BLASTX nr result

ID: Atractylodes21_contig00013853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013853
         (1510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   437   e-120
ref|XP_002528699.1| transcription elongation factor s-II, putati...   425   e-116
ref|XP_004138392.1| PREDICTED: transcription elongation factor A...   421   e-115
emb|CBI18026.3| unnamed protein product [Vitis vinifera]              411   e-112
ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109

>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
            vinifera]
          Length = 367

 Score =  437 bits (1125), Expect = e-120
 Identities = 223/372 (59%), Positives = 268/372 (72%), Gaps = 3/372 (0%)
 Frame = +3

Query: 36   METELKELFEXXXXXXXXXXXXXXXXDSAPEEDRCIDALKALKKFPVNYQILVSTQVGKR 215
            ME EL ELFE                 + PE  RC+DALK LK FPV Y+ L STQVGKR
Sbjct: 1    MERELVELFESAKKAADAAATDGVS-SNGPEVGRCVDALKQLKSFPVTYEALASTQVGKR 59

Query: 216  LRQLTKHPRRKIQSLAAELVEIWKNIIVEETLKNKKNGSSDIKESSKSEHGPETSDKKIQ 395
            LR LTKHP+ KIQSLA++L+E+WK ++++ET +NKKNG  D   S+K+E   +T   K++
Sbjct: 60   LRHLTKHPKGKIQSLASDLLEMWKKVVIDET-RNKKNGGLDNNGSAKAEVS-KTETVKVE 117

Query: 396  ---RVNSIKVEKVSKTENVKVEKHGHSGIPSSXXXXXXXXXXXREHTEHVTKEENKQTSD 566
               +   +KVEK SK E VK+EK                     +  E+V  +E KQ S 
Sbjct: 118  MAHKAGGVKVEKASKVETVKIEKFDRGSSTKPGSVSRSETIKVEKRVENV--DERKQFSS 175

Query: 567  AKKPRPNNVGPPKLTSLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVA 746
             KKP   + GPPKLT+++ C D +RDK+RELL+EAL KV  E ++D++DEV+A DP RVA
Sbjct: 176  VKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVA 235

Query: 747  VSVESAMFEKWGRSNGAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMA 926
            VSVES MFEK GRSNG QKFKYRSIMFNIKDP NPD RRKVLLG VKP+R++ ++PEEMA
Sbjct: 236  VSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMA 295

Query: 927  STERQMENVKIKEKALFDCERGGPPKATTDQFKCGRCGKRKCTYYQLQTRSADEPMTTFV 1106
            S +RQ EN +IKEKALFDCERGGPPKATTDQFKCGRCG+RK TYYQLQTRSADEPMTTFV
Sbjct: 296  SNQRQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFV 355

Query: 1107 TCVNCDNHWKFC 1142
            TCVNC+NHWKFC
Sbjct: 356  TCVNCNNHWKFC 367


>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
            gi|223531871|gb|EEF33688.1| transcription elongation
            factor s-II, putative [Ricinus communis]
          Length = 342

 Score =  425 bits (1093), Expect = e-116
 Identities = 226/371 (60%), Positives = 262/371 (70%), Gaps = 2/371 (0%)
 Frame = +3

Query: 36   METELKELFEXXXXXXXXXXXXXXXXDSAPEEDRCIDALKALKKFPVNYQILVSTQVGKR 215
            ME EL ELFE                 + PE  RC+DALK LK FP++Y ILVS+QVGKR
Sbjct: 1    MERELVELFEAAKKAADAAASDGVS-SNGPEVVRCVDALKQLKIFPISYDILVSSQVGKR 59

Query: 216  LRQLTKHPRRKIQSLAAELVEIWKNIIVEETLKNKKNGSSDIKESSKSEHGPETSDKKIQ 395
            LR LTKHPR KIQ++A++L+E+WK I+++ET + KKNG+ D K S K+E         + 
Sbjct: 60   LRPLTKHPREKIQTVASDLLEMWKKIVIDETTR-KKNGTVDNKSSVKAE---------VS 109

Query: 396  RVNSIKVEKVSKTENVKVEKHGHSGIPSSXXXXXXXXXXXREHTEHVTK--EENKQTSDA 569
            +V +IKVEKV K   VKVEK                    RE T  V K  EE +Q  D 
Sbjct: 110  KVETIKVEKVQKASTVKVEK------------------IDRERTVKVEKKSEEKQQAIDV 151

Query: 570  KKPRPNNVGPPKLTSLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVAV 749
            KKP   +V PPKLT++V C D +RDKIRELL EAL KV  E  +D RDE+   DP RVAV
Sbjct: 152  KKPSQASVTPPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGRDEISKCDPIRVAV 211

Query: 750  SVESAMFEKWGRSNGAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMAS 929
            SVESAMFEK GRSNGAQKFKYRSIMFN+KDP NPD RRKVLLG VKPER++ +TPEEMAS
Sbjct: 212  SVESAMFEKMGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTPEEMAS 271

Query: 930  TERQMENVKIKEKALFDCERGGPPKATTDQFKCGRCGKRKCTYYQLQTRSADEPMTTFVT 1109
             ERQ E  +IKEKALFDCERGGP KATTDQFKC RCG+RKCTYYQ+QTRSADEPMTT+VT
Sbjct: 272  KERQEEINQIKEKALFDCERGGPAKATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVT 331

Query: 1110 CVNCDNHWKFC 1142
            CVNC+ HWKFC
Sbjct: 332  CVNCNKHWKFC 342


>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like [Cucumis
            sativus]
          Length = 369

 Score =  421 bits (1083), Expect = e-115
 Identities = 218/376 (57%), Positives = 264/376 (70%), Gaps = 7/376 (1%)
 Frame = +3

Query: 36   METELKELFEXXXXXXXXXXXXXXXXDSAPEEDRCIDALKALKKFPVNYQILVSTQVGKR 215
            ME EL ELFE                D   EE RC+DAL+ LKKFPV YQILVSTQVGKR
Sbjct: 1    MENELVELFEAAKKAADAAAAPSN--DGGAEESRCLDALRQLKKFPVTYQILVSTQVGKR 58

Query: 216  LRQLTKHPRRKIQSLAAELVEIWKNIIVEETLKNKKNGSSDIKESSK--SEHGPETSDKK 389
            LR LTKHP++KIQ  A++L+E+WK I+++ET KNKKNG++  K+S K  S        +K
Sbjct: 59   LRHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEK 118

Query: 390  IQRVNSIKVEKVSKTENVKVEKHGHSGIPSSXXXXXXXXXXXREHTEHVTKEEN-----K 554
             Q+ +S+KVE+VSK     VE+   +G  SS             ++  V K ++     +
Sbjct: 119  FQKSSSMKVERVSK-----VEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVER 173

Query: 555  QTSDAKKPRPNNVGPPKLTSLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDP 734
               + KKP      PPKLTS++  KD  RDKIRELL EA  KVPGE +++  DEV+ASDP
Sbjct: 174  VVKEEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDP 233

Query: 735  YRVAVSVESAMFEKWGRSNGAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTP 914
             RVAVSVES MFE WG S GAQK KYRSIMFN+KDPKNPDFRRKVLLG +KPER++ ++ 
Sbjct: 234  IRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMST 293

Query: 915  EEMASTERQMENVKIKEKALFDCERGGPPKATTDQFKCGRCGKRKCTYYQLQTRSADEPM 1094
             +MAS +R+ EN +I +KALFDCERGG PKATTDQFKCGRCG+RK TYYQLQTRSADEPM
Sbjct: 294  ADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPM 353

Query: 1095 TTFVTCVNCDNHWKFC 1142
            TTFVTCVNC+NHWKFC
Sbjct: 354  TTFVTCVNCNNHWKFC 369


>emb|CBI18026.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  411 bits (1057), Expect = e-112
 Identities = 215/369 (58%), Positives = 255/369 (69%)
 Frame = +3

Query: 36   METELKELFEXXXXXXXXXXXXXXXXDSAPEEDRCIDALKALKKFPVNYQILVSTQVGKR 215
            ME EL ELFE                 + PE  RC+DALK LK FPV Y+ L STQVGKR
Sbjct: 1    MERELVELFESAKKAADAAATDGVS-SNGPEVGRCVDALKQLKSFPVTYEALASTQVGKR 59

Query: 216  LRQLTKHPRRKIQSLAAELVEIWKNIIVEETLKNKKNGSSDIKESSKSEHGPETSDKKIQ 395
            LR LTKHP+ KIQSLA++L+E+WK ++++ET +NKKNG  D   S+K+E           
Sbjct: 60   LRHLTKHPKGKIQSLASDLLEMWKKVVIDET-RNKKNGGLDNNGSAKAE----------- 107

Query: 396  RVNSIKVEKVSKTENVKVEKHGHSGIPSSXXXXXXXXXXXREHTEHVTKEENKQTSDAKK 575
                    K SK E V+                        +  E+V  +E KQ S  KK
Sbjct: 108  --------KASKVETVE------------------------KRVENV--DERKQFSSVKK 133

Query: 576  PRPNNVGPPKLTSLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVAVSV 755
            P   + GPPKLT+++ C D +RDK+RELL+EAL KV  E ++D++DEV+A DP RVAVSV
Sbjct: 134  PPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSV 193

Query: 756  ESAMFEKWGRSNGAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMASTE 935
            ES MFEK GRSNG QKFKYRSIMFNIKDP NPD RRKVLLG VKP+R++ ++PEEMAS +
Sbjct: 194  ESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQ 253

Query: 936  RQMENVKIKEKALFDCERGGPPKATTDQFKCGRCGKRKCTYYQLQTRSADEPMTTFVTCV 1115
            RQ EN +IKEKALFDCERGGPPKATTDQFKCGRCG+RK TYYQLQTRSADEPMTTFVTCV
Sbjct: 254  RQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 313

Query: 1116 NCDNHWKFC 1142
            NC+NHWKFC
Sbjct: 314  NCNNHWKFC 322


>ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|222854232|gb|EEE91779.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  401 bits (1030), Expect = e-109
 Identities = 209/371 (56%), Positives = 262/371 (70%), Gaps = 2/371 (0%)
 Frame = +3

Query: 36   METELKELFEXXXXXXXXXXXXXXXXDSAPEEDRCIDALKALKKFPVNYQILVSTQVGKR 215
            ME E  ELF+                 S PE  RC+D+LK L+KF V  ++LVSTQVGK+
Sbjct: 1    MEMEFVELFDEAKKAADASLNDDVS-SSGPEVTRCVDSLKQLRKFKVTSELLVSTQVGKK 59

Query: 216  LRQLTKHPRRKIQSLAAELVEIWKNIIVEETLKNKKNGSSDIKESSKSEHGPETSDK--K 389
            LR L KHP+ KI+++A++L+E+WK ++++ET   KKNGS D K S K+E     + K  K
Sbjct: 60   LRPLAKHPKEKIRAVASDLLEMWKKMVIDET--RKKNGSIDSKSSVKAEVSKSETVKVEK 117

Query: 390  IQRVNSIKVEKVSKTENVKVEKHGHSGIPSSXXXXXXXXXXXREHTEHVTKEENKQTSDA 569
            +++ + +KVE+ S +E VKVEK                        E ++K+E  QTS  
Sbjct: 118  LRKTSVVKVERASTSETVKVEKMDQDKTVK---------------VEKMSKQEI-QTSSV 161

Query: 570  KKPRPNNVGPPKLTSLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVAV 749
            K+P  + +GPPKL +LV C D +RDKIRELL+EAL KV  E ++D+RDEV+A DP RVAV
Sbjct: 162  KQPSQSPIGPPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAV 221

Query: 750  SVESAMFEKWGRSNGAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMAS 929
            SVES MFEK GRSNGAQK KYRSIMFNIKD  NPDFRRKVLLG V+PER++ + PEEMAS
Sbjct: 222  SVESMMFEKLGRSNGAQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMAS 281

Query: 930  TERQMENVKIKEKALFDCERGGPPKATTDQFKCGRCGKRKCTYYQLQTRSADEPMTTFVT 1109
             +R+ EN +IKEK LFDCER G  +ATTDQFKCGRC +RKCTYYQ+QTRSADEPMTT+VT
Sbjct: 282  EQRKRENNQIKEKVLFDCERSGQAQATTDQFKCGRCRQRKCTYYQMQTRSADEPMTTYVT 341

Query: 1110 CVNCDNHWKFC 1142
            CVNC+NHWKFC
Sbjct: 342  CVNCNNHWKFC 352


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