BLASTX nr result

ID: Atractylodes21_contig00013873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013873
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    70   1e-10
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    67   2e-09
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    59   4e-07

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
 Frame = -3

Query: 310 GLNVTLLYRRLSGNEDEDMLVLF---AKISNTTKGLTWIYNPMLVCKPKVGEDALWLSYW 140
           GLN+ ++Y     N D+    L+   A+ISN TK L W YNP++   P++GED LWLS+W
Sbjct: 319 GLNLCIVYGLR--NTDKKCATLYPPDAEISNKTKVLKWSYNPIVYGVPQIGEDMLWLSHW 376

Query: 139 PIG-NILDTGDEVNVSIIVGNGLMVRECGASLQY 41
             G + L+ GD+VNVS  V     V++CG  L Y
Sbjct: 377 RFGTDQLEVGDQVNVSASVTPDFQVKKCGVHLVY 410


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
 Frame = -3

Query: 310  GLNVTLLYRRLSGNEDEDMLVL-----FAKISNTTKGLTWIYNPMLVCKPKVG-EDALWL 149
            GLN+  +Y R     D ++  L     +A+++N TKG  W Y+P     P+   ED LWL
Sbjct: 930  GLNLCTVYAR-----DHEVYWLHAAGHYARMNNETKGTNWSYSPTFYALPEDDDEDMLWL 984

Query: 148  SYWPIGNILDTGDEVNVSIIVGNGLMVRECGASLQYMDGEVEQE 17
            SYW  G   + GD+VNVS+ +  G  V+ECG  + Y + E + +
Sbjct: 985  SYWKFGGEFEVGDKVNVSVRMPFGYYVKECGIRIVYEENEKDNQ 1028


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = -3

Query: 241  AKISNTTKGLTWIYNPMLVCKPKVGEDALWLSYWPIGNILDTGDEVNVSIIVGNGLMVRE 62
            AKI+N T    W Y+P     PK  E+ LWLS+W  G+ L+ GDEV++ + + +GL V++
Sbjct: 1042 AKINNKTICEKWTYSPTFYGMPKPLEEMLWLSHWTFGDQLEVGDEVHILVEMASGLTVKK 1101

Query: 61   CGASLQYMDGEVEQEKYETN 2
            CG  L Y +    QE  E++
Sbjct: 1102 CGIRLIYEEESTTQEIAESS 1121


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
 Frame = -3

Query: 310  GLNVTLLYRRLSGNEDEDMLV--LFAKISNTTKGLTWIYNPMLVCKPKVGEDALWLSYWP 137
            GLN+ ++Y   + N+  + L    + KI N TK L W Y+P+    P+  +  LWLS+W 
Sbjct: 1008 GLNICIVY---TCNDVRNGLTDHHYIKIWNKTKDLKWTYSPIFYGIPEPEKSMLWLSHWK 1064

Query: 136  IGNILDTGDEVNVSIIVGNGLMVRECGASLQYMDGEVEQEKYETN 2
            + ++L+ GD++NVS ++  G   +     L Y   + E E+ E N
Sbjct: 1065 LEDLLEGGDQLNVSAVMSTGYQAKNIRIHLVY---DQENEETELN 1106


Top