BLASTX nr result

ID: Atractylodes21_contig00013782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00013782
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299952.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_002513176.1| conserved hypothetical protein [Ricinus comm...   177   2e-42
ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like prote...   173   2e-41
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote...   172   4e-41
gb|AFK41594.1| unknown [Medicago truncatula]                          172   4e-41

>ref|XP_002299952.1| predicted protein [Populus trichocarpa]
           gi|224104033|ref|XP_002313290.1| predicted protein
           [Populus trichocarpa] gi|118483640|gb|ABK93714.1|
           unknown [Populus trichocarpa]
           gi|222847210|gb|EEE84757.1| predicted protein [Populus
           trichocarpa] gi|222849698|gb|EEE87245.1| predicted
           protein [Populus trichocarpa]
          Length = 99

 Score =  177 bits (449), Expect = 2e-42
 Identities = 96/127 (75%), Positives = 98/127 (77%)
 Frame = -1

Query: 587 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 408
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 60

Query: 407 TDQTRRLGLIVCRGTAVMLVSPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEIANP 228
           TDQTRRLGLIVCRGTAVMLVSPTD                            GT+EIANP
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTD----------------------------GTDEIANP 92

Query: 227 FIQQDGA 207
           F+Q DGA
Sbjct: 93  FVQPDGA 99


>ref|XP_002513176.1| conserved hypothetical protein [Ricinus communis]
           gi|223547674|gb|EEF49167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  177 bits (448), Expect = 2e-42
 Identities = 96/127 (75%), Positives = 98/127 (77%)
 Frame = -1

Query: 587 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 408
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE+LRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYLRDPDDPLKT 60

Query: 407 TDQTRRLGLIVCRGTAVMLVSPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEIANP 228
           TDQTRRLGLIVCRGTAVMLVSPTD                            GT+EIANP
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTD----------------------------GTDEIANP 92

Query: 227 FIQQDGA 207
           FIQQDGA
Sbjct: 93  FIQQDGA 99


>ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Vitis vinifera] gi|359487265|ref|XP_003633552.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Vitis vinifera]
           gi|359487267|ref|XP_003633553.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 3
           [Vitis vinifera] gi|359487269|ref|XP_003633554.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 4 [Vitis vinifera]
          Length = 99

 Score =  173 bits (439), Expect = 2e-41
 Identities = 95/127 (74%), Positives = 96/127 (75%)
 Frame = -1

Query: 587 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 408
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDP KT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKT 60

Query: 407 TDQTRRLGLIVCRGTAVMLVSPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEIANP 228
           TDQTRRLGLIVCRGTAVMLVSPTD                            GT+EIANP
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTD----------------------------GTDEIANP 92

Query: 227 FIQQDGA 207
           FIQ DGA
Sbjct: 93  FIQPDGA 99


>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
           max]
          Length = 99

 Score =  172 bits (437), Expect = 4e-41
 Identities = 94/127 (74%), Positives = 96/127 (75%)
 Frame = -1

Query: 587 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 408
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 407 TDQTRRLGLIVCRGTAVMLVSPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEIANP 228
           TDQTR LGLIVCRGTAVMLVSPTD                            GT+EIANP
Sbjct: 61  TDQTRNLGLIVCRGTAVMLVSPTD----------------------------GTDEIANP 92

Query: 227 FIQQDGA 207
           FIQ DG+
Sbjct: 93  FIQPDGS 99


>gb|AFK41594.1| unknown [Medicago truncatula]
          Length = 99

 Score =  172 bits (437), Expect = 4e-41
 Identities = 94/127 (74%), Positives = 96/127 (75%)
 Frame = -1

Query: 587 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 408
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 407 TDQTRRLGLIVCRGTAVMLVSPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEIANP 228
           TDQTR LGLIVCRGTAVMLVSPTD                            GT+EIANP
Sbjct: 61  TDQTRSLGLIVCRGTAVMLVSPTD----------------------------GTDEIANP 92

Query: 227 FIQQDGA 207
           F+Q DGA
Sbjct: 93  FLQPDGA 99


Top