BLASTX nr result

ID: Atractylodes21_contig00013891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013891
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633177.1| PREDICTED: LOW QUALITY PROTEIN: replication ...    54   2e-13
emb|CBI36562.3| unnamed protein product [Vitis vinifera]               54   2e-13
ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-...    52   1e-12
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...    53   2e-12
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...    53   2e-12

>ref|XP_003633177.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
           [Vitis vinifera]
          Length = 448

 Score = 53.9 bits (128), Expect(2) = 2e-13
 Identities = 19/32 (59%), Positives = 28/32 (87%)
 Frame = +2

Query: 26  CNKKVTEAVGFGYCCERCQRNEDECYLKFVII 121
           CNKKVT+A+G GY CE CQ+N+DEC L+++++
Sbjct: 315 CNKKVTDAIGSGYWCEGCQKNDDECSLRYIMV 346



 Score = 47.4 bits (111), Expect(2) = 2e-13
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 157 RYILAAKFFDASGGAWFSIFNDESEKLVGCSA 252
           RYI+  K  DASG AW S+FND++E++ GCSA
Sbjct: 342 RYIMVVKVSDASGEAWLSLFNDQAERIFGCSA 373


>emb|CBI36562.3| unnamed protein product [Vitis vinifera]
          Length = 181

 Score = 53.9 bits (128), Expect(2) = 2e-13
 Identities = 19/32 (59%), Positives = 28/32 (87%)
 Frame = +2

Query: 26  CNKKVTEAVGFGYCCERCQRNEDECYLKFVII 121
           CNKKVT+A+G GY CE CQ+N+DEC L+++++
Sbjct: 48  CNKKVTDAIGSGYWCEGCQKNDDECSLRYIMV 79



 Score = 47.4 bits (111), Expect(2) = 2e-13
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 157 RYILAAKFFDASGGAWFSIFNDESEKLVGCSA 252
           RYI+  K  DASG AW S+FND++E++ GCSA
Sbjct: 75  RYIMVVKVSDASGEAWLSLFNDQAERIFGCSA 106


>ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Brachypodium distachyon]
          Length = 635

 Score = 51.6 bits (122), Expect(2) = 1e-12
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +2

Query: 26  CNKKVTEAVGFGYCCERCQRNEDECYLKFVI 118
           CNKKVTEAVG GY CE CQ+N +EC L++++
Sbjct: 504 CNKKVTEAVGSGYWCEGCQKNYEECMLRYIM 534



 Score = 47.4 bits (111), Expect(2) = 1e-12
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = +1

Query: 157 RYILAAKFFDASGGAWFSIFNDESEKLVGCSA 252
           RYI+A K  D +G AW S+FND++E++VGCSA
Sbjct: 531 RYIMAIKVSDPTGEAWLSLFNDQAERIVGCSA 562


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score = 53.1 bits (126), Expect(2) = 2e-12
 Identities = 18/32 (56%), Positives = 28/32 (87%)
 Frame = +2

Query: 26  CNKKVTEAVGFGYCCERCQRNEDECYLKFVII 121
           CNKKVTEA+G GY C+ CQ+N++EC L+++++
Sbjct: 471 CNKKVTEAIGSGYWCDNCQKNDEECSLRYIMV 502



 Score = 45.1 bits (105), Expect(2) = 2e-12
 Identities = 18/32 (56%), Positives = 25/32 (78%)
 Frame = +1

Query: 157 RYILAAKFFDASGGAWFSIFNDESEKLVGCSA 252
           RYI+  +  DASG AW S FN+E+E+++GCSA
Sbjct: 498 RYIMVVRVSDASGEAWVSTFNEEAERIMGCSA 529


>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score = 53.1 bits (126), Expect(2) = 2e-12
 Identities = 18/32 (56%), Positives = 28/32 (87%)
 Frame = +2

Query: 26  CNKKVTEAVGFGYCCERCQRNEDECYLKFVII 121
           CNKKVTEA+G GY C+ CQ+N++EC L+++++
Sbjct: 428 CNKKVTEAIGSGYWCDNCQKNDEECSLRYIMV 459



 Score = 45.1 bits (105), Expect(2) = 2e-12
 Identities = 18/32 (56%), Positives = 25/32 (78%)
 Frame = +1

Query: 157 RYILAAKFFDASGGAWFSIFNDESEKLVGCSA 252
           RYI+  +  DASG AW S FN+E+E+++GCSA
Sbjct: 455 RYIMVVRVSDASGEAWVSTFNEEAERIMGCSA 486


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