BLASTX nr result

ID: Atractylodes21_contig00013832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013832
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ83992.1| unknown [Medicago truncatula] gi|388511479|gb|AFK...    82   1e-13
ref|XP_003616293.1| HMG-Y-related protein A [Medicago truncatula...    81   3e-13
emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1...    79   1e-12
ref|XP_002305213.1| high mobility group family [Populus trichoca...    79   1e-12
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...    78   2e-12

>gb|ACJ83992.1| unknown [Medicago truncatula] gi|388511479|gb|AFK43801.1| unknown
           [Medicago truncatula]
          Length = 193

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
 Frame = -2

Query: 675 QMIIEAVDGMKQKEGSNKLSIINYIESTHGDXXXXXXXXXXXXXXXXKDSGDLVFLRNNY 496
           +MI++A++ + +  GSNK SI NYIES +G+                KD+GDLVF +NNY
Sbjct: 17  EMIMKALEALNEPNGSNKSSISNYIESIYGELPEGHSIVLANHLNQMKDNGDLVFAKNNY 76

Query: 495 MRPDLASPLTRGHGRRPKPKDP------AALEAQAQPESGSEVKRRSGR 367
           M+PD  +P  RG GR PKPKDP      A L   A P++        GR
Sbjct: 77  MKPDPNAPPKRGRGRPPKPKDPLAPPPAAVLSPNAPPKTPKPASSGRGR 125


>ref|XP_003616293.1| HMG-Y-related protein A [Medicago truncatula]
           gi|217071498|gb|ACJ84109.1| unknown [Medicago
           truncatula] gi|355517628|gb|AES99251.1| HMG-Y-related
           protein A [Medicago truncatula]
           gi|388515525|gb|AFK45824.1| unknown [Medicago
           truncatula]
          Length = 204

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 40/84 (47%), Positives = 53/84 (63%)
 Frame = -2

Query: 675 QMIIEAVDGMKQKEGSNKLSIINYIESTHGDXXXXXXXXXXXXXXXXKDSGDLVFLRNNY 496
           +MI++A++ + +  GSNK SI NYIES +G+                KD+GDLVF +NNY
Sbjct: 17  EMIMKALEALNEPNGSNKSSISNYIESIYGELPEGHSIVLANHLNQMKDNGDLVFAKNNY 76

Query: 495 MRPDLASPLTRGHGRRPKPKDPAA 424
           M+PD  +P  RG GR PKPKDP A
Sbjct: 77  MKPDPNAPPKRGRGRPPKPKDPLA 100


>emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1| HMG-I/Y [Pisum
           sativum]
          Length = 197

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 42/103 (40%), Positives = 57/103 (55%)
 Frame = -2

Query: 675 QMIIEAVDGMKQKEGSNKLSIINYIESTHGDXXXXXXXXXXXXXXXXKDSGDLVFLRNNY 496
           ++I++A+D + +  GSNK +I NYIES +G+                K+SGDLVF +NNY
Sbjct: 17  ELILKAIDSLNEPNGSNKSAISNYIESVYGELPEGHSVVLLYHLNQMKESGDLVFAKNNY 76

Query: 495 MRPDLASPLTRGHGRRPKPKDPAALEAQAQPESGSEVKRRSGR 367
           +RPD  +P  RG GR PK KDP A    + P       R  GR
Sbjct: 77  LRPDPNAPPKRGRGRPPKAKDPLA----SPPSGAVSTPRPRGR 115


>ref|XP_002305213.1| high mobility group family [Populus trichocarpa]
           gi|222848177|gb|EEE85724.1| high mobility group family
           [Populus trichocarpa]
          Length = 189

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 40/91 (43%), Positives = 51/91 (56%)
 Frame = -2

Query: 675 QMIIEAVDGMKQKEGSNKLSIINYIESTHGDXXXXXXXXXXXXXXXXKDSGDLVFLRNNY 496
           +MI  A+  + +  GSNK SI  YIES HG+                 D+G+L+FL+NNY
Sbjct: 17  EMIWSAIAALNETGGSNKTSISKYIESKHGNLPAGHTALLAHHLNRMTDTGELMFLKNNY 76

Query: 495 MRPDLASPLTRGHGRRPKPKDPAALEAQAQP 403
           M+PD  +P  RG GR PKPKDP A  A   P
Sbjct: 77  MKPDPNAPPRRGRGRPPKPKDPLAPPADLAP 107


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 38/82 (46%), Positives = 52/82 (63%)
 Frame = -2

Query: 675 QMIIEAVDGMKQKEGSNKLSIINYIESTHGDXXXXXXXXXXXXXXXXKDSGDLVFLRNNY 496
           +M+++A+D + +  GSNK +I  YIEST+G+                KDSG+LVFL+NNY
Sbjct: 17  EMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHLNKMKDSGELVFLKNNY 76

Query: 495 MRPDLASPLTRGHGRRPKPKDP 430
           M+PD  +P  RG GR PKPK P
Sbjct: 77  MKPDPNAPPKRGRGRPPKPKVP 98


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