BLASTX nr result

ID: Atractylodes21_contig00013941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013941
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis...   108   5e-22
ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus c...   108   6e-22
ref|XP_002319745.1| chromodomain protein [Populus trichocarpa] g...   103   2e-20
ref|XP_002489226.1| hypothetical protein SORBIDRAFT_0012s019770 ...   102   4e-20
ref|XP_002325456.1| chromo domain protein [Populus trichocarpa] ...    98   6e-19

>ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis vinifera]
           gi|296090196|emb|CBI40015.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/75 (66%), Positives = 58/75 (77%)
 Frame = -1

Query: 268 RPKLAEGFYEIEXXXXXXXXXXXVQYLIKWRGWPEAANTWEPVENLMSCSDVIDAFEERM 89
           RPKL +GFYEIE           +QYLIKWRGWPE ANTWEP+ENL +CSDVIDAFE+R+
Sbjct: 88  RPKLDDGFYEIEAIRRRRVRKGQLQYLIKWRGWPENANTWEPLENLQACSDVIDAFEDRL 147

Query: 88  RSGKQRSSRKHKRKN 44
           RS + RSSRK KRK+
Sbjct: 148 RSKRNRSSRKRKRKS 162


>ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus communis]
           gi|223536698|gb|EEF38339.1| Heterochromatin protein,
           putative [Ricinus communis]
          Length = 462

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/77 (70%), Positives = 58/77 (75%)
 Frame = -1

Query: 268 RPKLAEGFYEIEXXXXXXXXXXXVQYLIKWRGWPEAANTWEPVENLMSCSDVIDAFEERM 89
           RPKL EGF+EIE           +QYLIKWRGWPEAANTWEP+ENL SCSDVIDAFEE +
Sbjct: 111 RPKLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPEAANTWEPLENLQSCSDVIDAFEESL 170

Query: 88  RSGKQRSSRKHKRKNAV 38
           RSGK  SSRK KRK  V
Sbjct: 171 RSGK--SSRKRKRKYGV 185


>ref|XP_002319745.1| chromodomain protein [Populus trichocarpa]
           gi|222858121|gb|EEE95668.1| chromodomain protein
           [Populus trichocarpa]
          Length = 438

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/75 (68%), Positives = 56/75 (74%)
 Frame = -1

Query: 268 RPKLAEGFYEIEXXXXXXXXXXXVQYLIKWRGWPEAANTWEPVENLMSCSDVIDAFEERM 89
           R KL EGF+EIE           +QYLIKWRGWPE ANTWEP+ENL SCSDVIDAFEE +
Sbjct: 86  RTKLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSDVIDAFEESL 145

Query: 88  RSGKQRSSRKHKRKN 44
           RSG  RSSRK KRK+
Sbjct: 146 RSG--RSSRKRKRKH 158


>ref|XP_002489226.1| hypothetical protein SORBIDRAFT_0012s019770 [Sorghum bicolor]
           gi|241947086|gb|EES20231.1| hypothetical protein
           SORBIDRAFT_0012s019770 [Sorghum bicolor]
          Length = 383

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/75 (64%), Positives = 56/75 (74%)
 Frame = -1

Query: 265 PKLAEGFYEIEXXXXXXXXXXXVQYLIKWRGWPEAANTWEPVENLMSCSDVIDAFEERMR 86
           PKLAEGFYEIE           +QYL+KWRGWPE+ANTWEP+ENL +CSD++DAF +R R
Sbjct: 62  PKLAEGFYEIEAIRRRRLRRGQLQYLVKWRGWPESANTWEPLENLKACSDIVDAFNKRSR 121

Query: 85  SGKQRSSRKHKRKNA 41
           S   RSSRK KRK A
Sbjct: 122 S--PRSSRKRKRKTA 134


>ref|XP_002325456.1| chromo domain protein [Populus trichocarpa]
           gi|222862331|gb|EEE99837.1| chromo domain protein
           [Populus trichocarpa]
          Length = 435

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/75 (64%), Positives = 55/75 (73%)
 Frame = -1

Query: 268 RPKLAEGFYEIEXXXXXXXXXXXVQYLIKWRGWPEAANTWEPVENLMSCSDVIDAFEERM 89
           R KL EGF+EIE           +QYLIKWRGWPE ANTWEP+ENL SC+DVIDAFEE +
Sbjct: 86  RTKLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCADVIDAFEESL 145

Query: 88  RSGKQRSSRKHKRKN 44
           +SGK  S RK KRK+
Sbjct: 146 QSGK--SFRKRKRKH 158


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