BLASTX nr result

ID: Atractylodes21_contig00013949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013949
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related prote...   208   1e-51
sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related prote...   208   1e-51
sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote...   154   2e-35
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   141   1e-31
gb|AFD98848.1| retinoblastoma-related protein 1 [Solanum lycoper...   139   7e-31

>sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
           gi|167593891|gb|ABZ85632.1| retinoblastoma-related
           protein [Hieracium pilosella]
          Length = 1008

 Score =  208 bits (529), Expect = 1e-51
 Identities = 103/143 (72%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
 Frame = +1

Query: 274 MEDFKPLNPTNDSSTENGAT-IEARFRDFCKGRLTMNDNPLEDAMKLFNQSKHLFLTNAS 450
           MED +P+NP  DS TE GAT IEARF DFCKGRLTM+DN LE+AMKLFNQSKHLF+TNAS
Sbjct: 1   MEDLQPINPNTDSPTETGATTIEARFSDFCKGRLTMDDNALEEAMKLFNQSKHLFMTNAS 60

Query: 451 TLGSGTPEEAEHYWFAXXXXXXXXXXXXDAAEDAANTNESGFNLCQILRVARLNFVDFFK 630
            LGSGTPEEAEHYWFA            +  EDAA ++E+ F L QILRVA+LNFVDFFK
Sbjct: 61  ALGSGTPEEAEHYWFAFILFSMKRLSKKNDGEDAAKSSENSFKLYQILRVAKLNFVDFFK 120

Query: 631 ELPQFIVKISPILSNLYGSDWES 699
           ELPQFIVK  PILSNLYGSDWE+
Sbjct: 121 ELPQFIVKTGPILSNLYGSDWET 143


>sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
           gi|167593883|gb|ABZ85628.1| retinoblastoma-related
           protein [Hieracium piloselloides]
          Length = 1005

 Score =  208 bits (529), Expect = 1e-51
 Identities = 104/143 (72%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
 Frame = +1

Query: 274 MEDFKPLNPTNDSSTENGAT-IEARFRDFCKGRLTMNDNPLEDAMKLFNQSKHLFLTNAS 450
           MED +P+NP  DS TE GAT IEARF  FCKGRLTM+DN LE+AMKLFNQSKHLF+TNAS
Sbjct: 1   MEDLQPINPNTDSPTETGATTIEARFSYFCKGRLTMDDNALEEAMKLFNQSKHLFMTNAS 60

Query: 451 TLGSGTPEEAEHYWFAXXXXXXXXXXXXDAAEDAANTNESGFNLCQILRVARLNFVDFFK 630
            LGSGTPEEAEHYWFA            + AEDAA +NE+ F L QILRVA+LNFVDFFK
Sbjct: 61  ALGSGTPEEAEHYWFAFILFSMKRLSKKNDAEDAAKSNENSFKLYQILRVAKLNFVDFFK 120

Query: 631 ELPQFIVKISPILSNLYGSDWES 699
           ELPQFIVK  PILSNLYGSDWE+
Sbjct: 121 ELPQFIVKTGPILSNLYGSDWET 143


>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
           gi|89111303|dbj|BAE80326.1| retinoblastoma related
           protein [Camellia sinensis]
          Length = 1025

 Score =  154 bits (389), Expect = 2e-35
 Identities = 80/147 (54%), Positives = 97/147 (65%), Gaps = 6/147 (4%)
 Frame = +1

Query: 274 MEDF--KPLNPTNDSSTEN----GATIEARFRDFCKGRLTMNDNPLEDAMKLFNQSKHLF 435
           MED   KP  PT D+S  N    G +++ARF  FCK  L++N+N   +AMKLF++SKHL 
Sbjct: 1   MEDHPPKPSIPTADASLSNHGRGGPSLDARFAYFCKTGLSLNENTYTEAMKLFSESKHLL 60

Query: 436 LTNASTLGSGTPEEAEHYWFAXXXXXXXXXXXXDAAEDAANTNESGFNLCQILRVARLNF 615
            T  S +G+GTPEEAE YWFA            +A + +  T   GF LCQILRVA+LN 
Sbjct: 61  STTISAIGTGTPEEAERYWFAFVLYSVKRLSEANADDSSQGTGGDGFTLCQILRVAKLNI 120

Query: 616 VDFFKELPQFIVKISPILSNLYGSDWE 696
           VDFFKELPQFIVK  PILSN YG+DWE
Sbjct: 121 VDFFKELPQFIVKAGPILSNQYGTDWE 147


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
           gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
           Full=Retinoblastoma-related protein
           gi|359392418|gb|AEV45768.1| RBR protein [Vitis
           pseudoreticulata]
          Length = 1007

 Score =  141 bits (355), Expect = 1e-31
 Identities = 70/142 (49%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = +1

Query: 274 MEDFKPLNPTNDSSTENGATIEARFRDFCKGRLTMNDNPLEDAMKLFNQSKHLFLTNA-S 450
           M+  KP+     +S E G  +EARF +FCK  L ++++    AMKLF +S HL  T + S
Sbjct: 1   MDGVKPV-----ASAEQGGAVEARFTEFCKNGLQLDESTFAQAMKLFEESNHLLSTTSLS 55

Query: 451 TLGSGTPEEAEHYWFAXXXXXXXXXXXXDAAEDAANTNESGFNLCQILRVARLNFVDFFK 630
            +G+G PE++E YWFA             A       +E+GFNLCQILRV++LN VDFFK
Sbjct: 56  AIGNGVPEDSERYWFAFILYSVKRLSEGTAENVQQGNDENGFNLCQILRVSKLNIVDFFK 115

Query: 631 ELPQFIVKISPILSNLYGSDWE 696
           ELPQFIVK+ PIL NLYG DWE
Sbjct: 116 ELPQFIVKVGPILGNLYGPDWE 137


>gb|AFD98848.1| retinoblastoma-related protein 1 [Solanum lycopersicum]
          Length = 1018

 Score =  139 bits (349), Expect = 7e-31
 Identities = 70/143 (48%), Positives = 93/143 (65%), Gaps = 2/143 (1%)
 Frame = +1

Query: 274 MEDFKPLNPTNDSSTENGA--TIEARFRDFCKGRLTMNDNPLEDAMKLFNQSKHLFLTNA 447
           ME+ K     + +S ENG+  ++E RF DFCK  L+M ++ + +A KLF  SKHL L+N 
Sbjct: 3   MEELK----NHSNSEENGSVDSLEVRFTDFCKNGLSMGESFMVEARKLFMDSKHLLLSNN 58

Query: 448 STLGSGTPEEAEHYWFAXXXXXXXXXXXXDAAEDAANTNESGFNLCQILRVARLNFVDFF 627
           + +G+ TPEE E YWF             +A   +     +GF+LCQILR A+LN +DFF
Sbjct: 59  AAIGAITPEEVERYWFVFVLFSVKRLSENEARNSSNGNEGNGFDLCQILRGAKLNVLDFF 118

Query: 628 KELPQFIVKISPILSNLYGSDWE 696
           KELPQFIVK+ P+LSNLYGSDWE
Sbjct: 119 KELPQFIVKVGPVLSNLYGSDWE 141


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