRLEDILDAFADRVSKPHLFLTDKMLIALAGGLGHGVAHAVFFCIS 135

Query: 504 LLTPSFGPATFYVDKCSYAPFFLISAIISLAFVTIHTFSMVIAFNGYAKGSKSDQLIVPF 325
           LLTP+FGPAT++VD+CS  PFFL+SA+I LAFVTIHTFSMVIAFNGYA+G+K DQ  VP 
Sbjct: 136 LLTPAFGPATYFVDRCSQVPFFLLSALIGLAFVTIHTFSMVIAFNGYAEGNKVDQYFVPI 195

Query: 324 IHLIAGTLTLVNLASGGCIVGIPLLYMVALSTLAYCANMVWSRLTETQVRVAH 166
           +H +AG +T+VNLA GGC VGIPLLY V   TL +C  M W RLTE  +R+++
Sbjct: 196 VHFVAGAVTMVNLAPGGCTVGIPLLYFVTFLTLIHCGRMAWRRLTENSIRLSN 248


>gb|AAM65980.1| unknown [Arabidopsis thaliana]
          Length = 250

 Score =  331 bits (848), Expect = 2e-88
 Identities = 155/228 (67%), Positives = 190/228 (83%)
 Frame = -2

Query: 864 PSVALFVTVISTKPFLILTLLSSTLVWLISLIVLSGVWRVFLPLKTTAWWPYAILILTSI 685
           PS++LFV+VIS KPFLILT+LSSTL+WL+SLI+LSG+WR FLPLK   WWPYA+L++TS+
Sbjct: 16  PSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLKANVWWPYAVLVITSV 75

Query: 684 IFQEGLRLVLWRGYKKLEDILDAFADRVAKPRLYLTDKMQIXXXXXXXXXXXXXVFFCLS 505
            FQEGLR + W+ YK+LED+LD+FADR+++PRL+LTDK+QI             VFFCLS
Sbjct: 76  CFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAGGLGHGVAHAVFFCLS 135

Query: 504 LLTPSFGPATFYVDKCSYAPFFLISAIISLAFVTIHTFSMVIAFNGYAKGSKSDQLIVPF 325
           LLTP+FGPATFYV++CS  PFFLISAII+LAFVTIHTFSMVIAF GYAKG+K DQ+IVP 
Sbjct: 136 LLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFEGYAKGNKVDQIIVPV 195

Query: 324 IHLIAGTLTLVNLASGGCIVGIPLLYMVALSTLAYCANMVWSRLTETQ 181
           IHL AG LTLVN AS GC++G+PLLY+VA  TL +C  MVW RL E++
Sbjct: 196 IHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLLESR 243


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